4jk0 - Revision history

OCA at 15:00, 5 August 2016

2016-08-05T15:00:53Z

←Older revision		Revision as of 15:00, 5 August 2016
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		+
	==Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU==		==Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU==
	<StructureSection load='4jk0' size='340' side='right' caption='[[4jk0]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='4jk0' size='340' side='right' caption='[[4jk0]], [[Resolution\|resolution]] 2.30Å' scene=''>
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	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4jgn\|4jgn]], [[4j39\|4j39]], [[1r9f\|1r9f]], [[4e48\|4e48]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4jgn\|4jgn]], [[4j39\|4j39]], [[1r9f\|1r9f]], [[4e48\|4e48]]</td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ORF4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12145 TBSV])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ORF4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12145 TBSV])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jk0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jk0 RCSB], [http://www.ebi.ac.uk/pdbsum/4jk0 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jk0 OCA], [http://pdbe.org/4jk0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4jk0 RCSB], [http://www.ebi.ac.uk/pdbsum/4jk0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4jk0 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 19:46, 25 December 2014

2014-12-25T19:46:23Z

←Older revision		Revision as of 19:46, 25 December 2014
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-	~~{{STRUCTURE_4jk0\| PDB=4jk0 \| SCENE= }}~~	+	==Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU==
-	===Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU===	+	<StructureSection load='4jk0' size='340' side='right' caption='[[4jk0]], [[Resolution\|resolution]] 2.30Å' scene=''>
-		+	== Structural highlights ==
-	==Function==	+	<table><tr><td colspan='2'>[[4jk0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Tbsv Tbsv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JK0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4JK0 FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4jgn\|4jgn]], [[4j39\|4j39]], [[1r9f\|1r9f]], [[4e48\|4e48]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ORF4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=12145 TBSV])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4jk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4jk0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4jk0 RCSB], [http://www.ebi.ac.uk/pdbsum/4jk0 PDBsum]</span></td></tr>
		+	</table>
		+	== Function ==
	[[http://www.uniprot.org/uniprot/P19_TBSVK P19_TBSVK]] Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA (By similarity).		[[http://www.uniprot.org/uniprot/P19_TBSVK P19_TBSVK]] Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA (By similarity).

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4jk0~~]] ~~is a 2 chain structure. Full crystallographic information is available from~~ [~~http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=4JK0 OCA~~].	+	*[[P19\|P19]]
-	[[Category: Katorcha, E.]]	+	*[[RNA silencing suppressor\|RNA silencing suppressor]]
-	[[Category: Malinina, L.]]	+	__TOC__
-	[[Category: Popov, A N.]]	+	</StructureSection>
-	[[Category: Tamjar, J.]]	+	[[Category: Tbsv]]
		+	[[Category: Katorcha, E]]
		+	[[Category: Malinina, L]]
		+	[[Category: Popov, A N]]
		+	[[Category: Tamjar, J]]
	[[Category: Dimer]]		[[Category: Dimer]]
	[[Category: Protein-rna complex]]		[[Category: Protein-rna complex]]

OCA at 13:57, 12 March 2014

2014-03-12T13:57:58Z

←Older revision		Revision as of 13:57, 12 March 2014
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-	~~'''Unreleased~~ structure'''	+	{{STRUCTURE_4jk0\| PDB=4jk0 \| SCENE= }}
		+	===Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU===

-	~~The entry 4jk0 is ON HOLD until Paper Publication~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/P19_TBSVK P19_TBSVK]] Viral suppressor of RNA silencing which binds specifically to silencing RNAs (siRNAs). Acts as a molecular caliper to specifically select siRNAs based on the length of the duplex region of the RNA (By similarity).

-	~~Authors~~: Katorcha, E., ~~Tamjar, J~~., Popov, A.N., ~~Malinina, L~~.	+	==About this Structure==
-		+	[[4jk0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4JK0 OCA].
-	~~Description~~: ~~Crystal structure of T89Q~~-~~mutant of RNA silencing suppressor p19 with 2nt~~-~~5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU~~	+	[[Category: Katorcha, E.]]
		+	[[Category: Malinina, L.]]
		+	[[Category: Popov, A N.]]
		+	[[Category: Tamjar, J.]]
		+	[[Category: Dimer]]
		+	[[Category: Protein-rna complex]]
		+	[[Category: Rna binding protein-rna complex]]
		+	[[Category: Rna silencing suppression]]
		+	[[Category: Trinucleotide repeat]]

OCA at 00:55, 4 April 2013

2013-04-04T00:55:05Z

←Older revision		Revision as of 00:55, 4 April 2013
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4jk0 is ON HOLD	+	The entry 4jk0 is ON HOLD until Paper Publication

	Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L.		Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L.

-	Description: Crystal structure of ~~p19_T89Q in complex~~ with double-helical RNA ~~19mer~~ pUUUG(CUG)5CU	+	Description: Crystal structure of T89Q-mutant of RNA silencing suppressor p19 with 2nt-5'-overhanging double-helical RNA 21mer pUUUG(CUG)5CU

OCA: Protected "4jk0" [edit=sysop:move=sysop]

2013-03-20T16:20:52Z

Protected "4jk0" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:20, 20 March 2013

OCA: New page: '''Unreleased structure''' The entry 4jk0 is ON HOLD Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L. Description: Crystal structure of p19_T89Q in complex with double-heli...

2013-03-20T16:20:51Z

New page: '''Unreleased structure''' The entry 4jk0 is ON HOLD Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L. Description: Crystal structure of p19_T89Q in complex with double-heli...

New page

'''Unreleased structure'''

The entry 4jk0 is ON HOLD

Authors: Katorcha, E., Tamjar, J., Popov, A.N., Malinina, L.

Description: Crystal structure of p19_T89Q in complex with double-helical RNA 19mer pUUUG(CUG)5CU