3ljl - Revision history

OCA at 07:10, 2 January 2019

2019-01-02T07:10:59Z

←Older revision		Revision as of 07:10, 2 January 2019
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lj/3ljl_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lj/3ljl_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 03:31, 5 August 2016

2016-08-05T03:31:59Z

←Older revision		Revision as of 03:31, 5 August 2016
Line 1:		Line 1:
		+
	==The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.==		==The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.==
	<StructureSection load='3ljl' size='340' side='right' caption='[[3ljl]], [[Resolution\|resolution]] 3.20Å' scene=''>		<StructureSection load='3ljl' size='340' side='right' caption='[[3ljl]], [[Resolution\|resolution]] 3.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ljl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Vibrio_parahaemolyticus Vibrio parahaemolyticus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ljl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LJL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VPA0420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~670 Vibrio parahaemolyticus~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VPA0420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ljl RCSB], [http://www.ebi.ac.uk/pdbsum/3ljl PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljl OCA], [http://pdbe.org/3ljl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ljl RCSB], [http://www.ebi.ac.uk/pdbsum/3ljl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ljl ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ljl ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Vibrio parahaemolyticus~~]]	+	[[Category: Vibpa]]
	[[Category: Gu, M]]		[[Category: Gu, M]]
	[[Category: Joachimiak, A]]		[[Category: Joachimiak, A]]

OCA at 15:30, 18 December 2014

2014-12-18T15:30:06Z

←Older revision		Revision as of 15:30, 18 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3ljl\| PDB=3ljl \| SCENE= }}~~	+	==The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.==
-	===The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.===	+	<StructureSection load='3ljl' size='340' side='right' caption='[[3ljl]], [[Resolution\|resolution]] 3.20Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3ljl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LJL FirstGlance]. <br>
-	[[3ljl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">VPA0420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 Vibrio parahaemolyticus])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ljl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ljl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ljl RCSB], [http://www.ebi.ac.uk/pdbsum/3ljl PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lj/3ljl_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Vibrio parahaemolyticus]]		[[Category: Vibrio parahaemolyticus]]
-	[[Category: Gu, M.]]	+	[[Category: Gu, M]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Tan, K.]]	+	[[Category: Tan, K]]
	[[Category: Dna-binding]]		[[Category: Dna-binding]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: ~~Midwest center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2]]~~	+
-	~~[[Category: Structural genomic~~]]	+
	[[Category: Transcription regulator]]		[[Category: Transcription regulator]]

OCA: Protected "3ljl" [edit=sysop:move=sysop]

2013-04-04T20:22:04Z

Protected "3ljl" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:22, 4 April 2013

OCA at 20:22, 4 April 2013

2013-04-04T20:22:02Z

←Older revision		Revision as of 20:22, 4 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3ljl.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ljl", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ljl\| PDB=3ljl \| SCENE= }}		{{STRUCTURE_3ljl\| PDB=3ljl \| SCENE= }}
-
	===The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.===		===The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.===
-

	==About this Structure==		==About this Structure==
-	~~3LJL~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA].	+	[[3ljl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA].
	[[Category: Vibrio parahaemolyticus]]		[[Category: Vibrio parahaemolyticus]]
	[[Category: Gu, M.]]		[[Category: Gu, M.]]
Line 27:		Line 16:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transcription regulator]]		[[Category: Transcription regulator]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 10 18:02:26 2010''

OCA at 16:02, 10 February 2010

2010-02-10T16:02:27Z

←Older revision		Revision as of 16:02, 10 February 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3ljl.jpg\|left\|200px]]

-	The ~~entry 3ljl~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ljl", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ljl\| PDB=3ljl \| SCENE= }}

-	~~Authors: Tan, K~~.~~, Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)~~	+	===The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.===

-	Description: The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb ~~3 09~~:20:25 2010''	+	==About this Structure==
		+	3LJL is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LJL OCA].
		+	[[Category: Vibrio parahaemolyticus]]
		+	[[Category: Gu, M.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: MCSG, Midwest Center for Structural Genomics.]]
		+	[[Category: Tan, K.]]
		+	[[Category: Dna-binding]]
		+	[[Category: Mcsg]]
		+	[[Category: Midwest center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transcription regulator]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 10 18:02:26 2010''

OCA: New page: '''Unreleased structure''' The entry 3ljl is ON HOLD Authors: Tan, K., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: The crystal structure of the f...

2010-02-03T07:20:25Z

New page: '''Unreleased structure''' The entry 3ljl is ON HOLD Authors: Tan, K., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG) Description: The crystal structure of the f...

New page

'''Unreleased structure'''

The entry 3ljl is ON HOLD

Authors: Tan, K., Gu, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Description: The crystal structure of the full-length transcriptional regulator LuxT from Vibrio parahaemolyticus RIMD 2210633.

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 3 09:20:25 2010''