3lv1 - Revision history

OCA: Replacing page with 'REMOVED: The PDB entry 3lv1 was removed.'

2017-01-18T16:06:08Z

Replacing page with 'REMOVED: The PDB entry 3lv1 was removed.'

←Older revision		Revision as of 16:06, 18 January 2017
Line 1:		Line 1:
-		+	REMOVED: The PDB entry 3lv1 was removed.
-	~~==Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+==~~	+
-	~~<StructureSection load='3lv1' size='340' side='right' caption='[[3lv1]], [[Resolution\|resolution]] 2.50Å' scene=''>~~	+
-	~~== Structural highlights ==~~	+
-	~~<table><tr><td colspan='2'>[[3lv1]] is a 4 chain structure with sequence from [http~~://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV1 FirstGlance]. <br>	+
-	~~</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>~~	+
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3lns\|3lns]]</td></tr>~~	+
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mdlD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 "Bacillus fluorescens putidus" Flugge 1886])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aldehyde_dehydrogenase_(NAD(P)(+)) Aldehyde dehydrogenase (NAD(P)(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.5 1.2.1.5] </span></td></tr>	+
-	~~<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=~~3lv1 ~~FirstGlance], [http://oca~~.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://pdbe.org/3lv1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv1 ProSAT]</span></td></tr>	+
-	~~</table>~~	+
-	~~== Function ==~~	+
-	[[http://www.uniprot.org/uniprot/MDLD_PSEPU MDLD_PSEPU]] NAD or NADP-dependent benzaldehyde dehydrogenase that catalyzes the conversion of benzaldehyde into benzoate in the (R)-mandelate degradation pathway.<ref>PMID:12670968</ref>	+
-		+
-	~~==See Also==~~	+
-	*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]	+
-	~~== References ==~~	+
-	~~<references/>~~	+
-	~~__TOC__~~	+
-	~~</StructureSection>~~	+
-	~~[[Category: Bacillus fluorescens putidus flugge 1886]]~~	+
-	~~[[Category: Zahniser, M P.D]]~~	+
-	~~[[Category: Class 3 aldehyde dehydrogenase]]~~	+
-	~~[[Category: Dehydrogenase]]~~	+
-	~~[[Category: Mandelate racemase pathway]]~~	+
-	~~[[Category: Nadp+]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+

OCA at 10:27, 5 August 2016

2016-08-05T10:27:42Z

←Older revision		Revision as of 10:27, 5 August 2016
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		+
	==Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+==		==Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+==
	<StructureSection load='3lv1' size='340' side='right' caption='[[3lv1]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='3lv1' size='340' side='right' caption='[[3lv1]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Pseudomonas_putida Pseudomonas putida~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_fluorescens_putidus"_flugge_1886 "bacillus fluorescens putidus" flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV1 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3lns\|3lns]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3lns\|3lns]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mdlD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 ~~Pseudomonas putida~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mdlD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 "Bacillus fluorescens putidus" Flugge 1886])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aldehyde_dehydrogenase_(NAD(P)(+)) Aldehyde dehydrogenase (NAD(P)(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.5 1.2.1.5] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aldehyde_dehydrogenase_(NAD(P)(+)) Aldehyde dehydrogenase (NAD(P)(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.5 1.2.1.5] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://pdbe.org/3lv1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lv1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~Q84DC3_PSEPU Q84DC3_PSEPU~~]] NAD or NADP-dependent benzaldehyde dehydrogenase that catalyzes the conversion of benzaldehyde into benzoate in the (R)-mandelate degradation pathway.<ref>PMID:12670968</ref>	+	[[http://www.uniprot.org/uniprot/MDLD_PSEPU MDLD_PSEPU]] NAD or NADP-dependent benzaldehyde dehydrogenase that catalyzes the conversion of benzaldehyde into benzoate in the (R)-mandelate degradation pathway.<ref>PMID:12670968</ref>

	==See Also==		==See Also==
Line 18:		Line 19:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Pseudomonas putida~~]]	+	[[Category: Bacillus fluorescens putidus flugge 1886]]
	[[Category: Zahniser, M P.D]]		[[Category: Zahniser, M P.D]]
	[[Category: Class 3 aldehyde dehydrogenase]]		[[Category: Class 3 aldehyde dehydrogenase]]

OCA at 01:36, 25 December 2014

2014-12-25T01:36:19Z

←Older revision		Revision as of 01:36, 25 December 2014
Line 9:		Line 9:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q84DC3_PSEPU Q84DC3_PSEPU]] NAD or NADP-dependent benzaldehyde dehydrogenase that catalyzes the conversion of benzaldehyde into benzoate in the (R)-mandelate degradation pathway.<ref>PMID:12670968</ref>

	==See Also==		==See Also==
	*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]		*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 10:06, 9 December 2014

2014-12-09T10:06:39Z

←Older revision		Revision as of 10:06, 9 December 2014
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-	~~[[Image:3lv1.png\|left\|200px]]~~	+	==Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+==
-		+	<StructureSection load='3lv1' size='340' side='right' caption='[[3lv1]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~{{STRUCTURE_3lv1\| PDB=3lv1 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LV1 FirstGlance]. <br>
-	===Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3lns\|3lns]]</td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">mdlD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=303 Pseudomonas putida])</td></tr>
-	==~~About this Structure~~==	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aldehyde_dehydrogenase_(NAD(P)(+)) Aldehyde dehydrogenase (NAD(P)(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.5 1.2.1.5] </span></td></tr>
-	[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lv1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lv1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lv1 RCSB], [http://www.ebi.ac.uk/pdbsum/3lv1 PDBsum]</span></td></tr>
		+	</table>

	==See Also==		==See Also==
	*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]		*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Pseudomonas putida]]		[[Category: Pseudomonas putida]]
-	[[Category: Zahniser, M P.D.]]	+	[[Category: Zahniser, M P.D]]
	[[Category: Class 3 aldehyde dehydrogenase]]		[[Category: Class 3 aldehyde dehydrogenase]]
	[[Category: Dehydrogenase]]		[[Category: Dehydrogenase]]

OCA at 11:12, 20 October 2012

2012-10-20T11:12:30Z

←Older revision		Revision as of 11:12, 20 October 2012
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	==About this Structure==		==About this Structure==
-	[[3lv1]] is a 4 chain structure ~~of [[Aldehyde dehydrogenase]]~~ with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].	+	[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].

	==See Also==		==See Also==

OCA at 04:35, 26 July 2012

2012-07-26T04:35:17Z

←Older revision		Revision as of 04:35, 26 July 2012
Line 1:		Line 1:
-	[[Image:3lv1.~~jpg~~\|left\|200px]]	+	[[Image:3lv1.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3lv1", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3lv1\| PDB=3lv1 \| SCENE= }}		{{STRUCTURE_3lv1\| PDB=3lv1 \| SCENE= }}

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	==About this Structure==		==About this Structure==
-	[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].	+	[[3lv1]] is a 4 chain structure of [[Aldehyde dehydrogenase]] with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].
		+
		+	==See Also==
		+	*[[Aldehyde dehydrogenase\|Aldehyde dehydrogenase]]
	[[Category: Pseudomonas putida]]		[[Category: Pseudomonas putida]]
	[[Category: Zahniser, M P.D.]]		[[Category: Zahniser, M P.D.]]
		+	[[Category: Class 3 aldehyde dehydrogenase]]
		+	[[Category: Dehydrogenase]]
		+	[[Category: Mandelate racemase pathway]]
		+	[[Category: Nadp+]]
		+	[[Category: Oxidoreductase]]

OCA: Protected "3lv1" [edit=sysop:move=sysop]

2011-03-02T07:04:22Z

Protected "3lv1" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:04, 2 March 2011

OCA at 07:04, 2 March 2011

2011-03-02T07:04:18Z

←Older revision		Revision as of 07:04, 2 March 2011
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-	~~'''Unreleased structure'''~~	+	[[Image:3lv1.jpg\|left\|200px]]

-	The ~~entry 3lv1~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3lv1", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3lv1\| PDB=3lv1 \| SCENE= }}

-	~~Authors: Zahniser~~, ~~M.P.D.~~	+	===Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+===

-	Description: Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Wed Mar 17 09~~:11:~~50 2010''~~	+	==About this Structure==
		+	[[3lv1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LV1 OCA].
		+	[[Category: Pseudomonas putida]]
		+	[[Category: Zahniser, M P.D.]]

OCA at 07:11, 17 March 2010

2010-03-17T07:11:51Z

←Older revision		Revision as of 07:11, 17 March 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3lv1 is ON HOLD	+	The entry 3lv1 is ON HOLD until Paper Publication

	Authors: Zahniser, M.P.D.		Authors: Zahniser, M.P.D.
Line 7:		Line 7:
	Description: Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+		Description: Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar ~~3 15~~:29:24 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 17 09:11:50 2010''

OCA at 13:29, 3 March 2010

2010-03-03T13:29:24Z

←Older revision		Revision as of 13:29, 3 March 2010
Line 3:		Line 3:
	The entry 3lv1 is ON HOLD		The entry 3lv1 is ON HOLD

-	Authors: Zahniser, M.P.~~D., Yeung, C., McLeish, M.J., Petsko, G.A., Ringe,~~ D.	+	Authors: Zahniser, M.P.D.

	Description: Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+		Description: Benzaldehyde Dehydrogenase, a Class 3 Aldehyde Dehydrogenase, with bound NADP+

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu Feb 25 13~~:06:20 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 3 15:29:24 2010''