4eqb - Revision history

OCA at 15:07, 14 March 2024

2024-03-14T15:07:11Z

←Older revision

Revision as of 15:07, 14 March 2024

OCA at 04:08, 7 October 2022

2022-10-07T04:08:59Z

←Older revision		Revision as of 04:08, 7 October 2022
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	==1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES==		==1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES==
-	<StructureSection load='4eqb' size='340' side='right' caption='[[4eqb]], [[Resolution\|resolution]] 1.50Å' scene=''>	+	<StructureSection load='4eqb' size='340' side='right'caption='[[4eqb]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4eqb]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Strp0 Strp0~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4EQB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4eqb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TCH8431/19A Streptococcus pneumoniae TCH8431/19A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EQB FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HMPREF0837_11161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=525381 STRP0])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [https://pdbe.org/4eqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [https://www.ebi.ac.uk/pdbsum/4eqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eqb ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [~~http~~://pdbe.org/4eqb PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4eqb PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4eqb ProSAT]</span></td></tr>	+
	</table>		</table>
		+
		+	==See Also==
		+	*[[ABC transporter 3D structures\|ABC transporter 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Strp0~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Anderson, W F~~]]	+	[[Category: Streptococcus pneumoniae TCH8431/19A]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: Anderson WF]]
-	[[Category: Kudritska, M]]	+	[[Category: Kudritska M]]
-	[[Category: Minasov, G]]	+	[[Category: Minasov G]]
-	[[Category: Savchenko, A]]	+	[[Category: Savchenko A]]
-	[[Category: Stogios~~, P J~~]]	+	[[Category: Stogios PJ]]
-	[[Category: Wawrzak, Z]]	+	[[Category: Wawrzak Z]]
-	[[Category: Yim, V]]	+	[[Category: Yim V]]
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: National institute of allergy and infectious disease]]~~	+
-	~~[[Category: Niaid]]~~	+
-	~~[[Category: Periplasmic protein]]~~	+
-	~~[[Category: Spermidine/putrescine abc transporter]]~~	+
-	~~[[Category: Transport protein~~]]	+

OCA at 08:06, 15 November 2017

2017-11-15T08:06:47Z

←Older revision		Revision as of 08:06, 15 November 2017
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [http://pdbe.org/4eqb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [http://www.ebi.ac.uk/pdbsum/4eqb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4eqb ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [http://pdbe.org/4eqb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [http://www.ebi.ac.uk/pdbsum/4eqb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4eqb ProSAT]</span></td></tr>
	</table>		</table>
-
-	==See Also==
-	*[[ABC transporter\|ABC transporter]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 19:05, 5 August 2016

2016-08-05T19:05:24Z

←Older revision		Revision as of 19:05, 5 August 2016
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		+
	==1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES==		==1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES==
	<StructureSection load='4eqb' size='340' side='right' caption='[[4eqb]], [[Resolution\|resolution]] 1.50Å' scene=''>		<StructureSection load='4eqb' size='340' side='right' caption='[[4eqb]], [[Resolution\|resolution]] 1.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Streptococcus_pneumoniae_tch8431/19a Streptococcus pneumoniae tch8431/19a~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EQB FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strp0 Strp0]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EQB FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HMPREF0837_11161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=525381 ~~Streptococcus pneumoniae TCH8431/19A~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HMPREF0837_11161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=525381 STRP0])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [http://www.ebi.ac.uk/pdbsum/4eqb PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [http://pdbe.org/4eqb PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [http://www.ebi.ac.uk/pdbsum/4eqb PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4eqb ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[ABC transporter\|ABC transporter]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Streptococcus pneumoniae tch8431/19a~~]]	+	[[Category: Strp0]]
	[[Category: Anderson, W F]]		[[Category: Anderson, W F]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]

OCA at 11:31, 21 December 2014

2014-12-21T11:31:15Z

←Older revision		Revision as of 11:31, 21 December 2014
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-	~~{{STRUCTURE_4eqb\| PDB=4eqb \| SCENE= }}~~	+	==1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES==
-	===1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES===	+	<StructureSection load='4eqb' size='340' side='right' caption='[[4eqb]], [[Resolution\|resolution]] 1.50Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tch8431/19a Streptococcus pneumoniae tch8431/19a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4EQB FirstGlance]. <br>
-	[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tch8431/19a Streptococcus pneumoniae tch8431/19a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">HMPREF0837_11161 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=525381 Streptococcus pneumoniae TCH8431/19A])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4eqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eqb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4eqb RCSB], [http://www.ebi.ac.uk/pdbsum/4eqb PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Streptococcus pneumoniae tch8431/19a]]		[[Category: Streptococcus pneumoniae tch8431/19a]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Kudritska, M.]]	+	[[Category: Kudritska, M]]
-	[[Category: Minasov, G.]]	+	[[Category: Minasov, G]]
-	[[Category: Savchenko, A.]]	+	[[Category: Savchenko, A]]
-	[[Category: Stogios, P J.]]	+	[[Category: Stogios, P J]]
-	[[Category: Wawrzak, Z.]]	+	[[Category: Wawrzak, Z]]
-	[[Category: Yim, V~~.]]~~	+	[[Category: Yim, V]]
-	~~[[Category: Center for structural genomics of infectious disease~~]]	+
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: National institute of allergy and infectious disease]]		[[Category: National institute of allergy and infectious disease]]
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	[[Category: Periplasmic protein]]		[[Category: Periplasmic protein]]
	[[Category: Spermidine/putrescine abc transporter]]		[[Category: Spermidine/putrescine abc transporter]]
-	[[Category: Structural genomic]]
	[[Category: Transport protein]]		[[Category: Transport protein]]

OCA at 19:27, 17 April 2013

2013-04-17T19:27:43Z

←Older revision		Revision as of 19:27, 17 April 2013
Line 1:		Line 1:
-	[[Image:4eqb.jpg\|left\|200px]]
-
-	<!--
-	The line below this paragraph, containing "STRUCTURE_4eqb", creates the "Structure Box" on the page.
-	You may change the PDB parameter (which sets the PDB file loaded into the applet)
-	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-	or leave the SCENE parameter empty for the default display.
-	-->
	{{STRUCTURE_4eqb\| PDB=4eqb \| SCENE= }}		{{STRUCTURE_4eqb\| PDB=4eqb \| SCENE= }}
-		+	===1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein PotD from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES===
-	===1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.===	+
-		+

	==About this Structure==		==About this Structure==
-	[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacteria Bacteria~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA].	+	[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_tch8431/19a Streptococcus pneumoniae tch8431/19a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA].
-	[[Category: ~~Bacteria~~]]	+	[[Category: Streptococcus pneumoniae tch8431/19a]]
	[[Category: Anderson, W F.]]		[[Category: Anderson, W F.]]
	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]		[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]

OCA at 19:31, 2 May 2012

2012-05-02T19:31:57Z

←Older revision		Revision as of 19:31, 2 May 2012
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4eqb.jpg\|left\|200px]]

-	The ~~entry 4eqb~~ is ~~ON HOLD~~	+	<!--
		+	The line below this paragraph, containing "STRUCTURE_4eqb", creates the "Structure Box" on the page.
		+	You may change the PDB parameter (which sets the PDB file loaded into the applet)
		+	or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
		+	or leave the SCENE parameter empty for the default display.
		+	-->
		+	{{STRUCTURE_4eqb\| PDB=4eqb \| SCENE= }}

-	~~Authors: Minasov, G~~.~~, Wawrzak, Z~~.~~, Stogios, P. J., Kudritska, M. , Yim, V. , Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)~~	+	===1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.===

-	~~Description~~: 1.~~5 Angstrom Crystal Structure of Spermidine~~/~~Putrescine ABC Transporter Substrate-Binding Protein~~ from ~~Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES~~.	+
		+	==About this Structure==
		+	[[4eqb]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EQB OCA].
		+	[[Category: Bacteria]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
		+	[[Category: Kudritska, M.]]
		+	[[Category: Minasov, G.]]
		+	[[Category: Savchenko, A.]]
		+	[[Category: Stogios, P J.]]
		+	[[Category: Wawrzak, Z.]]
		+	[[Category: Yim, V.]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: Niaid]]
		+	[[Category: Periplasmic protein]]
		+	[[Category: Spermidine/putrescine abc transporter]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transport protein]]

OCA: Protected "4eqb" [edit=sysop:move=sysop]

2012-04-25T08:57:15Z

Protected "4eqb" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:57, 25 April 2012

OCA: New page: '''Unreleased structure''' The entry 4eqb is ON HOLD Authors: Minasov, G., Wawrzak, Z., Stogios, P. J., Kudritska, M. , Yim, V. , Savchenko, A., Anderson, W.F., Center for Structural Ge...

2012-04-25T08:57:14Z

New page: '''Unreleased structure''' The entry 4eqb is ON HOLD Authors: Minasov, G., Wawrzak, Z., Stogios, P. J., Kudritska, M. , Yim, V. , Savchenko, A., Anderson, W.F., Center for Structural Ge...

New page

'''Unreleased structure'''

The entry 4eqb is ON HOLD

Authors: Minasov, G., Wawrzak, Z., Stogios, P. J., Kudritska, M. , Yim, V. , Savchenko, A., Anderson, W.F., Center for Structural Genomics of Infectious Diseases (CSGID)

Description: 1.5 Angstrom Crystal Structure of Spermidine/Putrescine ABC Transporter Substrate-Binding Protein from Streptococcus pneumoniae strain Canada MDR_19A in Complex with Calcium and HEPES.