4dmi - Revision history

OCA at 10:52, 1 March 2024

2024-03-01T10:52:10Z

←Older revision		Revision as of 10:52, 1 March 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DMI FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [https://pdbe.org/4dmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [https://www.ebi.ac.uk/pdbsum/4dmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dmi ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [https://pdbe.org/4dmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [https://www.ebi.ac.uk/pdbsum/4dmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dmi ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:28, 21 September 2022

2022-09-21T08:28:22Z

←Older revision		Revision as of 08:28, 21 September 2022
Line 3:		Line 3:
	<StructureSection load='4dmi' size='340' side='right'caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4dmi' size='340' side='right'caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Miscellaneous_nucleic_acid Miscellaneous nucleic acid~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4DMI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [~~http~~://pdbe.org/4dmi PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4dmi PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4dmi ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [https://pdbe.org/4dmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [https://www.ebi.ac.uk/pdbsum/4dmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dmi ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Miscellaneous nucleic acid~~]]	+	[[Category: Unidentified]]
-	[[Category: Abendroth, J]]	+	[[Category: Abendroth J]]
-	[[Category: ~~Craig, T K~~]]	+	[[Category: Burgin Jr AB]]
-	[[Category: ~~Jr, A B.Burgin~~]]	+	[[Category: Craig TK]]
-	[[Category: Lorimer, D]]	+	[[Category: Lorimer D]]
-	[[Category: Rohwer, F]]	+	[[Category: Rohwer F]]
-	[[Category: Segall, A]]	+	[[Category: Segall A]]
-	~~[[Category: Capsid protein]]~~	+
-	~~[[Category: Viral protein~~]]	+

OCA at 07:22, 27 March 2019

2019-03-27T07:22:31Z

←Older revision		Revision as of 07:22, 27 March 2019
Line 1:		Line 1:

	==Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)==		==Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)==
-	<StructureSection load='4dmi' size='340' side='right' caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='4dmi' size='340' side='right'caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Miscellaneous_nucleic_acid Miscellaneous nucleic acid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Miscellaneous_nucleic_acid Miscellaneous nucleic acid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
Line 9:		Line 9:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Miscellaneous nucleic acid]]		[[Category: Miscellaneous nucleic acid]]
	[[Category: Abendroth, J]]		[[Category: Abendroth, J]]

OCA at 08:59, 11 August 2016

2016-08-11T08:59:53Z

←Older revision		Revision as of 08:59, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)==		==Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)==
	<StructureSection load='4dmi' size='340' side='right' caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4dmi' size='340' side='right' caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Unidentified Unidentified~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Miscellaneous_nucleic_acid Miscellaneous nucleic acid]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [http://www.ebi.ac.uk/pdbsum/4dmi PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [http://pdbe.org/4dmi PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [http://www.ebi.ac.uk/pdbsum/4dmi PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dmi ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Unidentified~~]]	+	[[Category: Miscellaneous nucleic acid]]
	[[Category: Abendroth, J]]		[[Category: Abendroth, J]]
	[[Category: Craig, T K]]		[[Category: Craig, T K]]

OCA at 12:17, 4 January 2015

2015-01-04T12:17:24Z

←Older revision		Revision as of 12:17, 4 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>		<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [http://www.ebi.ac.uk/pdbsum/4dmi PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [http://www.ebi.ac.uk/pdbsum/4dmi PDBsum]</span></td></tr>
-	<table>	+	</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Unidentified]]		[[Category: Unidentified]]
-	[[Category: Abendroth, J.]]	+	[[Category: Abendroth, J]]
-	[[Category: Craig, T K.]]	+	[[Category: Craig, T K]]
-	[[Category: Jr, A B.Burgin.]]	+	[[Category: Jr, A B.Burgin]]
-	[[Category: Lorimer, D.]]	+	[[Category: Lorimer, D]]
-	[[Category: Rohwer, F.]]	+	[[Category: Rohwer, F]]
-	[[Category: Segall, A.]]	+	[[Category: Segall, A]]
	[[Category: Capsid protein]]		[[Category: Capsid protein]]
	[[Category: Viral protein]]		[[Category: Viral protein]]

OCA at 09:10, 11 June 2014

2014-06-11T09:10:29Z

←Older revision		Revision as of 09:10, 11 June 2014
Line 1:		Line 1:
-	~~[[Image:4dmi.jpg\|left\|200px]]~~	+	==Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)==
-		+	<StructureSection load='4dmi' size='340' side='right' caption='[[4dmi]], [[Resolution\|resolution]] 1.50Å' scene=''>
-	~~{{STRUCTURE_4dmi\| PDB=4dmi \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DMI FirstGlance]. <br>
-	===Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)===	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene><br>
-		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dmi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4dmi RCSB], [http://www.ebi.ac.uk/pdbsum/4dmi PDBsum]</span></td></tr>
-		+	<table>
-	==~~About this Structure~~==	+	__TOC__
-	[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA].	+	</StructureSection>
	[[Category: Unidentified]]		[[Category: Unidentified]]
	[[Category: Abendroth, J.]]		[[Category: Abendroth, J.]]

OCA at 05:21, 29 August 2012

2012-08-29T05:21:51Z

←Older revision		Revision as of 05:21, 29 August 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4dmi.jpg\|left\|200px]]

-	~~The entry~~ 4dmi ~~is ON HOLD~~ ~~until Paper Publication~~	+	{{STRUCTURE_4dmi\| PDB=4dmi \| SCENE= }}

-	~~Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin Jr, A.B., Segall, A., Rohwer, F.~~	+	===Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)===

-	~~Description: Crystal~~ Structure of a ~~Pentameric Capsid Protein Isolated~~ from ~~Metagenomic Phage Sequences (CASP)~~	+
		+	==About this Structure==
		+	[[4dmi]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Unidentified Unidentified]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DMI OCA].
		+	[[Category: Unidentified]]
		+	[[Category: Abendroth, J.]]
		+	[[Category: Craig, T K.]]
		+	[[Category: Jr, A B.Burgin.]]
		+	[[Category: Lorimer, D.]]
		+	[[Category: Rohwer, F.]]
		+	[[Category: Segall, A.]]
		+	[[Category: Capsid protein]]
		+	[[Category: Viral protein]]

OCA at 07:26, 18 April 2012

2012-04-18T07:26:51Z

←Older revision		Revision as of 07:26, 18 April 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dmi is ON HOLD	+	The entry 4dmi is ON HOLD until Paper Publication

-	Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin, A.B. Jr, Segall, A., Rohwer, F.	+	Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin Jr, A.B., Segall, A., Rohwer, F.

	Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)		Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)

OCA at 07:11, 21 March 2012

2012-03-21T07:11:42Z

←Older revision		Revision as of 07:11, 21 March 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dmi is ON HOLD ~~until Aug 26 2013~~	+	The entry 4dmi is ON HOLD

	Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin, A.B. Jr, Segall, A., Rohwer, F.		Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin, A.B. Jr, Segall, A., Rohwer, F.

	Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)		Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)

OCA at 08:23, 29 February 2012

2012-02-29T08:23:02Z

←Older revision		Revision as of 08:23, 29 February 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4dmi is ON HOLD until ~~Paper Publication~~	+	The entry 4dmi is ON HOLD until Aug 26 2013

	Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin, A.B. Jr, Segall, A., Rohwer, F.		Authors: Craig, T.K., Abendroth, J., Lorimer, D., Burgin, A.B. Jr, Segall, A., Rohwer, F.

-	Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences	+	Description: Crystal Structure of a Pentameric Capsid Protein Isolated from Metagenomic Phage Sequences (CASP)