3vw1 - Revision history

OCA at 08:42, 20 March 2024

2024-03-20T08:42:40Z

←Older revision		Revision as of 08:42, 20 March 2024
Line 3:		Line 3:
	<StructureSection load='3vw1' size='340' side='right'caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>		<StructureSection load='3vw1' size='340' side='right'caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Salt1 Salt1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._14028S Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>~~, ~~<scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.21Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max-height: 3em;~~'>~~[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]~~</~~div~~><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<~~tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">STM0580, STM14_0676 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 SALT1])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [https://pdbe.org/3vw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw1 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [https://pdbe.org/3vw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw1 ProSAT]</span></td></tr>
	</table>		</table>
-	~~<div style~~=~~"background-color:#fffaf0;">~~	+	== Function ==
-	=~~= Publication Abstract from PubMed~~ ==	+	[https://www.uniprot.org/uniprot/A0A0F6AY66_SALT1 A0A0F6AY66_SALT1]
-	RamR is a transcriptional repressor of the gene-encoding RamA protein, which controls the expression of the multidrug efflux system genes acrAB-tolC. RamR is an important multidrug-resistance factor, however, its structure and the identity of the molecules to which it responds have been unknown. Here, we report the crystal structure of RamR in complex with multiple drugs, including berberine, crystal violet, dequalinium, ethidium bromide and rhodamine 6G. All compounds are found to interact with Phe155 of RamR, and each compound is surrounded by different amino acid residues. Binding of these compounds to RamR reduces its DNA-binding affinity, which results in the increased expression of ramA. Our results reveal significant flexibility in the substrate-recognition region of RamR, which regulates the bacterial efflux participating in multidrug resistance.	+
-		+
-	~~The crystal structure of multidrug-resistance regulator RamR with multiple drugs.,Yamasaki S, Nikaido E, Nakashima R, Sakurai K, Fujiwara D, Fujii I, Nishino K Nat Commun. 2013 Jun 26;4~~:~~2078. doi: 10.1038~~/~~ncomms3078. PMID:23800819<ref>PMID:23800819<~~/~~ref>~~	+
-		+
-	~~From MEDLINE®/PubMed®, a database of the U~~.S. ~~National Library of Medicine.<br>~~	+
-	</~~div>~~	+
-	~~<div class="pdbe-citations 3vw1" style="background-color:#fffaf0;"></div>~~	+
-	~~== References ==~~	+
-	~~<references~~/>	+
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Salt1~~]]	+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S]]
-	[[Category: Nakashima, R]]	+	[[Category: Nakashima R]]
-	[[Category: Nikaido, E]]	+	[[Category: Nikaido E]]
-	[[Category: Nishino, K]]	+	[[Category: Nishino K]]
-	[[Category: Sakurai, K]]	+	[[Category: Sakurai K]]
-	[[Category: Yamaguchi, A]]	+	[[Category: Yamaguchi A]]
-	[[Category: Yamasaki, S]]	+	[[Category: Yamasaki S]]
-	~~[[Category: Dna binding]]~~	+
-	~~[[Category: Hth-motif]]~~	+
-	~~[[Category: Tetr transcriptional regulator family]]~~	+
-	~~[[Category: Transcription regulator]]~~	+
-	~~[[Category: Transcriptional regulator~~]]	+

OCA at 19:07, 27 July 2022

2022-07-27T19:07:06Z

←Older revision		Revision as of 19:07, 27 July 2022
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	==Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium==		==Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium==
-	<StructureSection load='3vw1' size='340' side='right' caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>	+	<StructureSection load='3vw1' size='340' side='right'caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Salt1 Salt1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Salt1 Salt1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STM0580, STM14_0676 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 SALT1])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STM0580, STM14_0676 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 SALT1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [~~http~~://pdbe.org/3vw1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3vw1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [https://pdbe.org/3vw1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [https://www.ebi.ac.uk/pdbsum/3vw1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw1 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 22:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Salt1]]		[[Category: Salt1]]
	[[Category: Nakashima, R]]		[[Category: Nakashima, R]]

OCA at 15:17, 11 August 2016

2016-08-11T15:17:09Z

←Older revision		Revision as of 15:17, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium==		==Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium==
	<StructureSection load='3vw1' size='340' side='right' caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>		<StructureSection load='3vw1' size='340' side='right' caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salt1 Salt1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STM0580, STM14_0676 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 ~~Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STM0580, STM14_0676 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 SALT1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [http://www.ebi.ac.uk/pdbsum/3vw1 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [http://pdbe.org/3vw1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [http://www.ebi.ac.uk/pdbsum/3vw1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3vw1 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3vw1" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Salmonella enterica subsp. enterica serovar typhimurium str. 14028s~~]]	+	[[Category: Salt1]]
	[[Category: Nakashima, R]]		[[Category: Nakashima, R]]
	[[Category: Nikaido, E]]		[[Category: Nikaido, E]]

OCA at 10:31, 4 January 2015

2015-01-04T10:31:35Z

←Older revision		Revision as of 10:31, 4 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_3vw1\| PDB=3vw1 \| SCENE= }}~~	+	==Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium==
-	===Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium===	+	<StructureSection load='3vw1' size='340' side='right' caption='[[3vw1]], [[Resolution\|resolution]] 2.21Å' scene=''>
-	~~{{ABSTRACT_PUBMED_23800819}}~~	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VW1 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CVI:CRYSTAL+VIOLET'>CVI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3vvx\|3vvx]], [[3vvy\|3vvy]], [[3vvz\|3vvz]], [[3vw0\|3vw0]], [[3vw2\|3vw2]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">STM0580, STM14_0676 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=588858 Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vw1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vw1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vw1 RCSB], [http://www.ebi.ac.uk/pdbsum/3vw1 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	RamR is a transcriptional repressor of the gene-encoding RamA protein, which controls the expression of the multidrug efflux system genes acrAB-tolC. RamR is an important multidrug-resistance factor, however, its structure and the identity of the molecules to which it responds have been unknown. Here, we report the crystal structure of RamR in complex with multiple drugs, including berberine, crystal violet, dequalinium, ethidium bromide and rhodamine 6G. All compounds are found to interact with Phe155 of RamR, and each compound is surrounded by different amino acid residues. Binding of these compounds to RamR reduces its DNA-binding affinity, which results in the increased expression of ramA. Our results reveal significant flexibility in the substrate-recognition region of RamR, which regulates the bacterial efflux participating in multidrug resistance.

-	~~==About this Structure==~~	+	The crystal structure of multidrug-resistance regulator RamR with multiple drugs.,Yamasaki S, Nikaido E, Nakashima R, Sakurai K, Fujiwara D, Fujii I, Nishino K Nat Commun. 2013 Jun 26;4:2078. doi: 10.1038/ncomms3078. PMID:23800819<ref>PMID:23800819</ref>
-	~~[[3vw1]] is a 4 chain~~ structure with ~~sequence from [http~~:~~//en~~.~~wikipedia~~.~~org~~/~~wiki/Salmonella_enterica_subsp~~.~~_enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]. Full crystallographic information is available from [http~~:/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA].~~	+

-	==~~Reference~~==	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~<ref group="xtra">PMID:023800819</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	</div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]]		[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]]
-	[[Category: Nakashima, R.]]	+	[[Category: Nakashima, R]]
-	[[Category: Nikaido, E.]]	+	[[Category: Nikaido, E]]
-	[[Category: Nishino, K.]]	+	[[Category: Nishino, K]]
-	[[Category: Sakurai, K.]]	+	[[Category: Sakurai, K]]
-	[[Category: Yamaguchi, A.]]	+	[[Category: Yamaguchi, A]]
-	[[Category: Yamasaki, S.]]	+	[[Category: Yamasaki, S]]
	[[Category: Dna binding]]		[[Category: Dna binding]]
	[[Category: Hth-motif]]		[[Category: Hth-motif]]

OCA at 11:29, 24 July 2013

2013-07-24T11:29:15Z

←Older revision		Revision as of 11:29, 24 July 2013
Line 1:		Line 1:
	{{STRUCTURE_3vw1\| PDB=3vw1 \| SCENE= }}		{{STRUCTURE_3vw1\| PDB=3vw1 \| SCENE= }}
	===Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium===		===Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium===
		+	{{ABSTRACT_PUBMED_23800819}}

	==About this Structure==		==About this Structure==
	[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA].		[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:023800819</ref><references group="xtra"/><references/>
	[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]]		[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]]
-	[[Category: ~~Nakashma~~, R.]]	+	[[Category: Nakashima, R.]]
	[[Category: Nikaido, E.]]		[[Category: Nikaido, E.]]
	[[Category: Nishino, K.]]		[[Category: Nishino, K.]]

OCA at 14:12, 3 July 2013

2013-07-03T14:12:00Z

←Older revision		Revision as of 14:12, 3 July 2013
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_3vw1\| PDB=3vw1 \| SCENE= }}
		+	===Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium===

-	~~The entry~~ 3vw1 is ~~ON HOLD until Jul 30 2014~~	+	==About this Structure==
-		+	[[3vw1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._14028s Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VW1 OCA].
-	~~Authors~~: ~~Sakurai, K~~.~~, Yamasaki, S~~., Nakashma, R., Nikaido, E., Yamaguchi, A., ~~Nishino, K~~.	+	[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. 14028s]]
-		+	[[Category: Nakashma, R.]]
-	~~Description~~: ~~Crystal Strucuture of the Crystal Violet~~-~~Bound Form of RamR (~~Transcriptional ~~Regurator of TetR Family) from Salmonella Typhimurium~~	+	[[Category: Nikaido, E.]]
		+	[[Category: Nishino, K.]]
		+	[[Category: Sakurai, K.]]
		+	[[Category: Yamaguchi, A.]]
		+	[[Category: Yamasaki, S.]]
		+	[[Category: Dna binding]]
		+	[[Category: Hth-motif]]
		+	[[Category: Tetr transcriptional regulator family]]
		+	[[Category: Transcription regulator]]
		+	[[Category: Transcriptional regulator]]

OCA at 19:55, 26 September 2012

2012-09-26T19:55:56Z

←Older revision		Revision as of 19:55, 26 September 2012
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3vw1 is ON HOLD	+	The entry 3vw1 is ON HOLD until Jul 30 2014

	Authors: Sakurai, K., Yamasaki, S., Nakashma, R., Nikaido, E., Yamaguchi, A., Nishino, K.		Authors: Sakurai, K., Yamasaki, S., Nakashma, R., Nikaido, E., Yamaguchi, A., Nishino, K.

	Description: Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium		Description: Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium

OCA: Protected "3vw1" [edit=sysop:move=sysop]

2012-08-08T04:44:01Z

Protected "3vw1" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:44, 8 August 2012

OCA: New page: '''Unreleased structure''' The entry 3vw1 is ON HOLD Authors: Sakurai, K., Yamasaki, S., Nakashma, R., Nikaido, E., Yamaguchi, A., Nishino, K. Description: Crystal Strucuture of the Cr...

2012-08-08T04:44:00Z

New page: '''Unreleased structure''' The entry 3vw1 is ON HOLD Authors: Sakurai, K., Yamasaki, S., Nakashma, R., Nikaido, E., Yamaguchi, A., Nishino, K. Description: Crystal Strucuture of the Cr...

New page

'''Unreleased structure'''

The entry 3vw1 is ON HOLD

Authors: Sakurai, K., Yamasaki, S., Nakashma, R., Nikaido, E., Yamaguchi, A., Nishino, K.

Description: Crystal Strucuture of the Crystal Violet-Bound Form of RamR (Transcriptional Regurator of TetR Family) from Salmonella Typhimurium