3tor - Revision history

OCA at 13:35, 14 March 2024

2024-03-14T13:35:13Z

←Older revision		Revision as of 13:35, 14 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3tor]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TOR FirstGlance]. <br>		<table><tr><td colspan='2'>[[3tor]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TOR FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [https://pdbe.org/3tor PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [https://www.ebi.ac.uk/pdbsum/3tor PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tor ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [https://pdbe.org/3tor PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [https://www.ebi.ac.uk/pdbsum/3tor PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tor ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/NRFA_ECOLI NRFA_ECOLI]] Plays a role in nitrite reduction.[HAMAP-Rule:MF_01182]	+	[https://www.uniprot.org/uniprot/NRFA_ECOLI NRFA_ECOLI] Plays a role in nitrite reduction.[HAMAP-Rule:MF_01182]
-	~~<div style="background-color:#fffaf0;">~~	+
-	~~== Publication Abstract from PubMed ==~~	+
-	The decahaem homodimeric cytochrome c nitrite reductase (NrfA) is expressed within the periplasm of a wide range of Gamma-, Delta- and Epsilon-proteobacteria and is responsible for the six-electron reduction of nitrite to ammonia. This allows nitrite to be used as a terminal electron acceptor, facilitating anaerobic respiration while allowing nitrogen to remain in a biologically available form. NrfA has also been reported to reduce nitric oxide (a reaction intermediate) and sulfite to ammonia and sulfide respectively, suggesting a potential secondary role as a detoxification enzyme. The protein sequences and crystal structures of NrfA from different bacteria and the closely related octahaem nitrite reductase from Thioalkalivibrio nitratireducens (TvNir) reveal that these enzymes are homologous. The NrfA proteins contain five covalently attached haem groups, four of which are bis-histidine-co-ordinated, with the proximal histidine being provided by the highly conserved CXXCH motif. These haems are responsible for intraprotein electron transfer. The remaining haem is the site for nitrite reduction, which is ligated by a novel lysine residue provided by a CXXCK haem-binding motif. The TvNir nitrite reductase has five haems that are structurally similar to those of NrfA and three extra bis-histidine-coordinated haems that precede the NrfA conserved region. The present review compares the protein sequences and structures of NrfA and TvNir and discusses the subtle differences related to active-site architecture and Ca2+ binding that may have an impact on substrate reduction.	+
-		+
-	Characterization of the active site and calcium binding in cytochrome c nitrite reductases.,Lockwood CW, Clarke TA, Butt JN, Hemmings AM, Richardson DJ Biochem Soc Trans. 2011 Dec 1;39(6):1871-5. PMID:22103542<ref>PMID:22103542</ref>	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>~~	+
-	~~</div>~~	+
-	~~<div class="pdbe-citations 3tor" style="background-color:#fffaf0;"></div>~~	+

	==See Also==		==See Also==
	*[[Cytochrome c nitrite reductase\|Cytochrome c nitrite reductase]]		*[[Cytochrome c nitrite reductase\|Cytochrome c nitrite reductase]]
-	== References ==
-	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Butt~~, J N~~]]	+	[[Category: Butt JN]]
-	[[Category: Clarke~~, T A~~]]	+	[[Category: Clarke TA]]
-	[[Category: Hemmings~~, A M~~]]	+	[[Category: Hemmings AM]]
-	[[Category: Lockwood~~, C W.J~~]]	+	[[Category: Lockwood CWJ]]
-	[[Category: Richardson~~, D J]]~~	+	[[Category: Richardson DJ]]
-	~~[[Category: Calcium binding]]~~	+
-	~~[[Category: Decaheme]]~~	+
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Iron]]~~	+
-	~~[[Category: Metal-binding]]~~	+
-	~~[[Category: Multihaem cytochrome]]~~	+
-	~~[[Category: Nitrite]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Reductase~~]]	+

OCA at 17:06, 6 July 2022

2022-07-06T17:06:54Z

←Older revision		Revision as of 17:06, 6 July 2022
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	==Crystal structure of Escherichia coli NrfA with Europium bound==		==Crystal structure of Escherichia coli NrfA with Europium bound==
-	<StructureSection load='3tor' size='340' side='right' caption='[[3tor]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='3tor' size='340' side='right'caption='[[3tor]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3tor]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3TOR FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3tor]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TOR FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [~~http~~://pdbe.org/3tor PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3tor PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3tor ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [https://pdbe.org/3tor PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [https://www.ebi.ac.uk/pdbsum/3tor PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tor ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/NRFA_ECOLI NRFA_ECOLI]] Plays a role in nitrite reduction.[HAMAP-Rule:MF_01182]	+	[[https://www.uniprot.org/uniprot/NRFA_ECOLI NRFA_ECOLI]] Plays a role in nitrite reduction.[HAMAP-Rule:MF_01182]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[~~Nitrite~~ reductase\|~~Nitrite~~ reductase]]	+	*[[Cytochrome c nitrite reductase\|Cytochrome c nitrite reductase]]
	== References ==		== References ==
	<references/>		<references/>
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
		+	[[Category: Large Structures]]
	[[Category: Butt, J N]]		[[Category: Butt, J N]]
	[[Category: Clarke, T A]]		[[Category: Clarke, T A]]

OCA at 10:15, 13 February 2019

2019-02-13T10:15:33Z

←Older revision		Revision as of 10:15, 13 February 2019
Line 21:		Line 21:

	==See Also==		==See Also==
-	*[[~~Nitric~~ reductase\|~~Nitric~~ reductase]]	+	*[[Nitrite reductase\|Nitrite reductase]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 14:35, 5 August 2016

2016-08-05T14:35:52Z

←Older revision		Revision as of 14:35, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Escherichia coli NrfA with Europium bound==		==Crystal structure of Escherichia coli NrfA with Europium bound==
	<StructureSection load='3tor' size='340' side='right' caption='[[3tor]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='3tor' size='340' side='right' caption='[[3tor]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [http://www.ebi.ac.uk/pdbsum/3tor PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [http://pdbe.org/3tor PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [http://www.ebi.ac.uk/pdbsum/3tor PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3tor ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3tor" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==

OCA at 03:17, 25 December 2014

2014-12-25T03:17:38Z

←Older revision		Revision as of 03:17, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [http://www.ebi.ac.uk/pdbsum/3tor PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [http://www.ebi.ac.uk/pdbsum/3tor PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NRFA_ECOLI NRFA_ECOLI]] Plays a role in nitrite reduction.[HAMAP-Rule:MF_01182]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 16:42, 9 December 2014

2014-12-09T16:42:53Z

←Older revision		Revision as of 16:42, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~3tor.~~png~~\|~~left\|200px~~]]	+	==Crystal structure of Escherichia coli NrfA with Europium bound==
		+	<StructureSection load='3tor' size='340' side='right' caption='[[3tor]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3tor]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TOR FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EU:EUROPIUM+ION'>EU</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nitrite_reductase_(cytochrome;_ammonia-forming) Nitrite reductase (cytochrome; ammonia-forming)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.2.2 1.7.2.2] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tor FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tor OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3tor RCSB], [http://www.ebi.ac.uk/pdbsum/3tor PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The decahaem homodimeric cytochrome c nitrite reductase (NrfA) is expressed within the periplasm of a wide range of Gamma-, Delta- and Epsilon-proteobacteria and is responsible for the six-electron reduction of nitrite to ammonia. This allows nitrite to be used as a terminal electron acceptor, facilitating anaerobic respiration while allowing nitrogen to remain in a biologically available form. NrfA has also been reported to reduce nitric oxide (a reaction intermediate) and sulfite to ammonia and sulfide respectively, suggesting a potential secondary role as a detoxification enzyme. The protein sequences and crystal structures of NrfA from different bacteria and the closely related octahaem nitrite reductase from Thioalkalivibrio nitratireducens (TvNir) reveal that these enzymes are homologous. The NrfA proteins contain five covalently attached haem groups, four of which are bis-histidine-co-ordinated, with the proximal histidine being provided by the highly conserved CXXCH motif. These haems are responsible for intraprotein electron transfer. The remaining haem is the site for nitrite reduction, which is ligated by a novel lysine residue provided by a CXXCK haem-binding motif. The TvNir nitrite reductase has five haems that are structurally similar to those of NrfA and three extra bis-histidine-coordinated haems that precede the NrfA conserved region. The present review compares the protein sequences and structures of NrfA and TvNir and discusses the subtle differences related to active-site architecture and Ca2+ binding that may have an impact on substrate reduction.

-	~~{{STRUCTURE_3tor\| PDB=3tor \| SCENE= }}~~	+	Characterization of the active site and calcium binding in cytochrome c nitrite reductases.,Lockwood CW, Clarke TA, Butt JN, Hemmings AM, Richardson DJ Biochem Soc Trans. 2011 Dec 1;39(6):1871-5. PMID:22103542<ref>PMID:22103542</ref>

-	~~===Crystal structure~~ of ~~Escherichia coli NrfA with Europium bound===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_22103542}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3tor]] is a 4 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Escherichia_coli Escherichia coli]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].~~	+

	==See Also==		==See Also==
	*[[Nitric reductase\|Nitric reductase]]		*[[Nitric reductase\|Nitric reductase]]
-		+	== References ==
-	==~~Reference~~==	+	<references/>
-	<~~ref group="xtra">PMID:022103542<~~/~~ref~~><~~references group="xtra"~~/>	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli]]		[[Category: Escherichia coli]]
-	[[Category: Butt, J N.]]	+	[[Category: Butt, J N]]
-	[[Category: Clarke, T A.]]	+	[[Category: Clarke, T A]]
-	[[Category: Hemmings, A M.]]	+	[[Category: Hemmings, A M]]
-	[[Category: Lockwood, C W.J.]]	+	[[Category: Lockwood, C W.J]]
-	[[Category: Richardson, D J.]]	+	[[Category: Richardson, D J]]
	[[Category: Calcium binding]]		[[Category: Calcium binding]]
	[[Category: Decaheme]]		[[Category: Decaheme]]

OCA at 12:03, 20 October 2012

2012-10-20T12:03:08Z

←Older revision		Revision as of 12:03, 20 October 2012
Line 8:		Line 8:

	==About this Structure==		==About this Structure==
-	[[3tor]] is a 4 chain structure ~~of [[Nitric reductase]]~~ with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].	+	[[3tor]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].

	==See Also==		==See Also==

OCA at 07:27, 26 July 2012

2012-07-26T07:27:01Z

←Older revision		Revision as of 07:27, 26 July 2012
Line 1:		Line 1:
-	[[Image:3tor.~~jpg~~\|left\|200px]]	+	[[Image:3tor.png\|left\|200px]]

-	<!--
-	The line below this paragraph, containing "STRUCTURE_3tor", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_3tor\| PDB=3tor \| SCENE= }}		{{STRUCTURE_3tor\| PDB=3tor \| SCENE= }}

	===Crystal structure of Escherichia coli NrfA with Europium bound===		===Crystal structure of Escherichia coli NrfA with Europium bound===

-
-	<!--
-	The line below this paragraph, {{ABSTRACT_PUBMED_22103542}}, adds the Publication Abstract to the page
-	(as it appears on PubMed at http://www.pubmed.gov), where 22103542 is the PubMed ID number.
-	-->
	{{ABSTRACT_PUBMED_22103542}}		{{ABSTRACT_PUBMED_22103542}}

	==About this Structure==		==About this Structure==
-	[[3tor]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].	+	[[3tor]] is a 4 chain structure of [[Nitric reductase]] with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].
		+
		+	==See Also==
		+	*[[Nitric reductase\|Nitric reductase]]

	==Reference==		==Reference==

OCA at 08:07, 7 December 2011

2011-12-07T08:07:21Z

←Older revision		Revision as of 08:07, 7 December 2011
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-	~~'''Unreleased structure'''~~	+	[[Image:3tor.jpg\|left\|200px]]

-	The ~~entry 3tor~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3tor", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3tor\| PDB=3tor \| SCENE= }}

-	~~Authors: Lockwood, C.W.J., Clarke, T.A., Butt, J.N., Hemmings, A.M., Richardson, D.J.~~	+	===Crystal structure of Escherichia coli NrfA with Europium bound===

-	~~Description~~: ~~Crystal~~ structure of Escherichia coli ~~NrfA with Europium bound~~	+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22103542}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22103542 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22103542}}
		+
		+	==About this Structure==
		+	[[3tor]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TOR OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022103542</ref><references group="xtra"/>
		+	[[Category: Escherichia coli]]
		+	[[Category: Butt, J N.]]
		+	[[Category: Clarke, T A.]]
		+	[[Category: Hemmings, A M.]]
		+	[[Category: Lockwood, C W.J.]]
		+	[[Category: Richardson, D J.]]
		+	[[Category: Calcium binding]]
		+	[[Category: Decaheme]]
		+	[[Category: Electron transport]]
		+	[[Category: Iron]]
		+	[[Category: Metal-binding]]
		+	[[Category: Multihaem cytochrome]]
		+	[[Category: Nitrite]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Reductase]]

OCA at 05:16, 28 September 2011

2011-09-28T05:16:09Z

←Older revision		Revision as of 05:16, 28 September 2011
Line 3:		Line 3:
	The entry 3tor is ON HOLD		The entry 3tor is ON HOLD

-	Authors: Lockwood, ~~CWJ~~, Clarke, TA, Butt, JN, Hemmings, AM, Richardson, DJ	+	Authors: Lockwood, C.W.J., Clarke, T.A., Butt, J.N., Hemmings, A.M., Richardson, D.J.

	Description: Crystal structure of Escherichia coli NrfA with Europium bound		Description: Crystal structure of Escherichia coli NrfA with Europium bound