3mlp - Revision history

OCA at 16:35, 1 November 2023

2023-11-01T16:35:24Z

←Older revision		Revision as of 16:35, 1 November 2023
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	<StructureSection load='3mlp' size='340' side='right'caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='3mlp' size='340' side='right'caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3mlp]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MLP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3mlp]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MLP FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>~~, ~~<scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.8Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[3mln\|3mln]], [[3mlo\|3mlo]]~~</~~div~~><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">Ebf1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [https://pdbe.org/3mlp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [https://www.ebi.ac.uk/pdbsum/3mlp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlp ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [https://pdbe.org/3mlp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [https://www.ebi.ac.uk/pdbsum/3mlp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>	+	[https://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lk3 transgenic mice~~]]	+	[[Category: Mus musculus]]
-	[[Category: Grosschedl, R]]	+	[[Category: Synthetic construct]]
-	[[Category: Treiber, N]]	+	[[Category: Grosschedl R]]
-	[[Category: Treiber, T]]	+	[[Category: Treiber N]]
-	[[Category: Zocher, G]]	+	[[Category: Treiber T]]
-	~~[[Category: Dna]]~~	+	[[Category: Zocher G]]
-	~~[[Category: Ebf]]~~	+
-	~~[[Category: Ebf-1]]~~	+
-	~~[[Category: Helix-loop-helix]]~~	+
-	~~[[Category: Ipt-domain]]~~	+
-	~~[[Category: Pseudo-ig-fold]]~~	+
-	~~[[Category: Tig-domain]]~~	+
-	~~[[Category: Transcription factor]]~~	+
-	~~[[Category: Transcription-dna complex]]~~	+
-	~~[[Category: Zinc-finger]]~~	+
-	~~[[Category: Zinc-knuckle~~]]	+

OCA at 13:48, 4 May 2022

2022-05-04T13:48:13Z

←Older revision		Revision as of 13:48, 4 May 2022
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	==Early B-cell Factor 1 (Ebf1) bound to DNA==		==Early B-cell Factor 1 (Ebf1) bound to DNA==
-	<StructureSection load='3mlp' size='340' side='right' caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>	+	<StructureSection load='3mlp' size='340' side='right'caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3mlp]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3MLP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3mlp]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MLP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3mln\|3mln]], [[3mlo\|3mlo]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [~~http~~://pdbe.org/3mlp PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3mlp PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlp ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [https://pdbe.org/3mlp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [https://www.ebi.ac.uk/pdbsum/3mlp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>	+	[[https://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 24:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]
	[[Category: Grosschedl, R]]		[[Category: Grosschedl, R]]

OCA at 13:24, 16 January 2019

2019-01-16T13:24:11Z

←Older revision		Revision as of 13:24, 16 January 2019
Line 1:		Line 1:
		+
	==Early B-cell Factor 1 (Ebf1) bound to DNA==		==Early B-cell Factor 1 (Ebf1) bound to DNA==
	<StructureSection load='3mlp' size='340' side='right' caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='3mlp' size='340' side='right' caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [http://pdbe.org/3mlp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [http://www.ebi.ac.uk/pdbsum/3mlp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [http://pdbe.org/3mlp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [http://www.ebi.ac.uk/pdbsum/3mlp PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mlp ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 06:21, 23 December 2015

2015-12-23T06:21:52Z

←Older revision		Revision as of 06:21, 23 December 2015
Line 6:		Line 6:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [http://www.ebi.ac.uk/pdbsum/3mlp PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [http://pdbe.org/3mlp PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [http://www.ebi.ac.uk/pdbsum/3mlp PDBsum]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3mlp" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 29:
	[[Category: Zocher, G]]		[[Category: Zocher, G]]
	[[Category: Dna]]		[[Category: Dna]]
		+	[[Category: Ebf]]
		+	[[Category: Ebf-1]]
	[[Category: Helix-loop-helix]]		[[Category: Helix-loop-helix]]
	[[Category: Ipt-domain]]		[[Category: Ipt-domain]]

OCA at 15:21, 24 December 2014

2014-12-24T15:21:32Z

←Older revision		Revision as of 15:21, 24 December 2014
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-	~~{{STRUCTURE_3mlp\| PDB=3mlp \| SCENE= }}~~	+	==Early B-cell Factor 1 (Ebf1) bound to DNA==
-	===Early B-cell Factor 1 (Ebf1) bound to DNA===	+	<StructureSection load='3mlp' size='340' side='right' caption='[[3mlp]], [[Resolution\|resolution]] 2.80Å' scene=''>
-	~~{{ABSTRACT_PUBMED_20876732}}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3mlp]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MLP FirstGlance]. <br>
-	==Function==	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3mln\|3mln]], [[3mlo\|3mlo]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Ebf1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mlp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mlp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mlp RCSB], [http://www.ebi.ac.uk/pdbsum/3mlp PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>		[[http://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Early B-cell factor 1 (Ebf1) is a key transcriptional determinant of B-lymphocyte differentiation whose DNA-binding domain has no sequence similarity to other transcription factor families. Here we report the crystal structure of an Ebf1 dimer bound to its palindromic recognition site. The DNA-binding domain adopts a pseudoimmunoglobulin-like fold with novel topology, but is structurally similar to the Rel homology domains of NFAT and NF-kappaB. Ebf1 contacts the DNA with two loop-based modules and a unique Zn coordination motif whereby each Ebf1 monomer interacts with both palindromic half-sites. This unusual mode of DNA recognition generates an extended contact area that may be crucial for the function of Ebf1 in chromatin.

-	~~==About this~~ Structure==	+	Structure of an Ebf1:DNA complex reveals unusual DNA recognition and structural homology with Rel proteins.,Treiber N, Treiber T, Zocher G, Grosschedl R Genes Dev. 2010 Oct 15;24(20):2270-5. Epub 2010 Sep 28. PMID:20876732<ref>PMID:20876732</ref>
-	~~[[3mlp]] is a 8 chain structure~~ with ~~sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http~~:~~//oca~~.~~weizmann~~.~~ac.il~~/~~oca-bin/ocashort?id=3MLP OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:020876732</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Lk3 transgenic mice]]		[[Category: Lk3 transgenic mice]]
-	[[Category: Grosschedl, R.]]	+	[[Category: Grosschedl, R]]
-	[[Category: Treiber, N.]]	+	[[Category: Treiber, N]]
-	[[Category: Treiber, T.]]	+	[[Category: Treiber, T]]
-	[[Category: Zocher, G.]]	+	[[Category: Zocher, G]]
	[[Category: Dna]]		[[Category: Dna]]
	[[Category: Helix-loop-helix]]		[[Category: Helix-loop-helix]]

OCA at 03:21, 13 February 2014

2014-02-13T03:21:39Z

←Older revision		Revision as of 03:21, 13 February 2014
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3mlp]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Mus_musculus Mus musculus~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA].	+	[[3mlp]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA].

	==Reference==		==Reference==
	<ref group="xtra">PMID:020876732</ref><references group="xtra"/><references/>		<ref group="xtra">PMID:020876732</ref><references group="xtra"/><references/>
-	[[Category: ~~Mus musculus~~]]	+	[[Category: Lk3 transgenic mice]]
	[[Category: Grosschedl, R.]]		[[Category: Grosschedl, R.]]
	[[Category: Treiber, N.]]		[[Category: Treiber, N.]]

OCA: Protected "3mlp" [edit=sysop:move=sysop]

2013-04-17T20:47:19Z

Protected "3mlp" [edit=sysop:move=sysop]

←Older revision

Revision as of 20:47, 17 April 2013

OCA at 20:47, 17 April 2013

2013-04-17T20:47:17Z

←Older revision		Revision as of 20:47, 17 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3mlp.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3mlp", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
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	{{STRUCTURE_3mlp\| PDB=3mlp \| SCENE= }}		{{STRUCTURE_3mlp\| PDB=3mlp \| SCENE= }}
-
	===Early B-cell Factor 1 (Ebf1) bound to DNA===		===Early B-cell Factor 1 (Ebf1) bound to DNA===
		+	{{ABSTRACT_PUBMED_20876732}}

-		+	==Function==
-	~~<!--~~	+	[[http://www.uniprot.org/uniprot/COE1_MOUSE COE1_MOUSE]] Transcriptional activator which recognizes variations of the palindromic sequence 5'-ATTCCCNNGGGAATT-3'.<ref>PMID:20876732</ref>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_20876732}}, adds the Publication Abstract to the page~~	+
-	~~(as it appears on PubMed at~~ http://www.~~pubmed~~.~~gov), where 20876732 is~~ the ~~PubMed ID number.~~	+
-	-->	+
-	~~{{ABSTRACT_PUBMED_20876732}}~~	+

	==About this Structure==		==About this Structure==
-	~~3MLP~~ is a 8 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA].	+	[[3mlp]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA].

	==Reference==		==Reference==
-	<ref group="xtra">PMID:~~20876732~~</ref><references group="xtra"/>	+	<ref group="xtra">PMID:020876732</ref><references group="xtra"/><references/>
	[[Category: Mus musculus]]		[[Category: Mus musculus]]
	[[Category: Grosschedl, R.]]		[[Category: Grosschedl, R.]]
Line 38:		Line 25:
	[[Category: Zinc-finger]]		[[Category: Zinc-finger]]
	[[Category: Zinc-knuckle]]		[[Category: Zinc-knuckle]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 1 11:31:18 2010''

OCA at 08:19, 1 December 2010

2010-12-01T08:19:32Z

←Older revision		Revision as of 08:19, 1 December 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3mlp.jpg\|left\|200px]]

-	The ~~entry 3mlp~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3mlp", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3mlp\| PDB=3mlp \| SCENE= }}

-	~~Authors: Treiber, N., Treiber, T., Zocher, G., Grosschedl, R.~~	+	===Early B-cell Factor 1 (Ebf1) bound to DNA===

-	Description: Early B-cell Factor 1 (Ebf1) bound to DNA

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Thu May 20 09~~:17:39 2010''	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_20876732}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 20876732 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_20876732}}
		+
		+	==About this Structure==
		+	3MLP is a 8 chains structure with sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MLP OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:20876732</ref><references group="xtra"/>
		+	[[Category: Mus musculus]]
		+	[[Category: Grosschedl, R.]]
		+	[[Category: Treiber, N.]]
		+	[[Category: Treiber, T.]]
		+	[[Category: Zocher, G.]]
		+	[[Category: Dna]]
		+	[[Category: Helix-loop-helix]]
		+	[[Category: Ipt-domain]]
		+	[[Category: Pseudo-ig-fold]]
		+	[[Category: Tig-domain]]
		+	[[Category: Transcription factor]]
		+	[[Category: Transcription-dna complex]]
		+	[[Category: Zinc-finger]]
		+	[[Category: Zinc-knuckle]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 1 11:31:18 2010''

OCA at 06:17, 20 May 2010

2010-05-20T06:17:39Z

←Older revision		Revision as of 06:17, 20 May 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3mlp is ON HOLD	+	The entry 3mlp is ON HOLD until Paper Publication

	Authors: Treiber, N., Treiber, T., Zocher, G., Grosschedl, R.		Authors: Treiber, N., Treiber, T., Zocher, G., Grosschedl, R.
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	Description: Early B-cell Factor 1 (Ebf1) bound to DNA		Description: Early B-cell Factor 1 (Ebf1) bound to DNA

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed~~ May ~~5 11~~:40:15 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu May 20 09:17:39 2010''