3rjl - Revision history

OCA at 12:26, 14 March 2024

2024-03-14T12:26:36Z

←Older revision		Revision as of 12:26, 14 March 2024
Line 3:		Line 3:
	<StructureSection load='3rjl' size='340' side='right'caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='3rjl' size='340' side='right'caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Bacld Bacld~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_licheniformis_DSM_13_=_ATCC_14580 Bacillus licheniformis DSM 13 = ATCC 14580]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RJL FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>~~, ~~<scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>rocA, BLi00374, BL01710 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~279010 BACLD])</td~~><~~/tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>[https://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [https://pdbe.org/3rjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [https://www.ebi.ac.uk/pdbsum/3rjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rjl ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [https://pdbe.org/3rjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [https://www.ebi.ac.uk/pdbsum/3rjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rjl ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/ROCA_BACLD ROCA_BACLD]

	==See Also==		==See Also==
Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~1-pyrroline-5-carboxylate dehydrogenase]]~~	+	[[Category: Bacillus licheniformis DSM 13 = ATCC 14580]]
-	~~[[Category: Bacld~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Foti, R]]	+	[[Category: Foti R]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Patskovsky Y]]
-	[[Category: Patskovsky, Y]]	+	[[Category: Seidel RD]]
-	[[Category: Seidel~~, R D~~]]	+	[[Category: Toro R]]
-	[[Category: Toro, R]]	+
-	~~[[Category: Apoptosis]]~~	+
-	~~[[Category: Nad binding]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Proline oxidation]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Redox control~~]]	+

OCA at 10:13, 22 June 2022

2022-06-22T10:13:26Z

←Older revision		Revision as of 10:13, 22 June 2022
Line 1:		Line 1:

	==Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)==		==Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)==
-	<StructureSection load='3rjl' size='340' side='right' caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='3rjl' size='340' side='right'caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3RJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RJL FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rocA, BLi00374, BL01710 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rocA, BLi00374, BL01710 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [~~http~~://pdbe.org/3rjl PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3rjl PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3rjl ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [https://pdbe.org/3rjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [https://www.ebi.ac.uk/pdbsum/3rjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rjl ProSAT]</span></td></tr>
	</table>		</table>

Line 16:		Line 16:
	[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]		[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
	[[Category: Bacld]]		[[Category: Bacld]]
		+	[[Category: Large Structures]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Foti, R]]		[[Category: Foti, R]]

OCA at 11:32, 10 December 2016

2016-12-10T11:32:14Z

←Older revision		Revision as of 11:32, 10 December 2016
Line 1:		Line 1:
		+
	==Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)==		==Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)==
	<StructureSection load='3rjl' size='340' side='right' caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='3rjl' size='340' side='right' caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_licheniformis Bacillus licheniformis~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RJL FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacld Bacld]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RJL FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rocA, BLi00374, BL01710 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=~~1402 Bacillus licheniformis~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rocA, BLi00374, BL01710 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=279010 BACLD])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [http://www.ebi.ac.uk/pdbsum/3rjl PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [http://pdbe.org/3rjl PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [http://www.ebi.ac.uk/pdbsum/3rjl PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3rjl ProSAT]</span></td></tr>
	</table>		</table>

Line 14:		Line 15:
	</StructureSection>		</StructureSection>
	[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]		[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
-	[[Category: ~~Bacillus licheniformis~~]]	+	[[Category: Bacld]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Foti, R]]		[[Category: Foti, R]]

OCA at 13:06, 9 December 2014

2014-12-09T13:06:37Z

←Older revision		Revision as of 13:06, 9 December 2014
Line 1:		Line 1:
-	~~[[Image:3rjl.png\|left\|200px]]~~	+	==Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)==
-		+	<StructureSection load='3rjl' size='340' side='right' caption='[[3rjl]], [[Resolution\|resolution]] 2.20Å' scene=''>
-	~~{{STRUCTURE_3rjl\| PDB=3rjl \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3RJL FirstGlance]. <br>
-	===Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">rocA, BLi00374, BL01710 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1402 Bacillus licheniformis])</td></tr>
-		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/1-pyrroline-5-carboxylate_dehydrogenase 1-pyrroline-5-carboxylate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.12 1.5.1.12] </span></td></tr>
-	==~~About this Structure~~==	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3rjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rjl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3rjl RCSB], [http://www.ebi.ac.uk/pdbsum/3rjl PDBsum]</span></td></tr>
-	[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA].	+	</table>

	==See Also==		==See Also==
	*[[Pyrroline-5-carboxylate dehydrogenase\|Pyrroline-5-carboxylate dehydrogenase]]		*[[Pyrroline-5-carboxylate dehydrogenase\|Pyrroline-5-carboxylate dehydrogenase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]		[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
	[[Category: Bacillus licheniformis]]		[[Category: Bacillus licheniformis]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Foti, R.]]	+	[[Category: Foti, R]]
-	[[Category: ~~NYSGRC, New York~~ Structural ~~Genomics Research Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Patskovsky, Y.]]	+	[[Category: Patskovsky, Y]]
-	[[Category: Seidel, R D.]]	+	[[Category: Seidel, R D]]
-	[[Category: Toro, R.]]	+	[[Category: Toro, R]]
	[[Category: Apoptosis]]		[[Category: Apoptosis]]
	[[Category: Nad binding]]		[[Category: Nad binding]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
	[[Category: Proline oxidation]]		[[Category: Proline oxidation]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
	[[Category: Redox control]]		[[Category: Redox control]]

OCA at 19:05, 20 October 2012

2012-10-20T19:05:18Z

←Older revision		Revision as of 19:05, 20 October 2012
Line 1:		Line 1:
-	[[Image:3rjl.~~jpg~~\|left\|200px]]	+	[[Image:3rjl.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3rjl", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3rjl\| PDB=3rjl \| SCENE= }}		{{STRUCTURE_3rjl\| PDB=3rjl \| SCENE= }}

Line 14:		Line 8:
	==About this Structure==		==About this Structure==
	[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA].		[[3rjl]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_licheniformis Bacillus licheniformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RJL OCA].
		+
		+	==See Also==
		+	*[[Pyrroline-5-carboxylate dehydrogenase\|Pyrroline-5-carboxylate dehydrogenase]]
	[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]		[[Category: 1-pyrroline-5-carboxylate dehydrogenase]]
	[[Category: Bacillus licheniformis]]		[[Category: Bacillus licheniformis]]
Line 22:		Line 19:
	[[Category: Seidel, R D.]]		[[Category: Seidel, R D.]]
	[[Category: Toro, R.]]		[[Category: Toro, R.]]
		+	[[Category: Apoptosis]]
		+	[[Category: Nad binding]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Proline oxidation]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Redox control]]

OCA: Protected "3rjl" [edit=sysop:move=sysop]

2011-04-27T07:32:12Z

Protected "3rjl" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:32, 27 April 2011