4il2 - Revision history

OCA at 11:57, 1 March 2024

2024-03-01T11:57:34Z

←Older revision		Revision as of 11:57, 1 March 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_CFT073 Escherichia coli CFT073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_CFT073 Escherichia coli CFT073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.95Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [https://pdbe.org/4il2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [https://www.ebi.ac.uk/pdbsum/4il2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4il2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [https://pdbe.org/4il2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [https://www.ebi.ac.uk/pdbsum/4il2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4il2 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 20:53, 16 November 2022

2022-11-16T20:53:10Z

←Older revision		Revision as of 20:53, 16 November 2022
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	==Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)==		==Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)==
-	<StructureSection load='4il2' size='340' side='right' caption='[[4il2]], [[Resolution\|resolution]] 1.95Å' scene=''>	+	<StructureSection load='4il2' size='340' side='right'caption='[[4il2]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecol6 Ecol6~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_CFT073 Escherichia coli CFT073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c1971, rspA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=199310 ECOL6])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [https://pdbe.org/4il2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [https://www.ebi.ac.uk/pdbsum/4il2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4il2 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [~~http~~://pdbe.org/4il2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4il2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4il2 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/MAND_ECOL6 MAND_ECOL6]] Has low D-mannonate dehydratase activity (in vitro), suggesting that this is not a physiological substrate and that it has no significant role in D-mannonate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>	+	[https://www.uniprot.org/uniprot/MAND_ECOL6 MAND_ECOL6] Has low D-mannonate dehydratase activity (in vitro), suggesting that this is not a physiological substrate and that it has no significant role in D-mannonate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecol6~~]]	+	[[Category: Escherichia coli CFT073]]
-	[[Category: Gerlt~~, J A~~]]	+	[[Category: Large Structures]]
-	[[Category: Imker~~, H J~~]]	+	[[Category: Gerlt JA]]
-	[[Category: Lukk, T]]	+	[[Category: Imker HJ]]
-	[[Category: Nair~~, S K~~]]	+	[[Category: Lukk T]]
-	[[Category: Wichelecki, D]]	+	[[Category: Nair SK]]
-	~~[[Category: Lyase]]~~	+	[[Category: Wichelecki D]]
-	~~[[Category: Tim-barrel~~]]	+

OCA at 09:57, 4 August 2016

2016-08-04T09:57:02Z

←Older revision		Revision as of 09:57, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)==		==Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)==
	<StructureSection load='4il2' size='340' side='right' caption='[[4il2]], [[Resolution\|resolution]] 1.95Å' scene=''>		<StructureSection load='4il2' size='340' side='right' caption='[[4il2]], [[Resolution\|resolution]] 1.95Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Escherichia_coli_cft073 Escherichia coli cft073~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecol6 Ecol6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c1971, rspA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=199310 ~~Escherichia coli CFT073~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c1971, rspA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=199310 ECOL6])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [http://www.ebi.ac.uk/pdbsum/4il2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [http://pdbe.org/4il2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [http://www.ebi.ac.uk/pdbsum/4il2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4il2 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[[http://www.uniprot.org/uniprot/~~Q8FHC7_ECOL6 Q8FHC7_ECOL6~~]] Has low D-mannonate dehydratase activity (in vitro), suggesting that this is not a physiological substrate and that it has no significant role in D-mannonate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>	+	[[http://www.uniprot.org/uniprot/MAND_ECOL6 MAND_ECOL6]] Has low D-mannonate dehydratase activity (in vitro), suggesting that this is not a physiological substrate and that it has no significant role in D-mannonate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Escherichia coli cft073~~]]	+	[[Category: Ecol6]]
	[[Category: Gerlt, J A]]		[[Category: Gerlt, J A]]
	[[Category: Imker, H J]]		[[Category: Imker, H J]]

OCA at 08:06, 25 December 2014

2014-12-25T08:06:06Z

←Older revision		Revision as of 08:06, 25 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [http://www.ebi.ac.uk/pdbsum/4il2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [http://www.ebi.ac.uk/pdbsum/4il2 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q8FHC7_ECOL6 Q8FHC7_ECOL6]] Has low D-mannonate dehydratase activity (in vitro), suggesting that this is not a physiological substrate and that it has no significant role in D-mannonate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:55, 10 December 2014

2014-12-10T16:55:27Z

←Older revision		Revision as of 16:55, 10 December 2014
Line 1:		Line 1:
-	~~[[Image:4il2.jpg\|left\|200px]]~~	+	==Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)==
-		+	<StructureSection load='4il2' size='340' side='right' caption='[[4il2]], [[Resolution\|resolution]] 1.95Å' scene=''>
-	~~{{STRUCTURE_4il2\| PDB=4il2 \| SCENE= }}~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4il2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_cft073 Escherichia coli cft073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IL2 FirstGlance]. <br>
-	===Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)===	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">c1971, rspA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=199310 Escherichia coli CFT073])</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4il2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4il2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4il2 RCSB], [http://www.ebi.ac.uk/pdbsum/4il2 PDBsum]</span></td></tr>
-	==~~About this Structure~~==	+	</table>
-	[[4il2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_cft073 Escherichia coli cft073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA].	+	__TOC__
		+	</StructureSection>
	[[Category: Escherichia coli cft073]]		[[Category: Escherichia coli cft073]]
-	[[Category: Gerlt, J A.]]	+	[[Category: Gerlt, J A]]
-	[[Category: Imker, H J.]]	+	[[Category: Imker, H J]]
-	[[Category: Lukk, T.]]	+	[[Category: Lukk, T]]
-	[[Category: Nair, S K.]]	+	[[Category: Nair, S K]]
-	[[Category: Wichelecki, D.]]	+	[[Category: Wichelecki, D]]
	[[Category: Lyase]]		[[Category: Lyase]]
	[[Category: Tim-barrel]]		[[Category: Tim-barrel]]

OCA at 14:01, 20 February 2013

2013-02-20T14:01:06Z

←Older revision		Revision as of 14:01, 20 February 2013
Line 1:		Line 1:
-	~~'''Unreleased structure'''~~	+	[[Image:4il2.jpg\|left\|200px]]

-	~~The entry~~ 4il2 ~~is ON HOLD~~	+	{{STRUCTURE_4il2\| PDB=4il2 \| SCENE= }}

-	~~Authors: Lukk, T., Wichelecki,~~ D.~~, Imker, H.J., Gerlt, J.A., Nair, S.K.~~	+	===Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)===

-	~~Description: Crystal~~ structure ~~of D-mannonate dehydratase (rspA)~~ from E. coli ~~CFT073 (EFI TARGET EFI~~-~~501585)~~	+
		+	==About this Structure==
		+	[[4il2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_cft073 Escherichia coli cft073]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IL2 OCA].
		+	[[Category: Escherichia coli cft073]]
		+	[[Category: Gerlt, J A.]]
		+	[[Category: Imker, H J.]]
		+	[[Category: Lukk, T.]]
		+	[[Category: Nair, S K.]]
		+	[[Category: Wichelecki, D.]]
		+	[[Category: Lyase]]
		+	[[Category: Tim-barrel]]

OCA: Protected "4il2" [edit=sysop:move=sysop]

2013-01-09T07:51:14Z

Protected "4il2" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:51, 9 January 2013

OCA: New page: '''Unreleased structure''' The entry 4il2 is ON HOLD Authors: Lukk, T., Wichelecki, D., Imker, H.J., Gerlt, J.A., Nair, S.K. Description: Crystal structure of D-mannonate dehydratase (...

2013-01-09T07:51:13Z

New page: '''Unreleased structure''' The entry 4il2 is ON HOLD Authors: Lukk, T., Wichelecki, D., Imker, H.J., Gerlt, J.A., Nair, S.K. Description: Crystal structure of D-mannonate dehydratase (...

New page

'''Unreleased structure'''

The entry 4il2 is ON HOLD

Authors: Lukk, T., Wichelecki, D., Imker, H.J., Gerlt, J.A., Nair, S.K.

Description: Crystal structure of D-mannonate dehydratase (rspA) from E. coli CFT073 (EFI TARGET EFI-501585)