3nfb - Revision history

OCA at 09:14, 6 September 2023

2023-09-06T09:14:23Z

←Older revision		Revision as of 09:14, 6 September 2023
Line 3:		Line 3:
	<StructureSection load='3nfb' size='340' side='right'caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>		<StructureSection load='3nfb' size='340' side='right'caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ccug_52537 Ccug 52537~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.85Å</td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</div></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 CCUG 52537])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [https://pdbe.org/3nfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [https://www.ebi.ac.uk/pdbsum/3nfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [https://pdbe.org/3nfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [https://www.ebi.ac.uk/pdbsum/3nfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/BAPA_SPHXN BAPA_SPHXN]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>	+	[https://www.uniprot.org/uniprot/BAPA_SPHXN BAPA_SPHXN] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>

	==See Also==		==See Also==
Line 18:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Ccug 52537]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Geueke, B]]	+	[[Category: Sphingosinicella xenopeptidilytica]]
-	[[Category: Gruetter~~, M G~~]]	+	[[Category: Geueke B]]
-	[[Category: Heck, T]]	+	[[Category: Gruetter MG]]
-	[[Category: Kohler, H ~~P.E~~]]	+	[[Category: Heck T]]
-	[[Category: Merz, T]]	+	[[Category: Kohler H-PE]]
-	~~[[Category: Alpha-beta-beta-alpha sandwich]]~~	+	[[Category: Merz T]]
-	~~[[Category: Beta-peptide cleaving enzyme]]~~	+
-	~~[[Category: Hydrolase-inhibitor complex]]~~	+
-	~~[[Category: Ntn-hydrolase~~]]	+

OCA at 07:00, 12 May 2022

2022-05-12T07:00:51Z

←Older revision		Revision as of 07:00, 12 May 2022
Line 1:		Line 1:

	==Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin==		==Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin==
-	<StructureSection load='3nfb' size='340' side='right' caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>	+	<StructureSection load='3nfb' size='340' side='right'caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ccug_52537 Ccug 52537]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3NFB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Ccug_52537 Ccug 52537]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 CCUG 52537])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 CCUG 52537])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [~~http~~://pdbe.org/3nfb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3nfb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfb ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [https://pdbe.org/3nfb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [https://www.ebi.ac.uk/pdbsum/3nfb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/BAPA_SPHXN BAPA_SPHXN]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>	+	[[https://www.uniprot.org/uniprot/BAPA_SPHXN BAPA_SPHXN]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>

	==See Also==		==See Also==
-	*[[Aminopeptidase\|Aminopeptidase]]	+	*[[Aminopeptidase 3D structures\|Aminopeptidase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 19:		Line 19:
	</StructureSection>		</StructureSection>
	[[Category: Ccug 52537]]		[[Category: Ccug 52537]]
		+	[[Category: Large Structures]]
	[[Category: Geueke, B]]		[[Category: Geueke, B]]
	[[Category: Gruetter, M G]]		[[Category: Gruetter, M G]]

OCA at 01:09, 5 August 2016

2016-08-05T01:09:24Z

←Older revision		Revision as of 01:09, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin==		==Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin==
	<StructureSection load='3nfb' size='340' side='right' caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>		<StructureSection load='3nfb' size='340' side='right' caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NFB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ccug_52537 Ccug 52537]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NFB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 ~~Sphingosinicella xenopeptidilytica~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 CCUG 52537])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [http://www.ebi.ac.uk/pdbsum/3nfb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [http://pdbe.org/3nfb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [http://www.ebi.ac.uk/pdbsum/3nfb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfb ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~Q52VH2_9SPHN Q52VH2_9SPHN~~]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>	+	[[http://www.uniprot.org/uniprot/BAPA_SPHXN BAPA_SPHXN]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>

	==See Also==		==See Also==
Line 17:		Line 18:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Sphingosinicella xenopeptidilytica~~]]	+	[[Category: Ccug 52537]]
	[[Category: Geueke, B]]		[[Category: Geueke, B]]
	[[Category: Gruetter, M G]]		[[Category: Gruetter, M G]]

OCA at 14:35, 25 December 2014

2014-12-25T14:35:50Z

←Older revision		Revision as of 14:35, 25 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [http://www.ebi.ac.uk/pdbsum/3nfb PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [http://www.ebi.ac.uk/pdbsum/3nfb PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q52VH2_9SPHN Q52VH2_9SPHN]] Beta-aminopeptidase that can cleave synthetic beta-peptides which consist of backbone-elongated beta-amino acid residues that are not processed by common proteolytic enzymes. Can cleave the beta-peptides beta-homoVal-beta-homoAla-beta-homoLeu and beta-homoAla-beta-homoLeu. Requires a beta-amino acid at the N-terminus of peptide substrates and cleaves the peptide bond between the N-terminal beta-amino acid and the amino acid at the second position of tripeptidic substrates of the general structure H-betahXaa-Ile-betahTyr-OH according to the following preferences with regard to the side chain of the N-terminal beta-amino acid: aliphatic and aromatic > OH-containing > hydrogen, basic and polar.<ref>PMID:16109932</ref> <ref>PMID:17064315</ref>

	==See Also==		==See Also==
	*[[Aminopeptidase\|Aminopeptidase]]		*[[Aminopeptidase\|Aminopeptidase]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:19, 9 December 2014

2014-12-09T12:19:07Z

←Older revision		Revision as of 12:19, 9 December 2014
Line 1:		Line 1:
-	~~[[Image:3nfb.png\|left\|200px]]~~	+	==Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin==
-		+	<StructureSection load='3nfb' size='340' side='right' caption='[[3nfb]], [[Resolution\|resolution]] 1.85Å' scene=''>
-	~~{{STRUCTURE_3nfb\| PDB=3nfb \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NFB FirstGlance]. <br>
-	===Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OAE:(2S,4S)-2-[(R)-{[(2R)-2-AMINO-2-PHENYLACETYL]AMINO}(CARBOXY)METHYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXYLIC+ACID'>OAE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3n2w\|3n2w]], [[3ndv\|3ndv]], [[3n33\|3n33]], [[1b65\|1b65]]</td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">bapA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=364098 Sphingosinicella xenopeptidilytica])</td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nfb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nfb RCSB], [http://www.ebi.ac.uk/pdbsum/3nfb PDBsum]</span></td></tr>
-	[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].	+	</table>

	==See Also==		==See Also==
	*[[Aminopeptidase\|Aminopeptidase]]		*[[Aminopeptidase\|Aminopeptidase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Sphingosinicella xenopeptidilytica]]		[[Category: Sphingosinicella xenopeptidilytica]]
-	[[Category: Geueke, B.]]	+	[[Category: Geueke, B]]
-	[[Category: Gruetter, M G.]]	+	[[Category: Gruetter, M G]]
-	[[Category: Heck, T.]]	+	[[Category: Heck, T]]
-	[[Category: Kohler, H P.E.]]	+	[[Category: Kohler, H P.E]]
-	[[Category: Merz, T.]]	+	[[Category: Merz, T]]
	[[Category: Alpha-beta-beta-alpha sandwich]]		[[Category: Alpha-beta-beta-alpha sandwich]]
	[[Category: Beta-peptide cleaving enzyme]]		[[Category: Beta-peptide cleaving enzyme]]
	[[Category: Hydrolase-inhibitor complex]]		[[Category: Hydrolase-inhibitor complex]]
	[[Category: Ntn-hydrolase]]		[[Category: Ntn-hydrolase]]

OCA at 17:53, 20 October 2012

2012-10-20T17:53:23Z

←Older revision		Revision as of 17:53, 20 October 2012
Line 7:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3nfb]] is a 4 chain structure ~~of [[Aminopeptidase]]~~ with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].	+	[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].

	==See Also==		==See Also==

OCA at 02:19, 27 July 2012

2012-07-27T02:19:25Z

←Older revision		Revision as of 02:19, 27 July 2012
Line 1:		Line 1:
-	[[Image:3nfb.~~jpg~~\|left\|200px]]	+	[[Image:3nfb.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3nfb", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3nfb\| PDB=3nfb \| SCENE= }}		{{STRUCTURE_3nfb\| PDB=3nfb \| SCENE= }}

Line 13:		Line 7:

	==About this Structure==		==About this Structure==
-	[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].	+	[[3nfb]] is a 4 chain structure of [[Aminopeptidase]] with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].
		+
		+	==See Also==
		+	*[[Aminopeptidase\|Aminopeptidase]]
	[[Category: Sphingosinicella xenopeptidilytica]]		[[Category: Sphingosinicella xenopeptidilytica]]
	[[Category: Geueke, B.]]		[[Category: Geueke, B.]]

OCA at 05:43, 28 September 2011

2011-09-28T05:43:35Z

←Older revision		Revision as of 05:43, 28 September 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3nfb.jpg\|left\|200px]]

-	The ~~entry 3nfb~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3nfb", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3nfb\| PDB=3nfb \| SCENE= }}

-	~~Authors: Merz, T., Heck, T., Geueke, B., Kohler, H.~~-~~P.E., Gruetter, M.G.~~	+	===Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin===

-	~~Description: Crystal~~ structure ~~of the N~~-~~terminal~~ beta-~~aminopeptidase BapA in~~ complex ~~with hydrolyzed ampicillin~~	+
		+	==About this Structure==
		+	[[3nfb]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sphingosinicella_xenopeptidilytica Sphingosinicella xenopeptidilytica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFB OCA].
		+	[[Category: Sphingosinicella xenopeptidilytica]]
		+	[[Category: Geueke, B.]]
		+	[[Category: Gruetter, M G.]]
		+	[[Category: Heck, T.]]
		+	[[Category: Kohler, H P.E.]]
		+	[[Category: Merz, T.]]
		+	[[Category: Alpha-beta-beta-alpha sandwich]]
		+	[[Category: Beta-peptide cleaving enzyme]]
		+	[[Category: Hydrolase-inhibitor complex]]
		+	[[Category: Ntn-hydrolase]]

OCA: Protected "3nfb" [edit=sysop:move=sysop]

2011-04-13T04:50:32Z

Protected "3nfb" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:50, 13 April 2011

OCA at 04:50, 13 April 2011

2011-04-13T04:50:31Z

←Older revision		Revision as of 04:50, 13 April 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3nfb is ON HOLD until ~~sometime in the future~~	+	The entry 3nfb is ON HOLD until Paper Publication

-	Authors: Merz, T., Heck, T., Geueke, B., Kohler, H-P.E., Gruetter, M.G.	+	Authors: Merz, T., Heck, T., Geueke, B., Kohler, H.-P.E., Gruetter, M.G.

	Description: Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin		Description: Crystal structure of the N-terminal beta-aminopeptidase BapA in complex with hydrolyzed ampicillin
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 14 16:07:08 2010''