3ws7 - Revision history

OCA at 13:25, 8 November 2023

2023-11-08T13:25:09Z

←Older revision		Revision as of 13:25, 8 November 2023
Line 3:		Line 3:
	<StructureSection load='3ws7' size='340' side='right'caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>		<StructureSection load='3ws7' size='340' side='right'caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Pyrcj Pyrcj~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrobaculum_calidifontis_JCM_11548 Pyrobaculum calidifontis JCM 11548]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE~~-~~ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>~~, ~~<scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.18Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>~~[[~~Related_structure~~\|~~Related:~~]]~~</b></td><td class="sblockDat"><div style='overflow: auto~~; ~~max-height: 3em;'>[[3w6u\|3w6u]], [[3w6z\|3w6z]]</div>~~</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~Pcal_0699 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode~~=~~Info&srchmode~~=~~5&id=410359 PYRCJ])</td~~></tr>	+
-	<~~tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[https://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276]~~ </~~span~~></td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [https://pdbe.org/3ws7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [https://pdbe.org/3ws7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A3MU08_PYRCJ A3MU08_PYRCJ]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 27:		Line 27:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Pyrcj]]~~	+	[[Category: Pyrobaculum calidifontis JCM 11548]]
-	~~[[Category: Serine 3-dehydrogenase~~]]	+	[[Category: Ohshima T]]
-	[[Category: Ohshima, T]]	+	[[Category: Sakuraba H]]
-	[[Category: Sakuraba, H]]	+	[[Category: Yoneda K]]
-	[[Category: Yoneda, K]]	+
-	~~[[Category: Hyperthermophilic archaeon]]~~	+
-	~~[[Category: L-serine 3-dehydrogenase]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Pyrobaculum calidifonti~~]]	+

OCA at 05:29, 10 August 2022

2022-08-10T05:29:45Z

←Older revision		Revision as of 05:29, 10 August 2022
Line 3:		Line 3:
	<StructureSection load='3ws7' size='340' side='right'caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>		<StructureSection load='3ws7' size='340' side='right'caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3w6u\|3w6u]], [[3w6z\|3w6z]]</div></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0699 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 PYRCJ])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0699 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 PYRCJ])</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [~~http~~://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [~~http~~://pdbe.org/3ws7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [https://pdbe.org/3ws7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 07:53, 21 May 2019

2019-05-21T07:53:16Z

←Older revision		Revision as of 07:53, 21 May 2019
Line 1:		Line 1:

	==The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis==		==The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis==
-	<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>	+	<StructureSection load='3ws7' size='340' side='right'caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>		<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>
Line 10:		Line 10:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://pdbe.org/3ws7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://pdbe.org/3ws7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	A gene encoding L-serine dehydrogenase (L-SerDH) that exhibits extremely low sequence identity to the Agrobacterium tumefaciens L-SerDH was identified in the hyperthermophilic archaeon Pyrobaculum calidifontis. The predicted amino acid sequence showed 36% identity with that of Pseudomonas aeruginosa L-SerDH, suggesting that P. calidifontis L-SerDH is a novel type of L-SerDH, like Ps. aeruginosa L-SerDH. The overexpressed enzyme appears to be the most thermostable L-SerDH described to date, and no loss of activity was observed by incubation for 30 min at temperatures up to 100 degrees C. The enzyme showed substantial reactivity towards D-serine, in addition to L-serine. Two different crystal structures of P. calidifontis L-SerDH were determined using the Se-MAD and MR method: the structure in complex with NADP(+)/sulfate ion at 1.18 A and the structure in complex with NADP(+)/L-tartrate (substrate analog) at 1.57 A. The fold of the catalytic domain showed similarity with that of Ps. aeruginosa L-SerDH. However, the active site structure significantly differed between the two enzymes. Based on the structure of the tartrate, L- and D-serine and 3-hydroxypropionate molecules were modeled into the active site and the substrate binding modes were estimated. A structural comparison suggests that the wide cavity at the substrate binding site is likely responsible for the high reactivity of the enzyme toward both L- and D-serine enantiomers. This is the first description of the structure of the novel type of L-SerDH with bound NADP(+) and substrate analog, and it provides new insight into the substrate binding mechanism of L-SerDH. The results obtained here may be very informative for the creation of L- or D-serine-specific SerDH by protein engineering.
		+
		+	Crystal structure of the NADP(+) and tartrate-bound complex of L-serine 3-dehydrogenase from the hyperthermophilic archaeon Pyrobaculum calidifontis.,Yoneda K, Sakuraba H, Araki T, Ohshima T Extremophiles. 2018 Jan 20. pii: 10.1007/s00792-018-1004-0. doi:, 10.1007/s00792-018-1004-0. PMID:29353380<ref>PMID:29353380</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	<div class="pdbe-citations 3ws7" style="background-color:#fffaf0;"></div>

	==See Also==		==See Also==
-	*[[6-phosphogluconate dehydrogenase\|6-phosphogluconate dehydrogenase]]	+	*[[6-phosphogluconate dehydrogenase 3D structures\|6-phosphogluconate dehydrogenase 3D structures]]
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Pyrcj]]		[[Category: Pyrcj]]
	[[Category: Serine 3-dehydrogenase]]		[[Category: Serine 3-dehydrogenase]]

OCA at 09:04, 21 February 2019

2019-02-21T09:04:01Z

←Older revision		Revision as of 09:04, 21 February 2019
Line 3:		Line 3:
	<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>		<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrcj Pyrcj]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Pcal_0699 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=410359 PYRCJ])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://pdbe.org/3ws7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://pdbe.org/3ws7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>
Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Pyrcj]]
	[[Category: Serine 3-dehydrogenase]]		[[Category: Serine 3-dehydrogenase]]
	[[Category: Ohshima, T]]		[[Category: Ohshima, T]]

OCA at 18:59, 10 December 2016

2016-12-10T18:59:24Z

←Older revision		Revision as of 18:59, 10 December 2016
Line 1:		Line 1:
		+
	==The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis==		==The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis==
	<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>		<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
Line 6:		Line 7:
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://pdbe.org/3ws7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ws7 ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[6-phosphogluconate dehydrogenase\|6-phosphogluconate dehydrogenase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 11:31, 4 March 2015

2015-03-04T11:31:04Z

←Older revision		Revision as of 11:31, 4 March 2015
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	==The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis==
-		+	<StructureSection load='3ws7' size='340' side='right' caption='[[3ws7]], [[Resolution\|resolution]] 1.18Å' scene=''>
-	~~The entry 3ws7 is ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[3ws7]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WS7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WS7 FirstGlance]. <br>
-	~~Authors: Yoneda, K., Sakuraba, H., Ohshima, T.~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3w6u\|3w6u]], [[3w6z\|3w6z]]</td></tr>
-	~~Description:~~ The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine_3-dehydrogenase Serine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.276 1.1.1.276] </span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ws7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ws7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ws7 RCSB], [http://www.ebi.ac.uk/pdbsum/3ws7 PDBsum]</span></td></tr>
-	[[~~Category~~: ~~Sakuraba~~, H]]	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Serine 3-dehydrogenase]]
	[[Category: Ohshima, T]]		[[Category: Ohshima, T]]
		+	[[Category: Sakuraba, H]]
	[[Category: Yoneda, K]]		[[Category: Yoneda, K]]
		+	[[Category: Hyperthermophilic archaeon]]
		+	[[Category: L-serine 3-dehydrogenase]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Pyrobaculum calidifonti]]

OCA at 12:51, 24 December 2014

2014-12-24T12:51:48Z

←Older revision		Revision as of 12:51, 24 December 2014
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	Description: The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis		Description: The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis
		+	[[Category: Unreleased Structures]]
		+	[[Category: Sakuraba, H]]
		+	[[Category: Ohshima, T]]
		+	[[Category: Yoneda, K]]

OCA: Protected "3ws7" [edit=sysop:move=sysop]

2014-03-12T11:40:30Z

Protected "3ws7" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:40, 12 March 2014

OCA: New page: '''Unreleased structure''' The entry 3ws7 is ON HOLD until Paper Publication Authors: Yoneda, K., Sakuraba, H., Ohshima, T. Description: The 1.18 A resolution structure of L-serine 3-d...

2014-03-12T11:40:29Z

New page: '''Unreleased structure''' The entry 3ws7 is ON HOLD until Paper Publication Authors: Yoneda, K., Sakuraba, H., Ohshima, T. Description: The 1.18 A resolution structure of L-serine 3-d...

New page

'''Unreleased structure'''

The entry 3ws7 is ON HOLD until Paper Publication

Authors: Yoneda, K., Sakuraba, H., Ohshima, T.

Description: The 1.18 A resolution structure of L-serine 3-dehydrogenase complexed with NADP+ and sulfate ion from the hyperthermophilic archaeon Pyrobaculum calidifontis