4m1q - Revision history

OCA at 10:47, 21 December 2022

2022-12-21T10:47:13Z

←Older revision		Revision as of 10:47, 21 December 2022
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	==Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.==		==Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.==
-	<StructureSection load='4m1q' size='340' side='right' caption='[[4m1q]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='4m1q' size='340' side='right'caption='[[4m1q]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4m1q]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Bacie Bacie~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4M1Q FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4m1q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_selenitireducens_MLS10 Bacillus selenitireducens MLS10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M1Q FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=~~PO4~~:~~PHOSPHATE+ION~~'>~~PO4~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene~~></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m1q OCA], [https://pdbe.org/4m1q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m1q RCSB], [https://www.ebi.ac.uk/pdbsum/4m1q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m1q ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ldh, Bsel_2311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=439292 BACIE])</td></tr>	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4m1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m1q OCA], [~~http~~://pdbe.org/4m1q PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4m1q RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4m1q PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4m1q ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/D6XW60_BACIE D6XW60_BACIE]

	==See Also==		==See Also==
-	*[[Lactate ~~Dehydrogenase~~\|Lactate ~~Dehydrogenase~~]]	+	*[[Lactate dehydrogenase 3D structures\|Lactate dehydrogenase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacie]]~~	+	[[Category: Large Structures]]
-	~~[[Category: L-lactate dehydrogenase~~]]	+	[[Category: Almo SC]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Bhosle R]]
-	[[Category: Bhosle, R]]	+	[[Category: Bonanno JB]]
-	[[Category: Bonanno~~, J B~~]]	+	[[Category: Celikgil A]]
-	[[Category: Celikgil, A]]	+	[[Category: Chamala S]]
-	[[Category: Chamala, S]]	+	[[Category: Chan MK]]
-	[[Category: Chan~~, M K~~]]	+	[[Category: Evans B]]
-	[[Category: Evans, B]]	+	[[Category: Fiser A]]
-	[[Category: Fiser, A]]	+	[[Category: Garforth S]]
-	[[Category: Garforth, S]]	+	[[Category: Gizzi A]]
-	[[Category: Gizzi, A]]	+	[[Category: Hillerich B]]
-	[[Category: Hillerich, B]]	+	[[Category: Kar A]]
-	[[Category: Kar, A]]	+	[[Category: Khafizov K]]
-	[[Category: Khafizov, K]]	+	[[Category: Lafluer J]]
-	[[Category: Lafluer, J]]	+	[[Category: Lim S]]
-	[[Category: Lim, S]]	+	[[Category: Love J]]
-	[[Category: Love, J]]	+	[[Category: Malashkevich VN]]
-	[[Category: Malashkevich~~, V N~~]]	+	[[Category: Matikainen B]]
-	[[Category: Matikainen, B]]	+	[[Category: Patel H]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Seidel R]]
-	[[Category: Patel, H]]	+	[[Category: Toro R]]
-	[[Category: Seidel, R]]	+	[[Category: Villegas G]]
-	[[Category: Toro, R]]	+
-	[[Category: Villegas, G]]	+
-	~~[[Category: Nysgrc]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: PSI, Protein structure initiative]]~~	+
-	~~[[Category: Psi-biology~~]]	+

OCA at 16:03, 11 August 2016

2016-08-11T16:03:44Z

←Older revision		Revision as of 16:03, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.==		==Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.==
	<StructureSection load='4m1q' size='340' side='right' caption='[[4m1q]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='4m1q' size='340' side='right' caption='[[4m1q]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4m1q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/~~Bacillus_selenitireducens_mls10 Bacillus selenitireducens mls10~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M1Q FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4m1q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacie Bacie]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M1Q FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ldh, Bsel_2311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=439292 ~~Bacillus selenitireducens MLS10~~])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ldh, Bsel_2311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=439292 BACIE])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m1q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4m1q RCSB], [http://www.ebi.ac.uk/pdbsum/4m1q PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m1q OCA], [http://pdbe.org/4m1q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4m1q RCSB], [http://www.ebi.ac.uk/pdbsum/4m1q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4m1q ProSAT]</span></td></tr>
	</table>		</table>

Line 14:		Line 15:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Bacillus selenitireducens mls10~~]]	+	[[Category: Bacie]]
	[[Category: L-lactate dehydrogenase]]		[[Category: L-lactate dehydrogenase]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]

OCA at 12:35, 5 January 2015

2015-01-05T12:35:03Z

←Older revision		Revision as of 12:35, 5 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_4m1q\| PDB=4m1q \| SCENE= }}~~	+	==Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.==
-	===Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.===	+	<StructureSection load='4m1q' size='340' side='right' caption='[[4m1q]], [[Resolution\|resolution]] 1.60Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4m1q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_selenitireducens_mls10 Bacillus selenitireducens mls10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M1Q FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">ldh, Bsel_2311 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=439292 Bacillus selenitireducens MLS10])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/L-lactate_dehydrogenase L-lactate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.27 1.1.1.27] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m1q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m1q OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4m1q RCSB], [http://www.ebi.ac.uk/pdbsum/4m1q PDBsum]</span></td></tr>
		+	</table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4m1q~~]] ~~is a 2 chain structure with sequence from [http:~~/~~/en.wikipedia.org/wiki/Bacillus_selenitireducens_mls10 Bacillus selenitireducens mls10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA].~~	+	*[[Lactate Dehydrogenase\|Lactate Dehydrogenase]]
		+	__TOC__
		+	</StructureSection>
	[[Category: Bacillus selenitireducens mls10]]		[[Category: Bacillus selenitireducens mls10]]
	[[Category: L-lactate dehydrogenase]]		[[Category: L-lactate dehydrogenase]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Bhosle, R.]]	+	[[Category: Bhosle, R]]
-	[[Category: Bonanno, J B.]]	+	[[Category: Bonanno, J B]]
-	[[Category: Celikgil, A.]]	+	[[Category: Celikgil, A]]
-	[[Category: Chamala, S.]]	+	[[Category: Chamala, S]]
-	[[Category: Chan, M K.]]	+	[[Category: Chan, M K]]
-	[[Category: Evans, B.]]	+	[[Category: Evans, B]]
-	[[Category: Fiser, A.]]	+	[[Category: Fiser, A]]
-	[[Category: Garforth, S.]]	+	[[Category: Garforth, S]]
-	[[Category: Gizzi, A.]]	+	[[Category: Gizzi, A]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Kar, A.]]	+	[[Category: Kar, A]]
-	[[Category: Khafizov, K.]]	+	[[Category: Khafizov, K]]
-	[[Category: Lafluer, J.]]	+	[[Category: Lafluer, J]]
-	[[Category: Lim, S.]]	+	[[Category: Lim, S]]
-	[[Category: Love, J.]]	+	[[Category: Love, J]]
-	[[Category: Malashkevich, V N.]]	+	[[Category: Malashkevich, V N]]
-	[[Category: Matikainen, B.]]	+	[[Category: Matikainen, B]]
-	[[Category: ~~NYSGRC, New York~~ Structural ~~Genomics Research Consortium.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Patel, H.]]	+	[[Category: Patel, H]]
-	[[Category: Seidel, R.]]	+	[[Category: Seidel, R]]
-	[[Category: Toro, R.]]	+	[[Category: Toro, R]]
-	[[Category: Villegas, G~~.]]~~	+	[[Category: Villegas, G]]
-	~~[[Category: L-lactate dehydrogenase]]~~	+
-	~~[[Category: New york structural genomics research consortium~~]]	+
	[[Category: Nysgrc]]		[[Category: Nysgrc]]
	[[Category: Oxidoreductase]]		[[Category: Oxidoreductase]]
-	[[Category: Protein structure initiative]]	+	[[Category: PSI, Protein structure initiative]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]

OCA at 08:38, 21 August 2013

2013-08-21T08:38:36Z

←Older revision		Revision as of 08:38, 21 August 2013
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4m1q\| PDB=4m1q \| SCENE= }}
		+	===Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.===

-	~~The entry~~ 4m1q is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4m1q]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_selenitireducens_mls10 Bacillus selenitireducens mls10]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M1Q OCA].
-	~~Authors~~: ~~MALASHKEVICH~~, V.~~N.,~~ Bhosle,R., ~~Toro,R., Hillerich,~~B.~~, Gizzi~~,A.~~, Garforth~~,S.~~, Kar, A.,~~ Chan, M. K.~~, Lafluer,J., Patel,H., Matikainen~~,B., ~~Chamala, S~~.~~, Lim~~,S.~~, Celikgil~~,A.~~, Villegas, G., Evans~~,B.~~, Love,J., Fiser~~,A., Khafizov,K., ~~Seidel~~,R.~~, Bonanno~~, J. B., ~~Almo, S.C~~., New York Structural Genomics Research Consortium ~~(NYSGRC)~~	+	[[Category: Bacillus selenitireducens mls10]]
-		+	[[Category: L-lactate dehydrogenase]]
-	~~Description~~: ~~Crystal structure of~~ L-lactate dehydrogenase ~~from Bacillus selenitireducens MLS10, NYSGRC Target 029814.~~	+	[[Category: Almo, S C.]]
		+	[[Category: Bhosle, R.]]
		+	[[Category: Bonanno, J B.]]
		+	[[Category: Celikgil, A.]]
		+	[[Category: Chamala, S.]]
		+	[[Category: Chan, M K.]]
		+	[[Category: Evans, B.]]
		+	[[Category: Fiser, A.]]
		+	[[Category: Garforth, S.]]
		+	[[Category: Gizzi, A.]]
		+	[[Category: Hillerich, B.]]
		+	[[Category: Kar, A.]]
		+	[[Category: Khafizov, K.]]
		+	[[Category: Lafluer, J.]]
		+	[[Category: Lim, S.]]
		+	[[Category: Love, J.]]
		+	[[Category: Malashkevich, V N.]]
		+	[[Category: Matikainen, B.]]
		+	[[Category: NYSGRC, New York Structural Genomics Research Consortium.]]
		+	[[Category: Patel, H.]]
		+	[[Category: Seidel, R.]]
		+	[[Category: Toro, R.]]
		+	[[Category: Villegas, G.]]
		+	[[Category: L-lactate dehydrogenase]]
		+	[[Category: New york structural genomics research consortium]]
		+	[[Category: Nysgrc]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Protein structure initiative]]
		+	[[Category: Psi-biology]]
		+	[[Category: Structural genomic]]

OCA: Protected "4m1q" [edit=sysop:move=sysop]

2013-08-14T07:22:23Z

Protected "4m1q" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:22, 14 August 2013

OCA: New page: '''Unreleased structure''' The entry 4m1q is ON HOLD Authors: MALASHKEVICH, V.N., Bhosle,R., Toro,R., Hillerich,B., Gizzi,A., Garforth,S., Kar, A., Chan, M. K., Lafluer,J., Patel,H., Ma...

2013-08-14T07:22:21Z

New page: '''Unreleased structure''' The entry 4m1q is ON HOLD Authors: MALASHKEVICH, V.N., Bhosle,R., Toro,R., Hillerich,B., Gizzi,A., Garforth,S., Kar, A., Chan, M. K., Lafluer,J., Patel,H., Ma...

New page

'''Unreleased structure'''

The entry 4m1q is ON HOLD

Authors: MALASHKEVICH, V.N., Bhosle,R., Toro,R., Hillerich,B., Gizzi,A., Garforth,S., Kar, A., Chan, M. K., Lafluer,J., Patel,H., Matikainen,B., Chamala, S., Lim,S., Celikgil,A., Villegas, G., Evans,B., Love,J., Fiser,A., Khafizov,K., Seidel,R., Bonanno, J. B., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)

Description: Crystal structure of L-lactate dehydrogenase from Bacillus selenitireducens MLS10, NYSGRC Target 029814.