3nog - Revision history

OCA at 16:48, 1 November 2023

2023-11-01T16:48:52Z

←Older revision		Revision as of 16:48, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3nog' size='340' side='right'caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>		<StructureSection load='3nog' size='340' side='right'caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Ecoli Ecoli~~] and [https://en.wikipedia.org/wiki/~~Synthetic_construct_sequences~~ Synthetic construct ~~sequences~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NOG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NOG FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.34Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max~~-~~height: 3em;'>[[2j8s\|2j8s]]~~, [[~~3noc~~\|~~3noc~~]]~~</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~acrB, acrE, b0462, JW0451 ([https~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [https://pdbe.org/3nog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [https://www.ebi.ac.uk/pdbsum/3nog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nog ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [https://pdbe.org/3nog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [https://www.ebi.ac.uk/pdbsum/3nog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nog ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/ACRB_ECOLI ACRB_ECOLI]] AcrAB is a drug efflux protein with a broad substrate specificity.<ref>PMID:16915237</ref> <ref>PMID:16946072</ref> <ref>PMID:17194213</ref>	+	[https://www.uniprot.org/uniprot/ACRB_ECOLI ACRB_ECOLI] AcrAB is a drug efflux protein with a broad substrate specificity.<ref>PMID:16915237</ref> <ref>PMID:16946072</ref> <ref>PMID:17194213</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Synthetic construct ~~sequences~~]]	+	[[Category: Synthetic construct]]
-	[[Category: Briand, C]]	+	[[Category: Briand C]]
-	[[Category: Gruetter~~, M G~~]]	+	[[Category: Gruetter MG]]
-	[[Category: Monroe, N]]	+	[[Category: Monroe N]]
-	~~[[Category: Crystallization chaperone]]~~	+
-	~~[[Category: Designed ankyrin repeat protein]]~~	+
-	~~[[Category: Drug-efflux pump]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: Rnd]]~~	+
-	~~[[Category: Transport protein]]~~	+
-	~~[[Category: Transport protein-protein binding complex~~]]	+

OCA at 07:06, 12 May 2022

2022-05-12T07:06:44Z

←Older revision		Revision as of 07:06, 12 May 2022
Line 1:		Line 1:

	==Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface==		==Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface==
-	<StructureSection load='3nog' size='340' side='right' caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>	+	<StructureSection load='3nog' size='340' side='right'caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Ecoli Ecoli] and [~~http~~://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3NOG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Ecoli Ecoli] and [https://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NOG FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2j8s\|2j8s]], [[3noc\|3noc]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2j8s\|2j8s]], [[3noc\|3noc]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">acrB, acrE, b0462, JW0451 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">acrB, acrE, b0462, JW0451 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [~~http~~://pdbe.org/3nog PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3nog PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3nog ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [https://pdbe.org/3nog PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [https://www.ebi.ac.uk/pdbsum/3nog PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nog ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/ACRB_ECOLI ACRB_ECOLI]] AcrAB is a drug efflux protein with a broad substrate specificity.<ref>PMID:16915237</ref> <ref>PMID:16946072</ref> <ref>PMID:17194213</ref>	+	[[https://www.uniprot.org/uniprot/ACRB_ECOLI ACRB_ECOLI]] AcrAB is a drug efflux protein with a broad substrate specificity.<ref>PMID:16915237</ref> <ref>PMID:16946072</ref> <ref>PMID:17194213</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[Ankyrin\|Ankyrin]]	+	*[[Ankyrin 3D structures\|Ankyrin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Synthetic construct sequences]]		[[Category: Synthetic construct sequences]]
	[[Category: Briand, C]]		[[Category: Briand, C]]

OCA at 00:09, 5 August 2016

2016-08-05T00:09:39Z

←Older revision		Revision as of 00:09, 5 August 2016
Line 1:		Line 1:
		+
	==Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface==		==Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface==
	<StructureSection load='3nog' size='340' side='right' caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>		<StructureSection load='3nog' size='340' side='right' caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli Escherichia coli~~] and [http://en.wikipedia.org/wiki/~~Synthetic_construct~~ Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NOG FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli] and [http://en.wikipedia.org/wiki/Synthetic_construct_sequences Synthetic construct sequences]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NOG FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2j8s\|2j8s]], [[3noc\|3noc]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2j8s\|2j8s]], [[3noc\|3noc]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">acrB, acrE, b0462, JW0451 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~562 Escherichia coli~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">acrB, acrE, b0462, JW0451 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [http://www.ebi.ac.uk/pdbsum/3nog PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [http://pdbe.org/3nog PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [http://www.ebi.ac.uk/pdbsum/3nog PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nog ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3nog" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 25:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli~~]]	+	[[Category: Ecoli]]
-	[[Category: Synthetic construct]]	+	[[Category: Synthetic construct sequences]]
	[[Category: Briand, C]]		[[Category: Briand, C]]
	[[Category: Gruetter, M G]]		[[Category: Gruetter, M G]]

OCA at 14:16, 25 December 2014

2014-12-25T14:16:03Z

←Older revision		Revision as of 14:16, 25 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [http://www.ebi.ac.uk/pdbsum/3nog PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [http://www.ebi.ac.uk/pdbsum/3nog PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/ACRB_ECOLI ACRB_ECOLI]] AcrAB is a drug efflux protein with a broad substrate specificity.<ref>PMID:16915237</ref> <ref>PMID:16946072</ref> <ref>PMID:17194213</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 11:05, 9 December 2014

2014-12-09T11:05:12Z

←Older revision		Revision as of 11:05, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3nog.~~png~~\|~~left~~\|~~200px~~]]	+	==Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface==
		+	<StructureSection load='3nog' size='340' side='right' caption='[[3nog]], [[Resolution\|resolution]] 3.34Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NOG FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=FME:N-FORMYLMETHIONINE'>FME</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2j8s\|2j8s]], [[3noc\|3noc]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">acrB, acrE, b0462, JW0451 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nog FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nog OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nog RCSB], [http://www.ebi.ac.uk/pdbsum/3nog PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The formation of well-diffracting crystals is a major bottleneck in structural analysis of membrane proteins by X-ray crystallography. One approach to improve crystal quality is the use of DARPins as crystallization chaperones. Here, we present a detailed analysis of the interaction between DARPins and the integral membrane protein AcrB. We find that binders selected in vitro by ribosome display share a common epitope. The comparative analysis of three crystal structures of AcrB-DARPin complexes allowed us to study the plasticity of the interaction with this dominant binding site. Seemingly redundant AcrB-DARPin crystals show substantially different diffraction quality as a result of subtle differences in the binding geometry. This work exemplifies the importance to screen a number of crystallization chaperones to obtain optimal diffraction data. Crystallographic analysis is complemented by biophysical characterization of nine AcrB binders. We observe that small variations in the interface can lead to differing behavior of the DARPins with regards to affinity, stoichiometry of the complexes and specificity for their target.

-	~~{{STRUCTURE_3nog\| PDB=3nog \| SCENE= }}~~	+	Designed ankyrin repeat protein binders for the crystallization of AcrB: Plasticity of the dominant interface.,Monroe N, Sennhauser G, Seeger MA, Briand C, Grutter MG J Struct Biol. 2011 May;174(2):269-81. Epub 2011 Feb 4. PMID:21296164<ref>PMID:21296164</ref>

-	~~===Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity~~ of the ~~Interface===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_21296164}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3nog]] is a 5 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli] and [http://en~~.~~wikipedia.org~~/~~wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA].~~	+

	==See Also==		==See Also==
	*[[Ankyrin\|Ankyrin]]		*[[Ankyrin\|Ankyrin]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:021296164<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Synthetic construct]]		[[Category: Synthetic construct]]
-	[[Category: Briand, C.]]	+	[[Category: Briand, C]]
-	[[Category: Gruetter, M G.]]	+	[[Category: Gruetter, M G]]
-	[[Category: Monroe, N.]]	+	[[Category: Monroe, N]]
	[[Category: Crystallization chaperone]]		[[Category: Crystallization chaperone]]
	[[Category: Designed ankyrin repeat protein]]		[[Category: Designed ankyrin repeat protein]]

OCA at 17:42, 20 October 2012

2012-10-20T17:42:49Z

←Older revision		Revision as of 17:42, 20 October 2012
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-	[[Image:3nog.~~jpg~~\|left\|200px]]	+	[[Image:3nog.png\|left\|200px]]

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	{{STRUCTURE_3nog\| PDB=3nog \| SCENE= }}		{{STRUCTURE_3nog\| PDB=3nog \| SCENE= }}

	===Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface===		===Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface===

-
-	<!--
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	{{ABSTRACT_PUBMED_21296164}}		{{ABSTRACT_PUBMED_21296164}}

	==About this Structure==		==About this Structure==
	[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA].		[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA].
		+
		+	==See Also==
		+	*[[Ankyrin\|Ankyrin]]

	==Reference==		==Reference==
Line 28:		Line 20:
	[[Category: Gruetter, M G.]]		[[Category: Gruetter, M G.]]
	[[Category: Monroe, N.]]		[[Category: Monroe, N.]]
		+	[[Category: Crystallization chaperone]]
		+	[[Category: Designed ankyrin repeat protein]]
		+	[[Category: Drug-efflux pump]]
		+	[[Category: Membrane protein]]
		+	[[Category: Rnd]]
		+	[[Category: Transport protein]]
		+	[[Category: Transport protein-protein binding complex]]

OCA: Protected "3nog" [edit=sysop:move=sysop]

2011-05-18T05:46:07Z

Protected "3nog" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:46, 18 May 2011

OCA at 05:45, 18 May 2011

2011-05-18T05:45:59Z

←Older revision		Revision as of 05:45, 18 May 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3nog.jpg\|left\|200px]]

-	The ~~entry 3nog~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3nog", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3nog\| PDB=3nog \| SCENE= }}

-	~~Authors~~: ~~Monroe, N., Briand, C., Gruetter, M.G.~~	+	===Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface===

-	Description: Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface

-	~~''Page seeded by~~ [http://oca.weizmann.ac.il/oca OCA ] ~~on Wed Sep 15 10~~:34:~~19 2010''~~	+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21296164}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21296164 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21296164}}
		+
		+	==About this Structure==
		+	[[3nog]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] and [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NOG OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021296164</ref><references group="xtra"/>
		+	[[Category: Escherichia coli]]
		+	[[Category: Synthetic construct]]
		+	[[Category: Briand, C.]]
		+	[[Category: Gruetter, M G.]]
		+	[[Category: Monroe, N.]]

OCA at 07:25, 15 September 2010

2010-09-15T07:25:37Z

←Older revision		Revision as of 07:25, 15 September 2010
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3nog is ON HOLD	+	The entry 3nog is ON HOLD until Paper Publication

	Authors: Monroe, N., Briand, C., Gruetter, M.G.		Authors: Monroe, N., Briand, C., Gruetter, M.G.
Line 7:		Line 7:
	Description: Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface		Description: Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Aug 4 08~~:49:16 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 15 10:34:19 2010''

OCA at 04:42, 4 August 2010

2010-08-04T04:42:17Z

←Older revision		Revision as of 04:42, 4 August 2010
Line 3:		Line 3:
	The entry 3nog is ON HOLD		The entry 3nog is ON HOLD

-	Authors: Monroe, N., Briand, C., Gruetter, M. G.	+	Authors: Monroe, N., Briand, C., Gruetter, M.G.

	Description: Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface		Description: Designed ankyrin repeat protein (DARPin) Binders to AcrB: Plasticity of the Interface

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul~~ 7 08:30:38 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 4 08:49:16 2010''