4dap - Revision history

OCA at 10:43, 1 March 2024

2024-03-01T10:43:59Z

←Older revision		Revision as of 10:43, 1 March 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dap]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DAP FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dap]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DAP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [https://pdbe.org/4dap PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [https://www.ebi.ac.uk/pdbsum/4dap PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dap ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [https://pdbe.org/4dap PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [https://www.ebi.ac.uk/pdbsum/4dap PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dap ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[https://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI]] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>	+	[https://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:09, 21 September 2022

2022-09-21T08:09:10Z

←Older revision		Revision as of 08:09, 21 September 2022
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	==The structure of Escherichia coli SfsA==		==The structure of Escherichia coli SfsA==
-	<StructureSection load='4dap' size='340' side='right' caption='[[4dap]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='4dap' size='340' side='right'caption='[[4dap]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dap]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DAP FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dap]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DAP FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4da2\|4da2]], [[4dav\|4dav]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [https://pdbe.org/4dap PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [https://www.ebi.ac.uk/pdbsum/4dap PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dap ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">sfsA, sfs1, b0146, JW0142 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [~~http~~://pdbe.org/4dap PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dap PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dap ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[[~~http~~://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI]] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>	+	[[https://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI]] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
-	[[Category: ~~Allen, F L~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Baker, P J~~]]	+	[[Category: Allen FL]]
-	[[Category: ~~Dna binding protein]]~~	+	[[Category: Baker PJ]]
-	~~[[Category: Nuclease]]~~	+
-	~~[[Category: Ob fold~~]]	+

OCA at 17:42, 5 August 2016

2016-08-05T17:42:40Z

←Older revision		Revision as of 17:42, 5 August 2016
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		+
	==The structure of Escherichia coli SfsA==		==The structure of Escherichia coli SfsA==
	<StructureSection load='4dap' size='340' side='right' caption='[[4dap]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='4dap' size='340' side='right' caption='[[4dap]], [[Resolution\|resolution]] 2.20Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4da2\|4da2]], [[4dav\|4dav]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4da2\|4da2]], [[4dav\|4dav]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">sfsA, sfs1, b0146, JW0142 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">sfsA, sfs1, b0146, JW0142 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [http://www.ebi.ac.uk/pdbsum/4dap PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [http://pdbe.org/4dap PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [http://www.ebi.ac.uk/pdbsum/4dap PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dap ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 04:32, 25 December 2014

2014-12-25T04:32:37Z

←Older revision		Revision as of 04:32, 25 December 2014
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [http://www.ebi.ac.uk/pdbsum/4dap PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [http://www.ebi.ac.uk/pdbsum/4dap PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI]] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Ecoli]]		[[Category: Ecoli]]
-	[[Category: Allen, F L.]]	+	[[Category: Allen, F L]]
-	[[Category: Baker, P J.]]	+	[[Category: Baker, P J]]
	[[Category: Dna binding protein]]		[[Category: Dna binding protein]]
	[[Category: Nuclease]]		[[Category: Nuclease]]
	[[Category: Ob fold]]		[[Category: Ob fold]]

OCA at 08:46, 20 October 2014

2014-10-20T08:46:17Z

←Older revision		Revision as of 08:46, 20 October 2014
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-	~~{{STRUCTURE_4dap\| PDB~~=~~4dap \| SCENE= }}~~	+	==The structure of Escherichia coli SfsA==
-	~~===DNA Binding Protein~~===	+	<StructureSection load='4dap' size='340' side='right' caption='[[4dap]], [[Resolution\|resolution]] 2.20Å' scene=''>
-		+	== Structural highlights ==
-	==~~Function~~==	+	<table><tr><td colspan='2'>[[4dap]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DAP FirstGlance]. <br>
-	[[~~http://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI~~]] ~~Binds to DNA non-specifically~~. ~~Could be a regulatory factor involved in maltose metabolism.<ref~~>~~PMID:2013578</ref> <ref>PMID:11272834</ref>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4da2\|4da2]], [[4dav\|4dav]]</td></tr>
-	==~~About this Structure~~==	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">sfsA, sfs1, b0146, JW0142 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
-	[[4dap]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli_k-12 Escherichia coli k-12~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA].	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dap FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dap OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dap RCSB], [http://www.ebi.ac.uk/pdbsum/4dap PDBsum]</span></td></tr>
-		+	</table>
-	==~~Reference~~==	+	__TOC__
-	<~~references group~~="~~xtra~~"/><~~references~~/>	+	</StructureSection>
-	[[Category: ~~Escherichia coli k-12~~]]	+	[[Category: Ecoli]]
	[[Category: Allen, F L.]]		[[Category: Allen, F L.]]
	[[Category: Baker, P J.]]		[[Category: Baker, P J.]]

OCA at 07:58, 14 August 2013

2013-08-14T07:58:15Z

←Older revision		Revision as of 07:58, 14 August 2013
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4dap\| PDB=4dap \| SCENE= }}
		+	===DNA Binding Protein===

-	~~The entry 4dap is ON HOLD~~ ~~until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/SFSA_ECOLI SFSA_ECOLI]] Binds to DNA non-specifically. Could be a regulatory factor involved in maltose metabolism.<ref>PMID:2013578</ref> <ref>PMID:11272834</ref>

-	~~Authors~~: ~~Baker, P~~.J.~~, Allen, F~~.L.	+	==About this Structure==
		+	[[4dap]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DAP OCA].

-	~~Description~~: ~~DNA Binding Protein~~	+	==Reference==
		+	<references group="xtra"/><references/>
		+	[[Category: Escherichia coli k-12]]
		+	[[Category: Allen, F L.]]
		+	[[Category: Baker, P J.]]
		+	[[Category: Dna binding protein]]
		+	[[Category: Nuclease]]
		+	[[Category: Ob fold]]

OCA at 09:43, 13 March 2013

2013-03-13T09:43:39Z

←Older revision		Revision as of 09:43, 13 March 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dap is ON HOLD	+	The entry 4dap is ON HOLD until Paper Publication

	Authors: Baker, P.J., Allen, F.L.		Authors: Baker, P.J., Allen, F.L.

	Description: DNA Binding Protein		Description: DNA Binding Protein

OCA: Protected "4dap" [edit=sysop:move=sysop]

2012-01-25T06:09:43Z

Protected "4dap" [edit=sysop:move=sysop]

←Older revision

Revision as of 06:09, 25 January 2012

OCA: New page: '''Unreleased structure''' The entry 4dap is ON HOLD Authors: Baker, P.J., Allen, F.L. Description: DNA Binding Protein

2012-01-25T06:09:42Z

New page: '''Unreleased structure''' The entry 4dap is ON HOLD Authors: Baker, P.J., Allen, F.L. Description: DNA Binding Protein

New page

'''Unreleased structure'''

The entry 4dap is ON HOLD

Authors: Baker, P.J., Allen, F.L.

Description: DNA Binding Protein