4kem - Revision history

OCA at 15:58, 20 September 2023

2023-09-20T15:58:28Z

←Older revision		Revision as of 15:58, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azospirillum_sp._B510 Azospirillum sp. B510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KEM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azospirillum_sp._B510 Azospirillum sp. B510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KEM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.3Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [https://pdbe.org/4kem PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [https://www.ebi.ac.uk/pdbsum/4kem PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kem ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [https://pdbe.org/4kem PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [https://www.ebi.ac.uk/pdbsum/4kem PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kem ProSAT]</span></td></tr>
	</table>		</table>

OCA at 11:54, 30 November 2022

2022-11-30T11:54:38Z

←Older revision		Revision as of 11:54, 30 November 2022
Line 1:		Line 1:

	==Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site==		==Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site==
-	<StructureSection load='4kem' size='340' side='right' caption='[[4kem]], [[Resolution\|resolution]] 1.30Å' scene=''>	+	<StructureSection load='4kem' size='340' side='right'caption='[[4kem]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Azos1 Azos1~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4KEM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azospirillum_sp._B510 Azospirillum sp. B510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KEM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AZL_d02920 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=137722 AZOS1])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [https://pdbe.org/4kem PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [https://www.ebi.ac.uk/pdbsum/4kem PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4kem ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [~~http~~://pdbe.org/4kem PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4kem PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4kem ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D3P639_AZOS1 D3P639_AZOS1]
		+
		+	==See Also==
		+	*[[Mandelate racemase/muconate lactonizing enzyme 3D structures\|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Azos1~~]]	+	[[Category: Azospirillum sp. B510]]
-	[[Category: ~~Almo, S C~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~EFI, Enzyme Function Initiative~~]]	+	[[Category: Almo SC]]
-	[[Category: Gerlt~~, J A~~]]	+	[[Category: Gerlt JA]]
-	[[Category: Hillerich, B]]	+	[[Category: Hillerich B]]
-	[[Category: Imker~~, H J~~]]	+	[[Category: Imker HJ]]
-	[[Category: Love, J]]	+	[[Category: Love J]]
-	[[Category: Morisco~~, L L~~]]	+	[[Category: Morisco LL]]
-	[[Category: Seidel~~, R D~~]]	+	[[Category: Seidel RD]]
-	[[Category: Sojitra, S]]	+	[[Category: Sojitra S]]
-	[[Category: Stead, M]]	+	[[Category: Stead M]]
-	[[Category: Vetting~~, M W~~]]	+	[[Category: Vetting MW]]
-	[[Category: Wasserman~~, S R~~]]	+	[[Category: Wasserman SR]]
-	[[Category: Wichelecki, D]]	+	[[Category: Wichelecki D]]
-	~~[[Category: Efi]]~~	+
-	~~[[Category: Enzyme function initiative]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Mandelate racemase family]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Tartrate dehydratase~~]]	+

OCA at 09:53, 11 August 2016

2016-08-11T09:53:01Z

←Older revision		Revision as of 09:53, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site==		==Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site==
	<StructureSection load='4kem' size='340' side='right' caption='[[4kem]], [[Resolution\|resolution]] 1.30Å' scene=''>		<StructureSection load='4kem' size='340' side='right' caption='[[4kem]], [[Resolution\|resolution]] 1.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Azospirillum_sp._b510 Azospirillum sp. b510~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KEM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azos1 Azos1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KEM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AZL_d02920 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=137722 ~~Azospirillum sp. B510~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AZL_d02920 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=137722 AZOS1])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [http://www.ebi.ac.uk/pdbsum/4kem PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [http://pdbe.org/4kem PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [http://www.ebi.ac.uk/pdbsum/4kem PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4kem ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Azospirillum sp. b510~~]]	+	[[Category: Azos1]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: EFI, Enzyme Function Initiative]]		[[Category: EFI, Enzyme Function Initiative]]

OCA at 13:36, 4 January 2015

2015-01-04T13:36:05Z

←Older revision		Revision as of 13:36, 4 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_4kem\| PDB=4kem \| SCENE= }}~~	+	==Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site==
-	===Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site===	+	<StructureSection load='4kem' size='340' side='right' caption='[[4kem]], [[Resolution\|resolution]] 1.30Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4kem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_sp._b510 Azospirillum sp. b510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KEM FirstGlance]. <br>
-	[[4kem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_sp._b510 Azospirillum sp. b510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AKR:ACRYLIC+ACID'>AKR</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">AZL_d02920 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=137722 Azospirillum sp. B510])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4kem FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4kem OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4kem RCSB], [http://www.ebi.ac.uk/pdbsum/4kem PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
	[[Category: Azospirillum sp. b510]]		[[Category: Azospirillum sp. b510]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: EFI, Enzyme Function Initiative.]]	+	[[Category: EFI, Enzyme Function Initiative]]
-	[[Category: Gerlt, J A.]]	+	[[Category: Gerlt, J A]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Imker, H J.]]	+	[[Category: Imker, H J]]
-	[[Category: Love, J.]]	+	[[Category: Love, J]]
-	[[Category: Morisco, L L.]]	+	[[Category: Morisco, L L]]
-	[[Category: Seidel, R D.]]	+	[[Category: Seidel, R D]]
-	[[Category: Sojitra, S.]]	+	[[Category: Sojitra, S]]
-	[[Category: Stead, M.]]	+	[[Category: Stead, M]]
-	[[Category: Vetting, M W.]]	+	[[Category: Vetting, M W]]
-	[[Category: Wasserman, S R.]]	+	[[Category: Wasserman, S R]]
-	[[Category: Wichelecki, D.]]	+	[[Category: Wichelecki, D]]
	[[Category: Efi]]		[[Category: Efi]]
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]

OCA at 07:34, 16 May 2013

2013-05-16T07:34:47Z

←Older revision		Revision as of 07:34, 16 May 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4kem\| PDB=4kem \| SCENE= }}
		+	===Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site===

-	~~The entry~~ 4kem is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4kem]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_sp._b510 Azospirillum sp. b510]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KEM OCA].
-	~~Authors~~: ~~Vetting, M~~.W.~~, Wichelecki, D~~.~~, Morisco, L~~.L.~~, Wasserman, S~~.R.~~, Sojitra~~, S., ~~Stead, M~~., Hillerich, B., Love, J., Seidel, R.D., ~~Imker, H.J~~., ~~Gerlt, J~~.~~A., Armstrong~~, ~~R.N~~.~~, Almo~~, S.C., Enzyme ~~Function Initiative (EFI)~~	+	[[Category: Azospirillum sp. b510]]
-		+	[[Category: Almo, S C.]]
-	~~Description~~: ~~Crystal structure of a tartrate~~ dehydratase ~~from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site~~	+	[[Category: EFI, Enzyme Function Initiative.]]
		+	[[Category: Gerlt, J A.]]
		+	[[Category: Hillerich, B.]]
		+	[[Category: Imker, H J.]]
		+	[[Category: Love, J.]]
		+	[[Category: Morisco, L L.]]
		+	[[Category: Seidel, R D.]]
		+	[[Category: Sojitra, S.]]
		+	[[Category: Stead, M.]]
		+	[[Category: Vetting, M W.]]
		+	[[Category: Wasserman, S R.]]
		+	[[Category: Wichelecki, D.]]
		+	[[Category: Efi]]
		+	[[Category: Enzyme function initiative]]
		+	[[Category: Lyase]]
		+	[[Category: Mandelate racemase family]]
		+	[[Category: Structural genomic]]
		+	[[Category: Tartrate dehydratase]]

OCA at 07:20, 8 May 2013

2013-05-08T07:20:58Z

←Older revision		Revision as of 07:20, 8 May 2013
Line 5:		Line 5:
	Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)		Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)

-	Description: ~~CRYSTAL STRUCTURE OF A TARTRATE DEHYDRATASE FROM AZOSPIRILLUM~~, ~~TARGET EFI~~-502395, ~~WITH BOUND MG AND A PUTATIVE ACRYLATE ION~~, ~~ORDERED ACTIVE SITE~~	+	Description: Crystal structure of a tartrate dehydratase from azospirillum, target efi-502395, with bound mg and a putative acrylate ion, ordered active site

OCA: Protected "4kem" [edit=sysop:move=sysop]

2013-05-02T07:18:55Z

Protected "4kem" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:18, 2 May 2013

OCA: New page: '''Unreleased structure''' The entry 4kem is ON HOLD Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D...

2013-05-02T07:18:54Z

New page: '''Unreleased structure''' The entry 4kem is ON HOLD Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D...

New page

'''Unreleased structure'''

The entry 4kem is ON HOLD

Authors: Vetting, M.W., Wichelecki, D., Morisco, L.L., Wasserman, S.R., Sojitra, S., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Armstrong, R.N., Almo, S.C., Enzyme Function Initiative (EFI)

Description: CRYSTAL STRUCTURE OF A TARTRATE DEHYDRATASE FROM AZOSPIRILLUM, TARGET EFI-502395, WITH BOUND MG AND A PUTATIVE ACRYLATE ION, ORDERED ACTIVE SITE