4d5c - Revision history

OCA at 11:17, 9 May 2024

2024-05-09T11:17:51Z

←Older revision		Revision as of 11:17, 9 May 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Proteus_mirabilis Proteus mirabilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D5C FirstGlance]. <br>		<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Proteus_mirabilis Proteus mirabilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D5C FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [https://pdbe.org/4d5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [https://www.ebi.ac.uk/pdbsum/4d5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d5c ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [https://pdbe.org/4d5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [https://www.ebi.ac.uk/pdbsum/4d5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d5c ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/Q9ZI84_PROMI Q9ZI84_PROMI]] TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.[ARBA:ARBA00002856]	+	[https://www.uniprot.org/uniprot/Q9ZI84_PROMI Q9ZI84_PROMI] TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.[ARBA:ARBA00002856]

	==See Also==		==See Also==

OCA at 07:48, 14 September 2022

2022-09-14T07:48:01Z

←Older revision		Revision as of 07:48, 14 September 2022
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	<StructureSection load='4d5c' size='340' side='right'caption='[[4d5c]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='4d5c' size='340' side='right'caption='[[4d5c]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atcc_29906 Atcc 29906~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4D5C FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Proteus_mirabilis Proteus mirabilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4D5C FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4d5f\|4d5f]]~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [https://pdbe.org/4d5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [https://www.ebi.ac.uk/pdbsum/4d5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4d5c ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [~~http~~://pdbe.org/4d5c PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4d5c PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4d5c ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[[https://www.uniprot.org/uniprot/Q9ZI84_PROMI Q9ZI84_PROMI]] TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.[ARBA:ARBA00002856]

	==See Also==		==See Also==
-	*[[Tetracycline repressor protein\|Tetracycline repressor protein]]	+	*[[Tetracycline repressor protein 3D structures\|Tetracycline repressor protein 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 29906]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Hinrichs, W~~]]	+	[[Category: Proteus mirabilis]]
-	[[Category: ~~Palm, G J~~]]	+	[[Category: Hinrichs W]]
-	[[Category: ~~Quast, J~~]]	+	[[Category: Palm GJ]]
-	[[Category: ~~Allostery]]~~	+	[[Category: Quast J]]
-	~~[[Category: Induction]]~~	+
-	~~[[Category: Transcription~~]]	+

OCA at 07:39, 27 March 2019

2019-03-27T07:39:35Z

←Older revision		Revision as of 07:39, 27 March 2019
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		+
	==tetracycline repressor class J, apo form==		==tetracycline repressor class J, apo form==
-	<StructureSection load='4d5c' size='340' side='right' caption='[[4d5c]], [[Resolution\|resolution]] 1.70Å' scene=''>	+	<StructureSection load='4d5c' size='340' side='right'caption='[[4d5c]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D5C FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_29906 Atcc 29906]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D5C FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4d5f\|4d5f]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4d5f\|4d5f]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [http://pdbe.org/4d5c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [http://www.ebi.ac.uk/pdbsum/4d5c PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [http://pdbe.org/4d5c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [http://www.ebi.ac.uk/pdbsum/4d5c PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4d5c ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Tetracycline repressor protein\|Tetracycline repressor protein]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 29906]]
		+	[[Category: Large Structures]]
	[[Category: Hinrichs, W]]		[[Category: Hinrichs, W]]
	[[Category: Palm, G J]]		[[Category: Palm, G J]]

OCA at 17:09, 20 January 2016

2016-01-20T17:09:25Z

←Older revision		Revision as of 17:09, 20 January 2016
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==tetracycline repressor class J, apo form==
-		+	<StructureSection load='4d5c' size='340' side='right' caption='[[4d5c]], [[Resolution\|resolution]] 1.70Å' scene=''>
-	~~The entry~~ 4d5c is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4d5c]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4D5C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4D5C FirstGlance]. <br>
-	~~Authors~~: ~~Palm, G~~.J.~~, Quast, J~~.~~, Hinrichs, W~~.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4d5f\|4d5f]]</td></tr>
-	~~Description~~: ~~tetracycline repressor~~ class ~~J, apo form~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4d5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4d5c OCA], [http://pdbe.org/4d5c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4d5c RCSB], [http://www.ebi.ac.uk/pdbsum/4d5c PDBsum]</span></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Hinrichs, W]]		[[Category: Hinrichs, W]]
		+	[[Category: Palm, G J]]
	[[Category: Quast, J]]		[[Category: Quast, J]]
-	[[Category: ~~Palm, G.J~~]]	+	[[Category: Allostery]]
		+	[[Category: Induction]]
		+	[[Category: Transcription]]

OCA at 07:07, 11 March 2015

2015-03-11T07:07:12Z

←Older revision		Revision as of 07:07, 11 March 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4d5c is ON HOLD	+	The entry 4d5c is ON HOLD until Paper Publication

	Authors: Palm, G.J., Quast, J., Hinrichs, W.		Authors: Palm, G.J., Quast, J., Hinrichs, W.

OCA at 13:50, 24 December 2014

2014-12-24T13:50:09Z

←Older revision		Revision as of 13:50, 24 December 2014
Line 6:		Line 6:

	Description: tetracycline repressor class J, apo form		Description: tetracycline repressor class J, apo form
		+	[[Category: Unreleased Structures]]
		+	[[Category: Hinrichs, W]]
		+	[[Category: Quast, J]]
		+	[[Category: Palm, G.J]]

OCA: Protected "4d5c" [edit=sysop:move=sysop]

2014-11-19T11:07:19Z

Protected "4d5c" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:07, 19 November 2014

OCA: New page: '''Unreleased structure''' The entry 4d5c is ON HOLD Authors: Palm, G.J., Quast, J., Hinrichs, W. Description: tetracycline repressor class J, apo form

2014-11-19T11:07:17Z

New page: '''Unreleased structure''' The entry 4d5c is ON HOLD Authors: Palm, G.J., Quast, J., Hinrichs, W. Description: tetracycline repressor class J, apo form

New page

'''Unreleased structure'''

The entry 4d5c is ON HOLD

Authors: Palm, G.J., Quast, J., Hinrichs, W.

Description: tetracycline repressor class J, apo form