3ph3 - Revision history

OCA at 17:06, 1 November 2023

2023-11-01T17:06:10Z

←Older revision		Revision as of 17:06, 1 November 2023
Line 3:		Line 3:
	<StructureSection load='3ph3' size='340' side='right'caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>		<StructureSection load='3ph3' size='340' side='right'caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Acet2 Acet2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=RB5:D~~-~~RIBOSE'>RB5</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.07Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>Cthe_2597 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~203119 ACET2])</td~~><~~/tr>~~	+
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b></td><td class="sblockDat"><span class='plainlinks~~'>~~[https://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [https://pdbe.org/3ph3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ph3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ph3 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [https://pdbe.org/3ph3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ph3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ph3 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A3DIL8_ACET2 A3DIL8_ACET2]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 26:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Acet2~~]]	+	[[Category: Acetivibrio thermocellus ATCC 27405]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Ribose-5-phosphate isomerase]]~~	+	[[Category: Ahn YJ]]
-	[[Category: Ahn~~, Y J~~]]	+	[[Category: Jung J]]
-	[[Category: Jung, J]]	+	[[Category: Kang LW]]
-	[[Category: Kang~~, L W~~]]	+	[[Category: Kim JK]]
-	[[Category: Kim~~, J K~~]]	+	[[Category: Oh DK]]
-	[[Category: Oh~~, D K~~]]	+	[[Category: Yeom SJ]]
-	[[Category: Yeom~~, S J]]~~	+
-	~~[[Category: Alpha-beta-alpha sandwich fold]]~~	+
-	~~[[Category: Isomerase~~]]	+

OCA at 08:39, 25 May 2022

2022-05-25T08:39:09Z

←Older revision		Revision as of 08:39, 25 May 2022
Line 1:		Line 1:

	==Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose==		==Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose==
-	<StructureSection load='3ph3' size='340' side='right' caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>	+	<StructureSection load='3ph3' size='340' side='right'caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Cloth Cloth~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acet2 Acet2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cthe_2597 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=203119 ~~CLOTH~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cthe_2597 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=203119 ACET2])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [~~http~~://pdbe.org/3ph3 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ph3 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ph3 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [https://pdbe.org/3ph3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [https://www.ebi.ac.uk/pdbsum/3ph3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ph3 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]	+	*[[Ribose-5-phosphate isomerase 3D structures\|Ribose-5-phosphate isomerase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Cloth~~]]	+	[[Category: Acet2]]
		+	[[Category: Large Structures]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
	[[Category: Ahn, Y J]]		[[Category: Ahn, Y J]]

OCA at 11:31, 10 December 2016

2016-12-10T11:31:22Z

←Older revision		Revision as of 11:31, 10 December 2016
Line 1:		Line 1:
		+
	==Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose==		==Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose==
	<StructureSection load='3ph3' size='340' side='right' caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>		<StructureSection load='3ph3' size='340' side='right' caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Clostridium_thermocellum Clostridium thermocellum~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cloth Cloth]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cthe_2597 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1515 Clostridium thermocellum~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cthe_2597 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=203119 CLOTH])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ph3 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [http://pdbe.org/3ph3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ph3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ph3 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3ph3" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 24:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Clostridium thermocellum~~]]	+	[[Category: Cloth]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
	[[Category: Ahn, Y J]]		[[Category: Ahn, Y J]]

OCA at 12:16, 9 December 2014

2014-12-09T12:16:25Z

←Older revision		Revision as of 12:16, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3ph3.~~png~~\|~~left~~\|~~200px~~]]	+	==Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose==
		+	<StructureSection load='3ph3' size='340' side='right' caption='[[3ph3]], [[Resolution\|resolution]] 2.07Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PH3 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RB5:D-RIBOSE'>RB5</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3he8\|3he8]], [[3hee\|3hee]], [[3ph4\|3ph4]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cthe_2597 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1515 Clostridium thermocellum])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribose-5-phosphate_isomerase Ribose-5-phosphate isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.1.6 5.3.1.6] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ph3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ph3 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ph3 RCSB], [http://www.ebi.ac.uk/pdbsum/3ph3 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Ribose-5-phosphate isomerase (Rpi) catalyzes the conversion of D: -ribose 5-phosphate (R5P) to D: -ribulose 5-phosphate, which is an important step in the non-oxidative pathway of the pentose phosphate pathway and the Calvin cycle of photosynthesis. Recently, Rpis have been used to produce valuable rare sugars for industrial purposes. Of the Rpis, D: -ribose-5-phosphate isomerase B from Clostridium thermocellum (CtRpi) has the fastest reactions kinetics. While Thermotoga maritime Rpi (TmRpi) has the same substrate specificity as CtRpi, the overall activity of CtRpi is approximately 200-fold higher than that of TmRpi. To understand the structural basis of these kinetic differences, we determined the crystal structures, at 2.1-A resolution or higher, of CtRpi alone and bound to its substrates, R5P, D: -ribose, and D: -allose. Structural comparisons of CtRpi and TmRpi showed overall conservation of their structures with two notable differences. First, the volume of the CtRpi substrate binding pocket (SBP) was 20% less than that of the TmRpi SBP. Second, the residues next to the sugar-ring opening catalytic residue (His98) were different. We switched the key residues, involved in SBP shaping or catalysis, between CtRpi and TmRpi by site-directed mutagenesis, and studied the enzyme kinetics of the mutants. We found that tight interactions between the two monomers, narrow SBP width, and the residues near the catalytic residue are all critical for the fast enzyme kinetics of CtRpi.

-	~~{{STRUCTURE_3ph3\| PDB=3ph3 \| SCENE= }}~~	+	Crystal structure of Clostridium thermocellum ribose-5-phosphate isomerase B reveals properties critical for fast enzyme kinetics.,Jung J, Kim JK, Yeom SJ, Ahn YJ, Oh DK, Kang LW Appl Microbiol Biotechnol. 2011 Apr;90(2):517-27. Epub 2011 Jan 21. PMID:21253719<ref>PMID:21253719</ref>

-	~~===Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_21253719}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3ph3]] is~~ a ~~2 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Clostridium_thermocellum Clostridium thermocellum]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].~~	+

	==See Also==		==See Also==
	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]		*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:021253719<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Clostridium thermocellum]]		[[Category: Clostridium thermocellum]]
	[[Category: Ribose-5-phosphate isomerase]]		[[Category: Ribose-5-phosphate isomerase]]
-	[[Category: Ahn, Y J.]]	+	[[Category: Ahn, Y J]]
-	[[Category: Jung, J.]]	+	[[Category: Jung, J]]
-	[[Category: Kang, L W.]]	+	[[Category: Kang, L W]]
-	[[Category: Kim, J K.]]	+	[[Category: Kim, J K]]
-	[[Category: Oh, D K.]]	+	[[Category: Oh, D K]]
-	[[Category: Yeom, S J.]]	+	[[Category: Yeom, S J]]
	[[Category: Alpha-beta-alpha sandwich fold]]		[[Category: Alpha-beta-alpha sandwich fold]]
	[[Category: Isomerase]]		[[Category: Isomerase]]

OCA at 09:51, 20 October 2012

2012-10-20T09:51:23Z

←Older revision		Revision as of 09:51, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3ph3]] is a 2 chain structure ~~of [[Ribose-5-phosphate isomerase]]~~ with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].	+	[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].

	==See Also==		==See Also==

OCA at 00:10, 26 July 2012

2012-07-26T00:10:25Z

←Older revision		Revision as of 00:10, 26 July 2012
Line 1:		Line 1:
-	[[Image:3ph3.~~jpg~~\|left\|200px]]	+	[[Image:3ph3.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3ph3", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3ph3\| PDB=3ph3 \| SCENE= }}		{{STRUCTURE_3ph3\| PDB=3ph3 \| SCENE= }}

	===Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose===		===Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_21253719}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 21253719 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_21253719}}		{{ABSTRACT_PUBMED_21253719}}

	==About this Structure==		==About this Structure==
-	[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].	+	[[3ph3]] is a 2 chain structure of [[Ribose-5-phosphate isomerase]] with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].
		+
		+	==See Also==
		+	*[[Ribose-5-phosphate isomerase\|Ribose-5-phosphate isomerase]]

	==Reference==		==Reference==

OCA at 16:42, 22 June 2011

2011-06-22T16:42:01Z

←Older revision		Revision as of 16:42, 22 June 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3ph3.jpg\|left\|200px]]

-	The ~~entry 3ph3~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3ph3", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3ph3\| PDB=3ph3 \| SCENE= }}

-	~~Authors: Jung, J., Kim, J.~~-~~K., Yeom, S.~~-~~J., Ahn, Y.~~-~~J., Oh, D.-K., Kang, L.-W.~~	+	===Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose===

-	~~Description~~: Clostridium thermocellum Ribose-5-~~Phosphate Isomerase B with d~~-~~ribose~~	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_21253719}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 21253719 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_21253719}}
		+
		+	==About this Structure==
		+	[[3ph3]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Clostridium_thermocellum Clostridium thermocellum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PH3 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:021253719</ref><references group="xtra"/>
		+	[[Category: Clostridium thermocellum]]
		+	[[Category: Ribose-5-phosphate isomerase]]
		+	[[Category: Ahn, Y J.]]
		+	[[Category: Jung, J.]]
		+	[[Category: Kang, L W.]]
		+	[[Category: Kim, J K.]]
		+	[[Category: Oh, D K.]]
		+	[[Category: Yeom, S J.]]
		+	[[Category: Alpha-beta-alpha sandwich fold]]
		+	[[Category: Isomerase]]

OCA at 10:14, 21 April 2011

2011-04-21T10:14:59Z

←Older revision		Revision as of 10:14, 21 April 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3ph3 is ON HOLD until ~~sometime in the future~~	+	The entry 3ph3 is ON HOLD until Paper Publication

	Authors: Jung, J., Kim, J.-K., Yeom, S.-J., Ahn, Y.-J., Oh, D.-K., Kang, L.-W.		Authors: Jung, J., Kim, J.-K., Yeom, S.-J., Ahn, Y.-J., Oh, D.-K., Kang, L.-W.

	Description: Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose		Description: Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose

OCA: Protected "3ph3" [edit=sysop:move=sysop]

2011-02-16T05:17:27Z

Protected "3ph3" [edit=sysop:move=sysop]

←Older revision

Revision as of 05:17, 16 February 2011

OCA at 05:17, 16 February 2011

2011-02-16T05:17:26Z

←Older revision		Revision as of 05:17, 16 February 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3ph3 is ON HOLD	+	The entry 3ph3 is ON HOLD until sometime in the future

	Authors: Jung, J., Kim, J.-K., Yeom, S.-J., Ahn, Y.-J., Oh, D.-K., Kang, L.-W.		Authors: Jung, J., Kim, J.-K., Yeom, S.-J., Ahn, Y.-J., Oh, D.-K., Kang, L.-W.

	Description: Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose		Description: Clostridium thermocellum Ribose-5-Phosphate Isomerase B with d-ribose
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 24 13:57:48 2010''