3pr6 - Revision history

OCA at 13:33, 1 March 2024

2024-03-01T13:33:21Z

←Older revision		Revision as of 13:33, 1 March 2024
Line 3:		Line 3:
	<StructureSection load='3pr6' size='340' side='right'caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3pr6' size='340' side='right'caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Atcc_18824 Atcc 18824~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~, ~~<scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.8Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene><~~/td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~<tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [https://pdbe.org/3pr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [https://www.ebi.ac.uk/pdbsum/3pr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pr6 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [https://pdbe.org/3pr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [https://www.ebi.ac.uk/pdbsum/3pr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pr6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/TCA17_YEAST TCA17_YEAST]] Required, together with the TRAPP II subunit TRS33, for TRAPP II complex assembly or stability, and for proper Golgi localization of TRAPP and the Rab GTPase YPT31.<ref>PMID:19220810</ref> <ref>PMID:19416478</ref>	+	[https://www.uniprot.org/uniprot/TCA17_YEAST TCA17_YEAST] Required, together with the TRAPP II subunit TRS33, for TRAPP II complex assembly or stability, and for proper Golgi localization of TRAPP and the Rab GTPase YPT31.<ref>PMID:19220810</ref> <ref>PMID:19416478</ref>
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	The transport protein particle (TRAPP) is a hetero-multimeric complex involved in the trafficking of COP II (coat protein complex-II) vesicles. TRAPP is present in different eukaryotes from yeast to vertebrates and occurs in three distinct modifications with function in different intracellular transport steps. All forms contain a core of five essential subunits, and the different species of TRAPP are formed by the addition of various subunits. A recently identified TRAPP-associated protein, Tca17, is supposed to be involved in the regulation of the transport complex. We have determined the three-dimensional structure of yeast Tca17 by X-ray crystallography at a resolution of 1.8 A. It adopts the longin fold characteristic for the Bet5 family of TRAPP subunits, and it also shares a binding motif of these for the interaction with other members of the complex. Two alternative models of the localization of Tca17 within TRAPP as well as its potential role in the regulation of TRAPP function by transient integration into the complex are discussed. This article is protected by copyright. All rights reserved.	+
-		+
-	~~Crystal structure of the yeast TRAPP-associated protein Tca17.,Wang C, Gohlke U, Roske Y, Heinemann U FEBS J. 2014 Jun 24. doi: 10.1111/febs.12888. PMID:24961828<ref>PMID:24961828</ref>~~	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 3pr6" style="background-color:#fffaf0;"></div~~>	+
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 18824]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Gohlke, U~~]]	+	[[Category: Saccharomyces cerevisiae]]
-	[[Category: ~~Heinemann,~~ U]]	+	[[Category: Gohlke U]]
-	[[Category: ~~Wang, C~~]]	+	[[Category: Heinemann U]]
-	[[Category: ~~Longin fold]]~~	+	[[Category: Wang C]]
-	~~[[Category: Trans-golgi network]]~~	+
-	~~[[Category: Transport protein]]~~	+
-	~~[[Category: Trapp complex]]~~	+
-	~~[[Category: Vesicle tethering regulation~~]]	+

OCA at 08:51, 25 May 2022

2022-05-25T08:51:29Z

←Older revision		Revision as of 08:51, 25 May 2022
Line 1:		Line 1:

	==Crystal structure analysis of yeast TRAPP associate protein Tca17==		==Crystal structure analysis of yeast TRAPP associate protein Tca17==
-	<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>	+	<StructureSection load='3pr6' size='340' side='right'caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [~~http~~://pdbe.org/3pr6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3pr6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3pr6 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [https://pdbe.org/3pr6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [https://www.ebi.ac.uk/pdbsum/3pr6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pr6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/TCA17_YEAST TCA17_YEAST]] Required, together with the TRAPP II subunit TRS33, for TRAPP II complex assembly or stability, and for proper Golgi localization of TRAPP and the Rab GTPase YPT31.<ref>PMID:19220810</ref> <ref>PMID:19416478</ref>	+	[[https://www.uniprot.org/uniprot/TCA17_YEAST TCA17_YEAST]] Required, together with the TRAPP II subunit TRS33, for TRAPP II complex assembly or stability, and for proper Golgi localization of TRAPP and the Rab GTPase YPT31.<ref>PMID:19220810</ref> <ref>PMID:19416478</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 18824]]		[[Category: Atcc 18824]]
		+	[[Category: Large Structures]]
	[[Category: Gohlke, U]]		[[Category: Gohlke, U]]
	[[Category: Heinemann, U]]		[[Category: Heinemann, U]]

OCA at 02:58, 5 August 2016

2016-08-05T02:58:19Z

←Older revision		Revision as of 02:58, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure analysis of yeast TRAPP associate protein Tca17==		==Crystal structure analysis of yeast TRAPP associate protein Tca17==
	<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://pdbe.org/3pr6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3pr6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3pr6" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 15:19, 25 December 2014

2014-12-25T15:19:25Z

←Older revision		Revision as of 15:19, 25 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/TCA17_YEAST TCA17_YEAST]] Required, together with the TRAPP II subunit TRS33, for TRAPP II complex assembly or stability, and for proper Golgi localization of TRAPP and the Rab GTPase YPT31.<ref>PMID:19220810</ref> <ref>PMID:19416478</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 18824]]		[[Category: Atcc 18824]]
-	[[Category: Gohlke, U.]]	+	[[Category: Gohlke, U]]
-	[[Category: Heinemann, U.]]	+	[[Category: Heinemann, U]]
-	[[Category: Wang, C.]]	+	[[Category: Wang, C]]
	[[Category: Longin fold]]		[[Category: Longin fold]]
	[[Category: Trans-golgi network]]		[[Category: Trans-golgi network]]

OCA at 06:18, 9 July 2014

2014-07-09T06:18:58Z

←Older revision		Revision as of 06:18, 9 July 2014
Line 2:		Line 2:
	<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>		<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Saccharomyces_cerevisiae Saccharomyces cerevisiae~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>
	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>		</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ~~Saccharomyces cerevisiae~~])</td></tr>	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>		<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>
	<table>		<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The transport protein particle (TRAPP) is a hetero-multimeric complex involved in the trafficking of COP II (coat protein complex-II) vesicles. TRAPP is present in different eukaryotes from yeast to vertebrates and occurs in three distinct modifications with function in different intracellular transport steps. All forms contain a core of five essential subunits, and the different species of TRAPP are formed by the addition of various subunits. A recently identified TRAPP-associated protein, Tca17, is supposed to be involved in the regulation of the transport complex. We have determined the three-dimensional structure of yeast Tca17 by X-ray crystallography at a resolution of 1.8 A. It adopts the longin fold characteristic for the Bet5 family of TRAPP subunits, and it also shares a binding motif of these for the interaction with other members of the complex. Two alternative models of the localization of Tca17 within TRAPP as well as its potential role in the regulation of TRAPP function by transient integration into the complex are discussed. This article is protected by copyright. All rights reserved.
		+
		+	Crystal structure of the yeast TRAPP-associated protein Tca17.,Wang C, Gohlke U, Roske Y, Heinemann U FEBS J. 2014 Jun 24. doi: 10.1111/febs.12888. PMID:24961828<ref>PMID:24961828</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Saccharomyces cerevisiae~~]]	+	[[Category: Atcc 18824]]
	[[Category: Gohlke, U.]]		[[Category: Gohlke, U.]]
	[[Category: Heinemann, U.]]		[[Category: Heinemann, U.]]

OCA at 05:30, 4 June 2014

2014-06-04T05:30:48Z

←Older revision		Revision as of 05:30, 4 June 2014
Line 1:		Line 1:
-	~~[[Image:3pr6.png\|left\|200px]]~~	+	==Crystal structure analysis of yeast TRAPP associate protein Tca17==
-		+	<StructureSection load='3pr6' size='340' side='right' caption='[[3pr6]], [[Resolution\|resolution]] 1.80Å' scene=''>
-	~~<!--~~	+	== Structural highlights ==
-	~~The line below this paragraph, containing "STRUCTURE_3pr6", creates the "Structure Box" on the page.~~	+	<table><tr><td colspan='2'>[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PR6 FirstGlance]. <br>
-	~~You may change the PDB parameter (which sets the PDB file loaded into the applet)~~	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene><br>
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~or leave the SCENE parameter empty for the default display.~~	+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">SYGP-ORF36, TCA17, YEL048C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae])</td></tr>
-	~~-->~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pr6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pr6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pr6 RCSB], [http://www.ebi.ac.uk/pdbsum/3pr6 PDBsum]</span></td></tr>
-	~~{{STRUCTURE_3pr6\| PDB=3pr6 \| SCENE= }}~~	+	<table>
-		+	__TOC__
-	===Crystal structure analysis of yeast TRAPP associate protein Tca17===	+	</StructureSection>
-		+
-		+
-	==~~About this Structure~~==	+
-	[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA].	+
	[[Category: Saccharomyces cerevisiae]]		[[Category: Saccharomyces cerevisiae]]
	[[Category: Gohlke, U.]]		[[Category: Gohlke, U.]]

OCA at 08:08, 7 December 2011

2011-12-07T08:08:45Z

←Older revision		Revision as of 08:08, 7 December 2011
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-	[[Image:3pr6.~~jpg~~\|left\|200px]]	+	[[Image:3pr6.png\|left\|200px]]

	<!--		<!--

OCA at 06:25, 30 November 2011

2011-11-30T06:25:22Z

←Older revision		Revision as of 06:25, 30 November 2011
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3pr6.jpg\|left\|200px]]

-	The ~~entry 3pr6~~ is ~~ON HOLD~~ ~~until Nov 28 2012~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3pr6", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3pr6\| PDB=3pr6 \| SCENE= }}

-	~~Authors: Wang, C., Gohlke, U., Heinemann, U.~~	+	===Crystal structure analysis of yeast TRAPP associate protein Tca17===

-	~~Description: Crystal~~ structure ~~analysis of yeast TRAPP associate~~ protein ~~Tca17~~	+
		+	==About this Structure==
		+	[[3pr6]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PR6 OCA].
		+	[[Category: Saccharomyces cerevisiae]]
		+	[[Category: Gohlke, U.]]
		+	[[Category: Heinemann, U.]]
		+	[[Category: Wang, C.]]
		+	[[Category: Longin fold]]
		+	[[Category: Trans-golgi network]]
		+	[[Category: Transport protein]]
		+	[[Category: Trapp complex]]
		+	[[Category: Vesicle tethering regulation]]

OCA: Protected "3pr6" [edit=sysop:move=sysop]

2011-11-09T11:05:53Z

Protected "3pr6" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:05, 9 November 2011

OCA at 11:05, 9 November 2011

2011-11-09T11:05:52Z

←Older revision		Revision as of 11:05, 9 November 2011
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3pr6 is ON HOLD until ~~Paper Publication~~	+	The entry 3pr6 is ON HOLD until Nov 28 2012

	Authors: Wang, C., Gohlke, U., Heinemann, U.		Authors: Wang, C., Gohlke, U., Heinemann, U.

	Description: Crystal structure analysis of yeast TRAPP associate protein Tca17		Description: Crystal structure analysis of yeast TRAPP associate protein Tca17
-
-	''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec 15 08:24:55 2010''