4asn - Revision history

OCA at 05:44, 25 August 2022

2022-08-25T05:44:58Z

←Older revision		Revision as of 05:44, 25 August 2022
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	<StructureSection load='4asn' size='340' side='right'caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>		<StructureSection load='4asn' size='340' side='right'caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ASN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ASN FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4aso\|4aso]], [[4ass\|4ass]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[4aso\|4aso]], [[4ass\|4ass]]</div></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4asn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4asn OCA], [~~http~~://pdbe.org/4asn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4asn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4asn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4asn ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4asn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4asn OCA], [https://pdbe.org/4asn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4asn RCSB], [https://www.ebi.ac.uk/pdbsum/4asn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4asn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 12:38, 10 May 2019

2019-05-10T12:38:47Z

←Older revision		Revision as of 12:38, 10 May 2019
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	</StructureSection>		</StructureSection>
	[[Category: Atcc 14581]]		[[Category: Atcc 14581]]
		+	[[Category: Large Structures]]
	[[Category: Aylett, C H.S]]		[[Category: Aylett, C H.S]]
	[[Category: Lowe, J]]		[[Category: Lowe, J]]

OCA at 09:41, 6 March 2019

2019-03-06T09:41:55Z

←Older revision		Revision as of 09:41, 6 March 2019
Line 1:		Line 1:

	==TubR from Bacillus megaterium pBM400==		==TubR from Bacillus megaterium pBM400==
-	<StructureSection load='4asn' size='340' side='right' caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>	+	<StructureSection load='4asn' size='340' side='right'caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ASN FirstGlance]. <br>		<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ASN FirstGlance]. <br>

OCA at 02:54, 11 December 2016

2016-12-11T02:54:06Z

←Older revision		Revision as of 02:54, 11 December 2016
Line 1:		Line 1:
		+
	==TubR from Bacillus megaterium pBM400==		==TubR from Bacillus megaterium pBM400==
	<StructureSection load='4asn' size='340' side='right' caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>		<StructureSection load='4asn' size='340' side='right' caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_megaterium Bacillus megaterium~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ASN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_14581 Atcc 14581]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ASN FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4aso\|4aso]], [[4ass\|4ass]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4aso\|4aso]], [[4ass\|4ass]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4asn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4asn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4asn RCSB], [http://www.ebi.ac.uk/pdbsum/4asn PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4asn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4asn OCA], [http://pdbe.org/4asn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4asn RCSB], [http://www.ebi.ac.uk/pdbsum/4asn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4asn ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4asn" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus megaterium~~]]	+	[[Category: Atcc 14581]]
	[[Category: Aylett, C H.S]]		[[Category: Aylett, C H.S]]
	[[Category: Lowe, J]]		[[Category: Lowe, J]]

OCA at 16:14, 9 December 2014

2014-12-09T16:14:59Z

←Older revision		Revision as of 16:14, 9 December 2014
Line 1:		Line 1:
-	[[~~Image:~~4asn.~~png~~\|~~left~~\|~~200px~~]]	+	==TubR from Bacillus megaterium pBM400==
		+	<StructureSection load='4asn' size='340' side='right' caption='[[4asn]], [[Resolution\|resolution]] 3.50Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_megaterium Bacillus megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ASN FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4aso\|4aso]], [[4ass\|4ass]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4asn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4asn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4asn RCSB], [http://www.ebi.ac.uk/pdbsum/4asn PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Bacterial plasmid partitioning systems segregate plasmids into each daughter cell. In the well-understood ParMRC plasmid partitioning system, adapter protein ParR binds to centromere parC, forming a helix around which the DNA is externally wrapped. This complex stabilizes the growth of a filament of actin-like ParM protein, which pushes the plasmids to the poles. The TubZRC plasmid partitioning system consists of two proteins, tubulin-like TubZ and TubR, and a DNA centromere, tubC, which perform analogous roles to those in ParMRC, despite being unrelated in sequence and structure. We have dissected in detail the binding sites that comprise Bacillus thuringiensis tubC, visualized the TubRC complex by electron microscopy, and determined a crystal structure of TubR bound to the tubC repeat. We show that the TubRC complex takes the form of a flexible DNA-protein filament, formed by lateral coating along the plasmid from tubC, the full length of which is required for the successful in vitro stabilization of TubZ filaments. We also show that TubR from Bacillus megaterium forms a helical superstructure resembling that of ParR. We suggest that the TubRC DNA-protein filament may bind to, and stabilize, the TubZ filament by forming such a ring-like structure around it. The helical superstructure of this TubRC may indicate convergent evolution between the actin-containing ParMRC and tubulin-containing TubZRC systems.

-	~~{{STRUCTURE_4asn\| PDB=4asn \| SCENE= }}~~	+	Superstructure of the centromeric complex of TubZRC plasmid partitioning systems.,Aylett CH, Lowe J Proc Natl Acad Sci U S A. 2012 Oct 9;109(41):16522-7. doi:, 10.1073/pnas.1210899109. Epub 2012 Sep 25. PMID:23010931<ref>PMID:23010931</ref>

-	~~===TubR from Bacillus megaterium pBM400===~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~{{ABSTRACT_PUBMED_23010931}}~~	+	== References ==
-		+	<references/>
-	==~~About this Structure~~==	+	__TOC__
-	~~[[4asn]] is a 3 chain structure with sequence from [http:~~//~~en.wikipedia.org/wiki/Bacillus_megaterium Bacillus megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA].~~	+	</StructureSection>
	[[Category: Bacillus megaterium]]		[[Category: Bacillus megaterium]]
-	[[Category: Aylett, C H.S.]]	+	[[Category: Aylett, C H.S]]
-	[[Category: Lowe, J.]]	+	[[Category: Lowe, J]]
	[[Category: Ftsz]]		[[Category: Ftsz]]
	[[Category: Partition]]		[[Category: Partition]]

OCA at 06:42, 24 October 2012

2012-10-24T06:42:35Z

←Older revision		Revision as of 06:42, 24 October 2012
Line 1:		Line 1:
-	[[Image:4asn.~~jpg~~\|left\|200px]]	+	[[Image:4asn.png\|left\|200px]]

	{{STRUCTURE_4asn\| PDB=4asn \| SCENE= }}		{{STRUCTURE_4asn\| PDB=4asn \| SCENE= }}
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	===TubR from Bacillus megaterium pBM400===		===TubR from Bacillus megaterium pBM400===

		+	{{ABSTRACT_PUBMED_23010931}}

	==About this Structure==		==About this Structure==

OCA at 06:22, 3 October 2012

2012-10-03T06:22:52Z

←Older revision		Revision as of 06:22, 3 October 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4asn.jpg\|left\|200px]]

-	~~The entry~~ 4asn ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_4asn\| PDB=4asn \| SCENE= }}

-	~~Authors: Aylett, C.H.S., Lowe, J.~~	+	===TubR from Bacillus megaterium pBM400===

-	~~Description~~: ~~TubR~~ from Bacillus megaterium ~~pBM400~~	+
		+	==About this Structure==
		+	[[4asn]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_megaterium Bacillus megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ASN OCA].
		+	[[Category: Bacillus megaterium]]
		+	[[Category: Aylett, C H.S.]]
		+	[[Category: Lowe, J.]]
		+	[[Category: Ftsz]]
		+	[[Category: Partition]]
		+	[[Category: Segregation]]
		+	[[Category: Transcription]]
		+	[[Category: Tubulin]]

OCA at 05:20, 30 May 2012

2012-05-30T05:20:52Z

←Older revision		Revision as of 05:20, 30 May 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4asn is ON HOLD	+	The entry 4asn is ON HOLD until Paper Publication

	Authors: Aylett, C.H.S., Lowe, J.		Authors: Aylett, C.H.S., Lowe, J.

	Description: TubR from Bacillus megaterium pBM400		Description: TubR from Bacillus megaterium pBM400

OCA: Protected "4asn" [edit=sysop:move=sysop]

2012-05-09T08:42:12Z

Protected "4asn" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:42, 9 May 2012

OCA: New page: '''Unreleased structure''' The entry 4asn is ON HOLD Authors: Aylett, C.H.S., Lowe, J. Description: TubR from Bacillus megaterium pBM400

2012-05-09T08:42:11Z

New page: '''Unreleased structure''' The entry 4asn is ON HOLD Authors: Aylett, C.H.S., Lowe, J. Description: TubR from Bacillus megaterium pBM400

New page

'''Unreleased structure'''

The entry 4asn is ON HOLD

Authors: Aylett, C.H.S., Lowe, J.

Description: TubR from Bacillus megaterium pBM400