3nx3 - Revision history

OCA at 09:51, 30 January 2019

2019-01-30T09:51:54Z

←Older revision		Revision as of 09:51, 30 January 2019
Line 14:		Line 14:
	Check<jmol>		Check<jmol>
	<jmolCheckbox>		<jmolCheckbox>
-	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/3nx3_consurf.spt"</scriptWhenChecked>	+	<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/3nx3_consurf.spt"</scriptWhenChecked>
	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>		<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>

OCA at 14:35, 5 August 2016

2016-08-05T14:35:08Z

←Older revision		Revision as of 14:35, 5 August 2016
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		+
	==Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni==		==Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni==
	<StructureSection load='3nx3' size='340' side='right' caption='[[3nx3]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3nx3' size='340' side='right' caption='[[3nx3]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3nx3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NX3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3nx3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Camje Camje]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NX3 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">argD, Cj0227 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~32022 Campylobacter jejuni subsp. jejuni~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">argD, Cj0227 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=192222 CAMJE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetylornithine_transaminase Acetylornithine transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.11 2.6.1.11] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetylornithine_transaminase Acetylornithine transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.11 2.6.1.11] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nx3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nx3 RCSB], [http://www.ebi.ac.uk/pdbsum/3nx3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nx3 OCA], [http://pdbe.org/3nx3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3nx3 RCSB], [http://www.ebi.ac.uk/pdbsum/3nx3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3nx3 ProSAT]</span></td></tr>
	</table>		</table>
	== Evolutionary Conservation ==		== Evolutionary Conservation ==
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	<text>to colour the structure by Evolutionary Conservation</text>		<text>to colour the structure by Evolutionary Conservation</text>
	</jmolCheckbox>		</jmolCheckbox>
-	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/~~chain_selection~~.php?pdb_ID=~~2ata~~ ConSurf].	+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nx3 ConSurf].
	<div style="clear:both"></div>		<div style="clear:both"></div>
		+
		+	==See Also==
		+	*[[Aminotransferase\|Aminotransferase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Acetylornithine transaminase]]		[[Category: Acetylornithine transaminase]]
-	[[Category: ~~Campylobacter jejuni subsp. jejuni~~]]	+	[[Category: Camje]]
	[[Category: Anderson, S M]]		[[Category: Anderson, S M]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]

OCA at 06:42, 19 December 2014

2014-12-19T06:42:26Z

←Older revision		Revision as of 06:42, 19 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3nx3\| PDB=3nx3 \| SCENE= }}~~	+	==Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni==
-	===Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni===	+	<StructureSection load='3nx3' size='340' side='right' caption='[[3nx3]], [[Resolution\|resolution]] 1.80Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[3nx3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NX3 FirstGlance]. <br>
-	[[3nx3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">argD, Cj0227 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=32022 Campylobacter jejuni subsp. jejuni])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Acetylornithine_transaminase Acetylornithine transaminase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.6.1.11 2.6.1.11] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nx3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nx3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nx3 RCSB], [http://www.ebi.ac.uk/pdbsum/3nx3 PDBsum]</span></td></tr>
		+	</table>
		+	== Evolutionary Conservation ==
		+	[[Image:Consurf_key_small.gif\|200px\|right]]
		+	Check<jmol>
		+	<jmolCheckbox>
		+	<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nx/3nx3_consurf.spt"</scriptWhenChecked>
		+	<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
		+	<text>to colour the structure by Evolutionary Conservation</text>
		+	</jmolCheckbox>
		+	</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary\|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
		+	<div style="clear:both"></div>
		+	__TOC__
		+	</StructureSection>
	[[Category: Acetylornithine transaminase]]		[[Category: Acetylornithine transaminase]]
	[[Category: Campylobacter jejuni subsp. jejuni]]		[[Category: Campylobacter jejuni subsp. jejuni]]
-	[[Category: Anderson, S M.]]	+	[[Category: Anderson, S M]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Onopriyenko, O.]]	+	[[Category: Onopriyenko, O]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Skarina, T.]]	+	[[Category: Skarina, T]]
-	[[Category: Wawrzak, Z.]]	+	[[Category: Wawrzak, Z]]
	[[Category: Acetylornithine aminotransferase]]		[[Category: Acetylornithine aminotransferase]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Csgid]]		[[Category: Csgid]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA: Protected "3nx3" [edit=sysop:move=sysop]

2013-04-24T11:54:59Z

Protected "3nx3" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:54, 24 April 2013

OCA at 11:54, 24 April 2013

2013-04-24T11:54:56Z

←Older revision		Revision as of 11:54, 24 April 2013
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-	{{Seed}}
-	[[Image:3nx3.png\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_3nx3", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3nx3\| PDB=3nx3 \| SCENE= }}		{{STRUCTURE_3nx3\| PDB=3nx3 \| SCENE= }}
-
	===Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni===		===Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni===
-

	==About this Structure==		==About this Structure==
-	~~3NX3~~ is a 2 ~~chains~~ structure with ~~sequences~~ from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA].	+	[[3nx3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA].
	[[Category: Acetylornithine transaminase]]		[[Category: Acetylornithine transaminase]]
	[[Category: Campylobacter jejuni subsp. jejuni]]		[[Category: Campylobacter jejuni subsp. jejuni]]
Line 29:		Line 18:
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 18 00:23:16 2010''

OCA at 21:12, 17 November 2010

2010-11-17T21:12:01Z

←Older revision		Revision as of 21:12, 17 November 2010
Line 1:		Line 1:
	{{Seed}}		{{Seed}}
-	[[Image:3nx3.~~jpg~~\|left\|200px]]	+	[[Image:3nx3.png\|left\|200px]]

	<!--		<!--
Line 28:		Line 28:
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Transferase]]

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on ~~Wed Aug 25 09~~:02:34 2010''	+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Nov 18 00:23:16 2010''

OCA at 04:54, 25 August 2010

2010-08-25T04:54:45Z

←Older revision		Revision as of 04:54, 25 August 2010
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{Seed}}
		+	[[Image:3nx3.jpg\|left\|200px]]

-	The ~~entry 3nx3~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3nx3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3nx3\| PDB=3nx3 \| SCENE= }}

-	~~Authors: Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Skarina, T., Anderson, W.F., Savchenko, A., Center for Structural Genomics~~ of ~~Infectious Diseases~~ (~~CSGID~~)	+	===Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni===

-	Description: Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni

-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed ~~Jul 21 10~~:06:40 2010''	+	==About this Structure==
		+	3NX3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni Campylobacter jejuni subsp. jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NX3 OCA].
		+	[[Category: Acetylornithine transaminase]]
		+	[[Category: Campylobacter jejuni subsp. jejuni]]
		+	[[Category: Anderson, S M.]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
		+	[[Category: Onopriyenko, O.]]
		+	[[Category: Savchenko, A.]]
		+	[[Category: Skarina, T.]]
		+	[[Category: Wawrzak, Z.]]
		+	[[Category: Acetylornithine aminotransferase]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Structural genomic]]
		+
		+	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 25 09:02:34 2010''

OCA: New page: '''Unreleased structure''' The entry 3nx3 is ON HOLD Authors: Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Skarina, T., Anderson, W.F., Savchenko, A., Center for Structural Genomics of...

2010-07-21T06:00:15Z

New page: '''Unreleased structure''' The entry 3nx3 is ON HOLD Authors: Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Skarina, T., Anderson, W.F., Savchenko, A., Center for Structural Genomics of...

New page

'''Unreleased structure'''

The entry 3nx3 is ON HOLD

Authors: Anderson, S.M., Wawrzak, Z., Onopriyenko, O., Skarina, T., Anderson, W.F., Savchenko, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal structure of acetylornithine aminotransferase (argD) from Campylobacter jejuni

''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 21 10:06:40 2010''