3w1d - Revision history

OCA at 12:45, 8 November 2023

2023-11-08T12:45:33Z

←Older revision		Revision as of 12:45, 8 November 2023
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	<StructureSection load='3w1d' size='340' side='right'caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='3w1d' size='340' side='right'caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Aeqvi Aeqvi~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W1D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W1D FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4~~-[~~(4-HYDROXYPHENYL)METHYLIDENE~~]-5~~-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
-	<tr id='~~related~~'><td class="sblockLbl"><b>[[~~Related_structure~~\|~~Related~~:]]</b></td><td class="sblockDat"><~~div style~~='~~overflow~~: ~~auto; max~~-~~height: 3em;'>~~[~~[3w1c\|3w1c~~]~~]</div></td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
-	~~<tr id='gene~~'>~~<td class="sblockLbl"><b>[[Gene\|Gene:]]~~</b>~~</td><td class="sblockDat">GFP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [https://pdbe.org/3w1d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [https://www.ebi.ac.uk/pdbsum/3w1d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w1d ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [https://pdbe.org/3w1d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [https://www.ebi.ac.uk/pdbsum/3w1d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w1d ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.	+	[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 26:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aeqvi~~]]	+	[[Category: Aequorea victoria]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Imada, K]]	+	[[Category: Imada K]]
-	[[Category: Kinoshita, M]]	+	[[Category: Kinoshita M]]
-	[[Category: Watanabe~~, T M~~]]	+	[[Category: Watanabe TM]]
-	[[Category: Yoshizawa, K]]	+	[[Category: Yoshizawa K]]
-	~~[[Category: Beta barrel]]~~	+
-	~~[[Category: Fluorescent protein]]~~	+
-	~~[[Category: Luminescent protein~~]]	+

OCA at 05:17, 3 August 2022

2022-08-03T05:17:58Z

←Older revision		Revision as of 05:17, 3 August 2022
Line 1:		Line 1:

	==Structure of a pressure sensitive YFP variant YFP-G3==		==Structure of a pressure sensitive YFP variant YFP-G3==
-	<StructureSection load='3w1d' size='340' side='right' caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='3w1d' size='340' side='right'caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3W1D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3W1D FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w1c\|3w1c]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3w1c\|3w1c]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [~~http~~://pdbe.org/3w1d PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3w1d PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3w1d ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [https://pdbe.org/3w1d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [https://www.ebi.ac.uk/pdbsum/3w1d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3w1d ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.	+	[[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 22:		Line 22:

	==See Also==		==See Also==
-	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]	+	*[[Green Fluorescent Protein 3D structures\|Green Fluorescent Protein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 28:		Line 28:
	</StructureSection>		</StructureSection>
	[[Category: Aeqvi]]		[[Category: Aeqvi]]
		+	[[Category: Large Structures]]
	[[Category: Imada, K]]		[[Category: Imada, K]]
	[[Category: Kinoshita, M]]		[[Category: Kinoshita, M]]

OCA at 02:04, 5 August 2016

2016-08-05T02:04:36Z

←Older revision		Revision as of 02:04, 5 August 2016
Line 1:		Line 1:
		+
	==Structure of a pressure sensitive YFP variant YFP-G3==		==Structure of a pressure sensitive YFP variant YFP-G3==
	<StructureSection load='3w1d' size='340' side='right' caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='3w1d' size='340' side='right' caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Aequorea_victoria Aequorea victoria~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W1D FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aeqvi Aeqvi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W1D FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w1c\|3w1c]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w1c\|3w1c]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 ~~Aequorea victoria~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 AEQVI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [http://www.ebi.ac.uk/pdbsum/3w1d PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [http://pdbe.org/3w1d PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [http://www.ebi.ac.uk/pdbsum/3w1d PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3w1d ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 18:		Line 19:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3w1d" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
Line 25:		Line 27:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Aequorea victoria~~]]	+	[[Category: Aeqvi]]
	[[Category: Imada, K]]		[[Category: Imada, K]]
	[[Category: Kinoshita, M]]		[[Category: Kinoshita, M]]

OCA at 21:52, 24 December 2014

2014-12-24T21:52:24Z

←Older revision		Revision as of 21:52, 24 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [http://www.ebi.ac.uk/pdbsum/3w1d PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [http://www.ebi.ac.uk/pdbsum/3w1d PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:15, 21 December 2014

2014-12-21T07:15:51Z

←Older revision		Revision as of 07:15, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_3w1d\| PDB=3w1d \| SCENE= }}~~	+	==Structure of a pressure sensitive YFP variant YFP-G3==
-	===Structure of a pressure sensitive YFP variant YFP-G3===	+	<StructureSection load='3w1d' size='340' side='right' caption='[[3w1d]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	{~~{ABSTRACT_PUBMED_24014139}~~}	+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3w1d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W1D FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CR2:{(4Z)-2-(AMINOMETHYL)-4-[(4-HYDROXYPHENYL)METHYLIDENE]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>CR2</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w1c\|3w1c]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GFP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6100 Aequorea victoria])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w1d OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w1d RCSB], [http://www.ebi.ac.uk/pdbsum/3w1d PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Fluorescent protein-based indicators for intracellular environment conditions such as pH and ion concentrations are commonly used to study the status and dynamics of living cells. Despite being an important factor in many biological processes, the development of an indicator for the physicochemical state of water, such as pressure, viscosity and temperature, however, has been neglected. We here found a novel mutation that dramatically enhances the pressure dependency of the yellow fluorescent protein (YFP) by inserting several glycines into it. The crystal structure of the mutant showed that the tyrosine near the chromophore flipped toward the outside of the beta-can structure, resulting in the entry of a few water molecules near the chromophore. In response to changes in hydrostatic pressure, a spectrum shift and an intensity change of the fluorescence were observed. By measuring the fluorescence of the YFP mutant, we succeeded in measuring the intracellular pressure change in living cell. This study shows a new strategy of design to engineer fluorescent protein indicators to sense hydrostatic pressure.

-	~~==Function==~~	+	Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.,Watanabe TM, Imada K, Yoshizawa K, Nishiyama M, Kato C, Abe F, Morikawa TJ, Kinoshita M, Fujita H, Yanagida T PLoS One. 2013 Aug 27;8(8):e73212. doi: 10.1371/journal.pone.0073212. PMID:24014139<ref>PMID:24014139</ref>
-	~~[[http~~:~~//www~~.~~uniprot~~.~~org~~/~~uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor~~. ~~Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer~~. ~~Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin~~.	+

-	~~==About this Structure==~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[3w1d]] is~~ a ~~1 chain structure with sequence from [http://en~~.~~wikipedia~~.~~org/wiki/Aequorea_victoria Aequorea victoria]~~. ~~Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA].~~	+	</div>

-	==~~Reference~~==	+	==See Also==
-	~~<ref group~~=~~"xtra">PMID:024014139</ref>~~<references ~~group="xtra"~~/><~~references~~/>	+	*[[Green Fluorescent Protein\|Green Fluorescent Protein]]
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Aequorea victoria]]		[[Category: Aequorea victoria]]
-	[[Category: Imada, K.]]	+	[[Category: Imada, K]]
-	[[Category: Kinoshita, M.]]	+	[[Category: Kinoshita, M]]
-	[[Category: Watanabe, T M.]]	+	[[Category: Watanabe, T M]]
-	[[Category: Yoshizawa, K.]]	+	[[Category: Yoshizawa, K]]
	[[Category: Beta barrel]]		[[Category: Beta barrel]]
	[[Category: Fluorescent protein]]		[[Category: Fluorescent protein]]
	[[Category: Luminescent protein]]		[[Category: Luminescent protein]]

OCA at 07:26, 2 October 2013

2013-10-02T07:26:22Z

←Older revision		Revision as of 07:26, 2 October 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_3w1d\| PDB=3w1d \| SCENE= }}
		+	===Structure of a pressure sensitive YFP variant YFP-G3===
		+	{{ABSTRACT_PUBMED_24014139}}

-	~~The entry 3w1d~~ is ~~ON HOLD until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI]] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.

-	~~Authors~~: ~~Imada, K~~.~~, Yoshizawa, K~~.~~, Kinoshita, M~~.~~, Watanabe, T~~.M.	+	==About this Structure==
		+	[[3w1d]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W1D OCA].

-	~~Description~~: ~~Structure of a pressure sensitive YFP variant YFP-G3~~	+	==Reference==
		+	<ref group="xtra">PMID:024014139</ref><references group="xtra"/><references/>
		+	[[Category: Aequorea victoria]]
		+	[[Category: Imada, K.]]
		+	[[Category: Kinoshita, M.]]
		+	[[Category: Watanabe, T M.]]
		+	[[Category: Yoshizawa, K.]]
		+	[[Category: Beta barrel]]
		+	[[Category: Fluorescent protein]]
		+	[[Category: Luminescent protein]]

OCA at 10:17, 5 December 2012

2012-12-05T10:17:13Z

←Older revision		Revision as of 10:17, 5 December 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 3w1d is ON HOLD	+	The entry 3w1d is ON HOLD until Paper Publication

	Authors: Imada, K., Yoshizawa, K., Kinoshita, M., Watanabe, T.M.		Authors: Imada, K., Yoshizawa, K., Kinoshita, M., Watanabe, T.M.

	Description: Structure of a pressure sensitive YFP variant YFP-G3		Description: Structure of a pressure sensitive YFP variant YFP-G3

OCA: Protected "3w1d" [edit=sysop:move=sysop]

2012-11-21T08:52:44Z

Protected "3w1d" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:52, 21 November 2012

OCA: New page: '''Unreleased structure''' The entry 3w1d is ON HOLD Authors: Imada, K., Yoshizawa, K., Kinoshita, M., Watanabe, T.M. Description: Structure of a pressure sensitive YFP variant YFP-G3

2012-11-21T08:52:43Z

New page: '''Unreleased structure''' The entry 3w1d is ON HOLD Authors: Imada, K., Yoshizawa, K., Kinoshita, M., Watanabe, T.M. Description: Structure of a pressure sensitive YFP variant YFP-G3

New page

'''Unreleased structure'''

The entry 3w1d is ON HOLD

Authors: Imada, K., Yoshizawa, K., Kinoshita, M., Watanabe, T.M.

Description: Structure of a pressure sensitive YFP variant YFP-G3