3zta - Revision history

OCA at 07:16, 18 August 2022

2022-08-18T07:16:25Z

←Older revision		Revision as of 07:16, 18 August 2022
Line 1:		Line 1:

	==The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling==		==The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling==
-	<StructureSection load='3zta' size='340' side='right' caption='[[3zta]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='3zta' size='340' side='right'caption='[[3zta]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_35608 Atcc 35608]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_35608 Atcc 35608]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [~~http~~://pdbe.org/3zta PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/3zta PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=3zta ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [https://pdbe.org/3zta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [https://www.ebi.ac.uk/pdbsum/3zta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zta ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	==See Also==		==See Also==
-	*[[Anti-sigma factor antagonist\|Anti-sigma factor antagonist]]	+	*[[Anti-sigma factor antagonist 3D structures\|Anti-sigma factor antagonist 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 25:		Line 25:
	</StructureSection>		</StructureSection>
	[[Category: Atcc 35608]]		[[Category: Atcc 35608]]
		+	[[Category: Large Structures]]
	[[Category: Basle, A]]		[[Category: Basle, A]]
	[[Category: Berrisford, J M]]		[[Category: Berrisford, J M]]

OCA at 16:23, 27 February 2019

2019-02-27T16:23:06Z

←Older revision		Revision as of 16:23, 27 February 2019
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	</div>		</div>
	<div class="pdbe-citations 3zta" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 3zta" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Anti-sigma factor antagonist\|Anti-sigma factor antagonist]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 11:36, 11 August 2016

2016-08-11T11:36:52Z

←Older revision		Revision as of 11:36, 11 August 2016
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		+
	==The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling==		==The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling==
	<StructureSection load='3zta' size='340' side='right' caption='[[3zta]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='3zta' size='340' side='right' caption='[[3zta]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Moorella_thermoacetica Moorella thermoacetica~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35608 Atcc 35608]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [http://www.ebi.ac.uk/pdbsum/3zta PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [http://pdbe.org/3zta PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [http://www.ebi.ac.uk/pdbsum/3zta PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3zta ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 3zta" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Moorella thermoacetica~~]]	+	[[Category: Atcc 35608]]
	[[Category: Basle, A]]		[[Category: Basle, A]]
	[[Category: Berrisford, J M]]		[[Category: Berrisford, J M]]

OCA at 10:20, 4 January 2015

2015-01-04T10:20:57Z

←Older revision		Revision as of 10:20, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>		<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [http://www.ebi.ac.uk/pdbsum/3zta PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [http://www.ebi.ac.uk/pdbsum/3zta PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 13:		Line 13:
	The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.,Quin MB, Berrisford JM, Newman JA, Basle A, Lewis RJ, Marles-Wright J Structure. 2012 Feb 8;20(2):350-63. PMID:22325782<ref>PMID:22325782</ref>		The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.,Quin MB, Berrisford JM, Newman JA, Basle A, Lewis RJ, Marles-Wright J Structure. 2012 Feb 8;20(2):350-63. PMID:22325782<ref>PMID:22325782</ref>

-	From ~~MEDLINEÂ®~~/~~PubMedÂ®~~, a database of the U.S. National Library of Medicine.<br>	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
	== References ==		== References ==
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Moorella thermoacetica]]		[[Category: Moorella thermoacetica]]
-	[[Category: Basle, A.]]	+	[[Category: Basle, A]]
-	[[Category: Berrisford, J M.]]	+	[[Category: Berrisford, J M]]
-	[[Category: Lewis, R J.]]	+	[[Category: Lewis, R J]]
-	[[Category: Marles-Wright, J.]]	+	[[Category: Marles-Wright, J]]
-	[[Category: Newman, J A.]]	+	[[Category: Newman, J A]]
-	[[Category: Quin, M B.]]	+	[[Category: Quin, M B]]
	[[Category: Phosphorylation]]		[[Category: Phosphorylation]]
	[[Category: Protein-protein interaction]]		[[Category: Protein-protein interaction]]

OCA at 07:21, 5 June 2014

2014-06-05T07:21:32Z

←Older revision		Revision as of 07:21, 5 June 2014
Line 1:		Line 1:
-	[[~~Image:~~3zta.~~png~~\|~~left~~\|~~200px~~]]	+	==The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling==
		+	<StructureSection load='3zta' size='340' side='right' caption='[[3zta]], [[Resolution\|resolution]] 2.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZTA FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[3ztb\|3ztb]], [[3zt9\|3zt9]], [[3zxn\|3zxn]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zta OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zta RCSB], [http://www.ebi.ac.uk/pdbsum/3zta PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The stressosome complex regulates downstream effectors in response to environmental signals. In Bacillus subtilis, it activates the alternative sigma factor sigma(B), leading to the upregulation of the general stress regulon. Herein, we characterize a stressosome-regulated biochemical pathway in Moorella thermoacetica. We show that the presumed sensor, MtR, and the scaffold, MtS, form a pseudo-icosahedral structure like that observed in B. subtilis. The N-terminal domain of MtR is structurally homologous to B. subtilis RsbR, despite low sequence identity. The affinity of the switch kinase, MtT, for MtS decreases following MtS phosphorylation and not because of structural reorganization. Dephosphorylation of MtS by the PP2C type phosphatase MtX permits the switch kinase to rebind the stressosome to reset the response. We also show that MtT regulates cyclic di-GMP biosynthesis through inhibition of a GG(D/E)EF-type diguanylate cyclase, demonstrating that secondary messenger levels are regulated by the stressosome.

-	~~<!--~~	+	The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling.,Quin MB, Berrisford JM, Newman JA, Basle A, Lewis RJ, Marles-Wright J Structure. 2012 Feb 8;20(2):350-63. PMID:22325782<ref>PMID:22325782</ref>
-	The ~~line below this paragraph~~, ~~containing "STRUCTURE_3zta"~~, ~~creates the "~~Structure ~~Box" on the page~~.	+
-	~~You may change the PDB parameter~~ (~~which sets the PDB file loaded into the applet~~)	+
-	~~or the SCENE parameter (which sets the initial scene displayed when the page is loaded),~~	+
-	~~or leave the SCENE parameter empty for the default display.~~	+
-	-->	+
-	~~{{STRUCTURE_3zta\| PDB=3zta \| SCENE= }}~~	+

-	~~===The bacterial stressosome:~~ a ~~modular system that has been adapted to control secondary messenger signaling===~~	+	From MEDLINEÂ®/PubMedÂ®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-		+	== References ==
-	~~<!--~~	+	<references/>
-	~~The line below this paragraph, {{ABSTRACT_PUBMED_22325782}}, adds~~ the ~~Publication Abstract to the page~~	+	__TOC__
-	~~(as it appears on PubMed at http://www~~.~~pubmed~~.~~gov), where 22325782 is the PubMed ID number~~.	+	</StructureSection>
-	-->	+
-	~~{{ABSTRACT_PUBMED_22325782}}~~	+
-		+
-	~~==About this Structure==~~	+
-	~~[[3zta]] is a 1 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA].~~	+
-		+
-	==~~Reference~~==	+
-	<~~ref group="xtra">PMID:022325782<~~/~~ref~~><~~references group="xtra"~~/>	+
	[[Category: Moorella thermoacetica]]		[[Category: Moorella thermoacetica]]
	[[Category: Basle, A.]]		[[Category: Basle, A.]]

OCA at 08:48, 29 February 2012

2012-02-29T08:48:31Z

←Older revision		Revision as of 08:48, 29 February 2012
Line 1:		Line 1:
-	[[Image:3zta.~~jpg~~\|left\|200px]]	+	[[Image:3zta.png\|left\|200px]]

	<!--		<!--
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	===The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling===		===The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling===

		+
		+	<!--
		+	The line below this paragraph, {{ABSTRACT_PUBMED_22325782}}, adds the Publication Abstract to the page
		+	(as it appears on PubMed at http://www.pubmed.gov), where 22325782 is the PubMed ID number.
		+	-->
		+	{{ABSTRACT_PUBMED_22325782}}

	==About this Structure==		==About this Structure==

OCA at 07:50, 22 February 2012

2012-02-22T07:50:09Z

←Older revision		Revision as of 07:50, 22 February 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:3zta.jpg\|left\|200px]]

-	The ~~entry 3zta~~ is ~~ON HOLD~~ ~~until Paper Publication~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_3zta", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_3zta\| PDB=3zta \| SCENE= }}

-	~~Authors~~: ~~Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J.~~	+	===The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling===

-	~~Description~~: ~~The bacterial stressosome~~: ~~a modular system that has been adapted to control secondary messenger signaling~~	+
		+	==About this Structure==
		+	[[3zta]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Moorella_thermoacetica Moorella thermoacetica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZTA OCA].
		+
		+	==Reference==
		+	<ref group="xtra">PMID:022325782</ref><references group="xtra"/>
		+	[[Category: Moorella thermoacetica]]
		+	[[Category: Basle, A.]]
		+	[[Category: Berrisford, J M.]]
		+	[[Category: Lewis, R J.]]
		+	[[Category: Marles-Wright, J.]]
		+	[[Category: Newman, J A.]]
		+	[[Category: Quin, M B.]]
		+	[[Category: Phosphorylation]]
		+	[[Category: Protein-protein interaction]]
		+	[[Category: Rsb]]
		+	[[Category: Signal transduction]]
		+	[[Category: Signaling]]
		+	[[Category: Type 2c phosphatase]]

OCA: Protected "3zta" [edit=sysop:move=sysop]

2011-07-13T06:57:52Z

Protected "3zta" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:57, 13 July 2011

OCA: New page: '''Unreleased structure''' The entry 3zta is ON HOLD until Paper Publication Authors: Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J. Description:...

2011-07-13T06:57:49Z

New page: '''Unreleased structure''' The entry 3zta is ON HOLD until Paper Publication Authors: Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J. Description:...

New page

'''Unreleased structure'''

The entry 3zta is ON HOLD until Paper Publication

Authors: Quin, M.B., Berrisford, J.M., Newman, J.A., Basle, A., Lewis, R.J., Marles-Wright, J.

Description: The bacterial stressosome: a modular system that has been adapted to control secondary messenger signaling