4gwo - Revision history

OCA at 14:02, 8 November 2023

2023-11-08T14:02:41Z

←Older revision		Revision as of 14:02, 8 November 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GWO FirstGlance]. <br>		<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GWO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.394Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [https://pdbe.org/4gwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [https://www.ebi.ac.uk/pdbsum/4gwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gwo ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [https://pdbe.org/4gwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [https://www.ebi.ac.uk/pdbsum/4gwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gwo ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:23, 26 October 2022

2022-10-26T07:23:34Z

←Older revision		Revision as of 07:23, 26 October 2022
Line 1:		Line 1:

	==Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2==		==Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2==
-	<StructureSection load='4gwo' size='340' side='right' caption='[[4gwo]], [[Resolution\|resolution]] 2.39Å' scene=''>	+	<StructureSection load='4gwo' size='340' side='right'caption='[[4gwo]], [[Resolution\|resolution]] 2.39Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Salty Salty~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4GWO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4GWO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4gxa\|4gxa]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [https://pdbe.org/4gwo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [https://www.ebi.ac.uk/pdbsum/4gwo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4gwo ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">cysB, STM1713 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [~~http~~://pdbe.org/4gwo PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4gwo PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4gwo ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/CYSB_SALTY CYSB_SALTY]] This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription.	+	[https://www.uniprot.org/uniprot/CYSB_SALTY CYSB_SALTY] This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription.

	==See Also==		==See Also==
-	*[[Transcriptional activator\|Transcriptional activator]]	+	*[[Transcriptional activator 3D structures\|Transcriptional activator 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Salty~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Kumaran, S~~]]	+	[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
-	[[Category: ~~Mittal, M~~]]	+	[[Category: Kumaran S]]
-	[[Category: ~~Singh, A K~~]]	+	[[Category: Mittal M]]
-	[[Category: ~~Alpha/beta fold]]~~	+	[[Category: Singh AK]]
-	~~[[Category: Cysb]]~~	+
-	~~[[Category: Dna binding]]~~	+
-	~~[[Category: Gene regulation]]~~	+
-	~~[[Category: Lttr]]~~	+
-	~~[[Category: N-acetyl serine binding]]~~	+
-	~~[[Category: Sulfate]]~~	+
-	~~[[Category: Transcription regulation~~]]	+

OCA at 18:15, 4 August 2016

2016-08-04T18:15:23Z

←Older revision		Revision as of 18:15, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2==		==Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2==
	<StructureSection load='4gwo' size='340' side='right' caption='[[4gwo]], [[Resolution\|resolution]] 2.39Å' scene=''>		<StructureSection load='4gwo' size='340' side='right' caption='[[4gwo]], [[Resolution\|resolution]] 2.39Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._lt2 Salmonella enterica subsp. enterica serovar typhimurium str. lt2~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GWO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salty Salty]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GWO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4gxa\|4gxa]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4gxa\|4gxa]]</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">cysB, STM1713 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 ~~Salmonella enterica subsp. enterica serovar Typhimurium str. LT2~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">cysB, STM1713 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 SALTY])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [http://www.ebi.ac.uk/pdbsum/4gwo PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [http://pdbe.org/4gwo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [http://www.ebi.ac.uk/pdbsum/4gwo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4gwo ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 15:		Line 16:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Salmonella enterica subsp. enterica serovar typhimurium str. lt2~~]]	+	[[Category: Salty]]
	[[Category: Kumaran, S]]		[[Category: Kumaran, S]]
	[[Category: Mittal, M]]		[[Category: Mittal, M]]

OCA at 18:05, 24 December 2014

2014-12-24T18:05:23Z

←Older revision		Revision as of 18:05, 24 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4gwo\| PDB=4gwo \| SCENE= }}~~	+	==Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2==
-	===Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2===	+	<StructureSection load='4gwo' size='340' side='right' caption='[[4gwo]], [[Resolution\|resolution]] 2.39Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4gwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._lt2 Salmonella enterica subsp. enterica serovar typhimurium str. lt2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GWO FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4gxa\|4gxa]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">cysB, STM1713 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=99287 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gwo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gwo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gwo RCSB], [http://www.ebi.ac.uk/pdbsum/4gwo PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/CYSB_SALTY CYSB_SALTY]] This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription.		[[http://www.uniprot.org/uniprot/CYSB_SALTY CYSB_SALTY]] This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription.

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4gwo~~]] ~~is a 2 chain structure with sequence from [http:~~//en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._lt2 Salmonella enterica subsp. enterica serovar typhimurium str. lt2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA].	+	*[[Transcriptional activator\|Transcriptional activator]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. lt2]]		[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. lt2]]
-	[[Category: Kumaran, S.]]	+	[[Category: Kumaran, S]]
-	[[Category: Mittal, M.]]	+	[[Category: Mittal, M]]
-	[[Category: Singh, A K.]]	+	[[Category: Singh, A K]]
	[[Category: Alpha/beta fold]]		[[Category: Alpha/beta fold]]
	[[Category: Cysb]]		[[Category: Cysb]]

OCA at 10:57, 4 September 2013

2013-09-04T10:57:21Z

←Older revision		Revision as of 10:57, 4 September 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4gwo\| PDB=4gwo \| SCENE= }}
		+	===Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2===

-	The ~~entry 4gwo~~ is ~~ON HOLD until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/CYSB_SALTY CYSB_SALTY]] This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription.

-	~~Authors~~: Mittal, M., Singh, A.K.~~, Kumaran, S.~~	+	==About this Structure==
-		+	[[4gwo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium_str._lt2 Salmonella enterica subsp. enterica serovar typhimurium str. lt2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GWO OCA].
-	~~Description~~: ~~Crystal structure of ligand~~ binding ~~domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2~~	+	[[Category: Salmonella enterica subsp. enterica serovar typhimurium str. lt2]]
		+	[[Category: Kumaran, S.]]
		+	[[Category: Mittal, M.]]
		+	[[Category: Singh, A K.]]
		+	[[Category: Alpha/beta fold]]
		+	[[Category: Cysb]]
		+	[[Category: Dna binding]]
		+	[[Category: Gene regulation]]
		+	[[Category: Lttr]]
		+	[[Category: N-acetyl serine binding]]
		+	[[Category: Sulfate]]
		+	[[Category: Transcription regulation]]

OCA at 05:45, 3 October 2012

2012-10-03T05:45:29Z

←Older revision		Revision as of 05:45, 3 October 2012
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4gwo is ON HOLD	+	The entry 4gwo is ON HOLD until Paper Publication

	Authors: Mittal, M., Singh, A.K., Kumaran, S.		Authors: Mittal, M., Singh, A.K., Kumaran, S.

	Description: Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2		Description: Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2

OCA: Protected "4gwo" [edit=sysop:move=sysop]

2012-09-12T04:54:50Z

Protected "4gwo" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:54, 12 September 2012

OCA: New page: '''Unreleased structure''' The entry 4gwo is ON HOLD Authors: Mittal, M., Singh, A.K., Kumaran, S. Description: Crystal structure of ligand binding domain of LysR family member,CysB in...

2012-09-12T04:54:49Z

New page: '''Unreleased structure''' The entry 4gwo is ON HOLD Authors: Mittal, M., Singh, A.K., Kumaran, S. Description: Crystal structure of ligand binding domain of LysR family member,CysB in...

New page

'''Unreleased structure'''

The entry 4gwo is ON HOLD

Authors: Mittal, M., Singh, A.K., Kumaran, S.

Description: Crystal structure of ligand binding domain of LysR family member,CysB in complex with sulfate from Salmonella typhimurium LT2