3no2 - Revision history

OCA at 11:46, 1 February 2023

2023-02-01T11:46:34Z

←Older revision		Revision as of 11:46, 1 February 2023
Line 1:		Line 1:

	==Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution==		==Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution==
-	<StructureSection load='3no2' size='340' side='right' caption='[[3no2]], [[Resolution\|resolution]] 1.35Å' scene=''>	+	<StructureSection load='3no2' size='340' side='right'caption='[[3no2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3no2]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacteroides_caccae_atcc_43185~~ Bacteroides caccae ~~atcc~~ 43185]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3NO2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3no2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_caccae_ATCC_43185 Bacteroides caccae ATCC 43185]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NO2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=~~PEG~~:~~DI(HYDROXYETHYL)ETHER~~'>~~PEG~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3no2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3no2 OCA], [https://pdbe.org/3no2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3no2 RCSB], [https://www.ebi.ac.uk/pdbsum/3no2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3no2 ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACCAC_01654, ZP_01960044.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411901 Bacteroides caccae ATCC 43185])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3no2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3no2 OCA], [~~http~~://pdbe.org/3no2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3no2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3no2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3no2 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A5ZFJ0_9BACE A5ZFJ0_9BACE]
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
	[[Image:Consurf_key_small.gif\|200px\|right]]		[[Image:Consurf_key_small.gif\|200px\|right]]
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacteroides caccae ~~atcc~~ 43185]]	+	[[Category: Bacteroides caccae ATCC 43185]]
-	[[Category: ~~Genomics, Joint Center for Structural~~]]	+	[[Category: Large Structures]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
-	[[Category: Jcsg]]
-	[[Category: PSI, Protein structure initiative]]
-	[[Category: Six-bladed beta-propeller]]
-	[[Category: Unknown function]]

OCA at 10:28, 30 January 2019

2019-01-30T10:28:48Z

←Older revision		Revision as of 10:28, 30 January 2019
Line 13:		Line 13:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/3no2_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/3no2_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 14:26, 4 August 2016

2016-08-04T14:26:19Z

←Older revision		Revision as of 14:26, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution==		==Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution==
	<StructureSection load='3no2' size='340' side='right' caption='[[3no2]], [[Resolution\|resolution]] 1.35Å' scene=''>		<StructureSection load='3no2' size='340' side='right' caption='[[3no2]], [[Resolution\|resolution]] 1.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3no2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteroides_caccae~~ Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NO2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3no2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae_atcc_43185 Bacteroides caccae atcc 43185]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NO2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACCAC_01654, ZP_01960044.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~47678~~ Bacteroides caccae])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACCAC_01654, ZP_01960044.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411901 Bacteroides caccae ATCC 43185])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3no2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3no2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3no2 RCSB], [http://www.ebi.ac.uk/pdbsum/3no2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3no2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3no2 OCA], [http://pdbe.org/3no2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3no2 RCSB], [http://www.ebi.ac.uk/pdbsum/3no2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3no2 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
Line 16:		Line 17:
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3no2 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Bacteroides caccae]]	+	[[Category: Bacteroides caccae atcc 43185]]
	[[Category: Genomics, Joint Center for Structural]]		[[Category: Genomics, Joint Center for Structural]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 07:24, 19 December 2014

2014-12-19T07:24:26Z

←Older revision		Revision as of 07:24, 19 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3no2\| PDB=3no2 \| SCENE= }}~~	+	==Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution==
-	===Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution===	+	<StructureSection load='3no2' size='340' side='right' caption='[[3no2]], [[Resolution\|resolution]] 1.35Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3no2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NO2 FirstGlance]. <br>
-	[[3no2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">BACCAC_01654, ZP_01960044.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=47678 Bacteroides caccae])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3no2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3no2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3no2 RCSB], [http://www.ebi.ac.uk/pdbsum/3no2 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/no/3no2_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacteroides caccae]]		[[Category: Bacteroides caccae]]
-	[[Category: Genomics, Joint Center for Structural.]]	+	[[Category: Genomics, Joint Center for Structural]]
-	[[Category: ~~JCSG, Joint Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
	[[Category: Jcsg]]		[[Category: Jcsg]]
-	[[Category: ~~Joint center for structural genomic]]~~	+	[[Category: PSI, Protein structure initiative]]
-	~~[[Category:~~ Protein structure initiative]]	+
-	~~[[Category: Psi-2~~]]	+
	[[Category: Six-bladed beta-propeller]]		[[Category: Six-bladed beta-propeller]]
-	[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]

OCA: Protected "3no2" [edit=sysop:move=sysop]

2013-04-24T12:07:35Z

Protected "3no2" [edit=sysop:move=sysop]

←Older revision

Revision as of 12:07, 24 April 2013

OCA at 12:07, 24 April 2013

2013-04-24T12:07:32Z

←Older revision		Revision as of 12:07, 24 April 2013
Line 1:		Line 1:
-	{{Seed}}
-	[[Image:3no2.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3no2", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3no2\| PDB=3no2 \| SCENE= }}		{{STRUCTURE_3no2\| PDB=3no2 \| SCENE= }}
-
	===Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution===		===Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution===
-

	==About this Structure==		==About this Structure==
-	~~3NO2~~ is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA].	+	[[3no2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA].
	[[Category: Bacteroides caccae]]		[[Category: Bacteroides caccae]]
	[[Category: Genomics, Joint Center for Structural.]]		[[Category: Genomics, Joint Center for Structural.]]
Line 25:		Line 14:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Unknown function]]		[[Category: Unknown function]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:43:12 2010''

OCA at 08:36, 28 July 2010

2010-07-28T08:36:29Z

←Older revision		Revision as of 08:36, 28 July 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3no2.jpg\|left\|200px]]

-	The ~~entry 3no2~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3no2", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3no2\| PDB=3no2 \| SCENE= }}

-	~~Authors: Joint Center for Structural Genomics~~ (~~JCSG~~)	+	===Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution===

-	Description: Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution (CASP Target)

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul ~~7 08~~:30:29 2010''	+	==About this Structure==
		+	3NO2 is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteroides_caccae Bacteroides caccae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NO2 OCA].
		+	[[Category: Bacteroides caccae]]
		+	[[Category: Genomics, Joint Center for Structural.]]
		+	[[Category: JCSG, Joint Center for Structural Genomics.]]
		+	[[Category: Jcsg]]
		+	[[Category: Joint center for structural genomic]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-2]]
		+	[[Category: Six-bladed beta-propeller]]
		+	[[Category: Structural genomic]]
		+	[[Category: Unknown function]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 28 12:43:12 2010''

OCA: New page: '''Unreleased structure''' The entry 3no2 is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a protein of unknown function (BACCAC_01654)...

2010-07-07T04:24:37Z

New page: '''Unreleased structure''' The entry 3no2 is ON HOLD Authors: Joint Center for Structural Genomics (JCSG) Description: Crystal structure of a protein of unknown function (BACCAC_01654)...

New page

'''Unreleased structure'''

The entry 3no2 is ON HOLD

Authors: Joint Center for Structural Genomics (JCSG)

Description: Crystal structure of a protein of unknown function (BACCAC_01654) from Bacteroides caccae at 1.35 A resolution (CASP Target)

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 7 08:30:29 2010''