4ksm - Revision history

OCA at 12:15, 1 March 2024

2024-03-01T12:15:15Z

←Older revision		Revision as of 12:15, 1 March 2024
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KSM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KSM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.4Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [https://pdbe.org/4ksm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [https://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [https://pdbe.org/4ksm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [https://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>
	</table>		</table>

OCA at 09:11, 7 December 2022

2022-12-07T09:11:25Z

←Older revision		Revision as of 09:11, 7 December 2022
Line 3:		Line 3:
	<StructureSection load='4ksm' size='340' side='right'caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='4ksm' size='340' side='right'caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Ecoli Ecoli~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4KSM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4KSM FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [https://pdbe.org/4ksm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [https://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">grxB, b1064, JW1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [~~http~~://pdbe.org/4ksm PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GLRX2_ECOLI GLRX2_ECOLI]] Involved in reducing some disulfide bonds in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase.	+	[https://www.uniprot.org/uniprot/GLRX2_ECOLI GLRX2_ECOLI] Involved in reducing some disulfide bonds in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Ecoli~~]]	+	[[Category: Escherichia coli K-12]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Rosen~~, B P~~]]	+	[[Category: Rosen BP]]
-	[[Category: Venkadesh, S]]	+	[[Category: Venkadesh S]]
-	[[Category: Ye, J]]	+	[[Category: Ye J]]
-	~~[[Category: Electron transport]]~~	+
-	~~[[Category: Glutaredoxin]]~~	+
-	~~[[Category: Glutathione~~]]	+

OCA at 08:52, 3 April 2019

2019-04-03T08:52:39Z

←Older revision		Revision as of 08:52, 3 April 2019
Line 1:		Line 1:

	==Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione==		==Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione==
-	<StructureSection load='4ksm' size='340' side='right' caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>	+	<StructureSection load='4ksm' size='340' side='right'caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KSM FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KSM FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">grxB, b1064, JW1051 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://pdbe.org/4ksm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://pdbe.org/4ksm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>
	</table>		</table>
Line 12:		Line 13:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Ecoli]]
		+	[[Category: Large Structures]]
	[[Category: Rosen, B P]]		[[Category: Rosen, B P]]
	[[Category: Venkadesh, S]]		[[Category: Venkadesh, S]]

OCA at 17:11, 4 August 2016

2016-08-04T17:11:23Z

←Older revision		Revision as of 17:11, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione==		==Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione==
	<StructureSection load='4ksm' size='340' side='right' caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>		<StructureSection load='4ksm' size='340' side='right' caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://pdbe.org/4ksm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ksm ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 17:24, 24 December 2014

2014-12-24T17:24:38Z

←Older revision		Revision as of 17:24, 24 December 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KSM FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KSM FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum]</span></td></tr>
-	<table>	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GLRX2_ECOLI GLRX2_ECOLI]] Involved in reducing some disulfide bonds in a coupled system with glutathione reductase. Does not act as hydrogen donor for ribonucleotide reductase.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Rosen, B P.]]	+	[[Category: Rosen, B P]]
-	[[Category: Venkadesh, S.]]	+	[[Category: Venkadesh, S]]
-	[[Category: Ye, J.]]	+	[[Category: Ye, J]]
	[[Category: Electron transport]]		[[Category: Electron transport]]
	[[Category: Glutaredoxin]]		[[Category: Glutaredoxin]]
	[[Category: Glutathione]]		[[Category: Glutathione]]

OCA at 09:19, 21 May 2014

2014-05-21T09:19:36Z

←Older revision		Revision as of 09:19, 21 May 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione==
-		+	<StructureSection load='4ksm' size='340' side='right' caption='[[4ksm]], [[Resolution\|resolution]] 2.40Å' scene=''>
-	~~The entry~~ 4ksm is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4ksm]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KSM OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KSM FirstGlance]. <br>
-	~~Authors~~: Ye, J., ~~Venkadesh, S~~., Rosen, B.P.	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene><br>
-		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4kx4\|4kx4]]</td></tr>
-	~~Description~~: ~~Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione~~	+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ksm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ksm OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ksm RCSB], [http://www.ebi.ac.uk/pdbsum/4ksm PDBsum]</span></td></tr>
		+	<table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Rosen, B P.]]
		+	[[Category: Venkadesh, S.]]
		+	[[Category: Ye, J.]]
		+	[[Category: Electron transport]]
		+	[[Category: Glutaredoxin]]
		+	[[Category: Glutathione]]

OCA at 12:44, 20 November 2013

2013-11-20T12:44:12Z

←Older revision		Revision as of 12:44, 20 November 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ksm is ON HOLD	+	The entry 4ksm is ON HOLD until Paper Publication

	Authors: Ye, J., Venkadesh, S., Rosen, B.P.		Authors: Ye, J., Venkadesh, S., Rosen, B.P.

	Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione		Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione

OCA at 05:36, 10 October 2013

2013-10-10T05:36:35Z

←Older revision		Revision as of 05:36, 10 October 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ksm is ON HOLD ~~until Paper Publication~~	+	The entry 4ksm is ON HOLD

	Authors: Ye, J., Venkadesh, S., Rosen, B.P.		Authors: Ye, J., Venkadesh, S., Rosen, B.P.

	Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione		Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione

OCA at 07:25, 29 September 2013

2013-09-29T07:25:28Z

←Older revision		Revision as of 07:25, 29 September 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ksm is ON HOLD	+	The entry 4ksm is ON HOLD until Paper Publication

	Authors: Ye, J., Venkadesh, S., Rosen, B.P.		Authors: Ye, J., Venkadesh, S., Rosen, B.P.

	Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione		Description: Crystal structure of Escherichia coli glutraredoxin 2 C9S/C12S mutant without glutathione

OCA: Protected "4ksm" [edit=sysop:move=sysop]

2013-06-19T11:59:17Z

Protected "4ksm" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:59, 19 June 2013