4ndq - Revision history

OCA at 16:54, 20 September 2023

2023-09-20T16:54:59Z

←Older revision		Revision as of 16:54, 20 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii_DJ Azotobacter vinelandii DJ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii_DJ Azotobacter vinelandii DJ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.751Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [https://pdbe.org/4ndq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [https://www.ebi.ac.uk/pdbsum/4ndq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ndq ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [https://pdbe.org/4ndq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [https://www.ebi.ac.uk/pdbsum/4ndq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ndq ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:23, 11 January 2023

2023-01-11T08:23:55Z

←Older revision		Revision as of 08:23, 11 January 2023
Line 3:		Line 3:
	<StructureSection load='4ndq' size='340' side='right'caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='4ndq' size='340' side='right'caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Azotobacter_vinelandii~~ Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii_DJ Azotobacter vinelandii DJ]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [https://pdbe.org/4ndq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [https://www.ebi.ac.uk/pdbsum/4ndq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ndq ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [~~http~~://pdbe.org/4ndq PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ndq PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ndq ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/MOSB_AZOVD MOSB_AZOVD~~]] Intracellular storage of molybdenum. Binds polyoxomolybdates. Can bind at least 90 molybdenum atoms per protein molecule. [[http://www.uniprot.org/uniprot/MOSA_AZOVD MOSA_AZOVD]~~] Intracellular storage of molybdenum. Binds polyoxomolybdates. Can bind at least 90 molybdenum atoms per protein molecule.	+	[https://www.uniprot.org/uniprot/MOSB_AZOVD MOSB_AZOVD] Intracellular storage of molybdenum. Binds polyoxomolybdates. Can bind at least 90 molybdenum atoms per protein molecule.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Azotobacter vinelandii]]	+	[[Category: Azotobacter vinelandii DJ]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Demmer, U]]	+	[[Category: Demmer U]]
-	[[Category: Ermler, U]]	+	[[Category: Ermler U]]
-	[[Category: Poppe, J]]	+	[[Category: Poppe J]]
-	[[Category: Warkentin, E]]	+	[[Category: Warkentin E]]
-	~~[[Category: Atp binding]]~~	+
-	~~[[Category: Metal binding protein]]~~	+
-	~~[[Category: Molybdenum binding]]~~	+
-	~~[[Category: Molybdenum storage]]~~	+
-	~~[[Category: Rossmann fold~~]]	+

OCA at 12:10, 17 July 2019

2019-07-17T12:10:25Z

←Older revision		Revision as of 12:10, 17 July 2019
Line 1:		Line 1:

	==Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity==		==Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity==
-	<StructureSection load='4ndq' size='340' side='right' caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>	+	<StructureSection load='4ndq' size='340' side='right'caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>
Line 24:		Line 24:
	</StructureSection>		</StructureSection>
	[[Category: Azotobacter vinelandii]]		[[Category: Azotobacter vinelandii]]
		+	[[Category: Large Structures]]
	[[Category: Demmer, U]]		[[Category: Demmer, U]]
	[[Category: Ermler, U]]		[[Category: Ermler, U]]

OCA at 10:52, 4 August 2016

2016-08-04T10:52:54Z

←Older revision		Revision as of 10:52, 4 August 2016
Line 1:		Line 1:
		+
	==Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity==		==Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity==
	<StructureSection load='4ndq' size='340' side='right' caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='4ndq' size='340' side='right' caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://pdbe.org/4ndq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ndq ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 17:		Line 18:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4ndq" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 13:31, 24 December 2014

2014-12-24T13:31:06Z

←Older revision		Revision as of 13:31, 24 December 2014
Line 7:		Line 7:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/MOSB_AZOVD MOSB_AZOVD]] Intracellular storage of molybdenum. Binds polyoxomolybdates. Can bind at least 90 molybdenum atoms per protein molecule. [[http://www.uniprot.org/uniprot/MOSA_AZOVD MOSA_AZOVD]] Intracellular storage of molybdenum. Binds polyoxomolybdates. Can bind at least 90 molybdenum atoms per protein molecule.
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 07:42, 12 November 2014

2014-11-12T07:42:07Z

←Older revision		Revision as of 07:42, 12 November 2014
Line 20:		Line 20:
	</StructureSection>		</StructureSection>
	[[Category: Azotobacter vinelandii]]		[[Category: Azotobacter vinelandii]]
-	[[Category: Demmer, U.]]	+	[[Category: Demmer, U]]
-	[[Category: Ermler, U.]]	+	[[Category: Ermler, U]]
-	[[Category: Poppe, J.]]	+	[[Category: Poppe, J]]
-	[[Category: Warkentin, E.]]	+	[[Category: Warkentin, E]]
	[[Category: Atp binding]]		[[Category: Atp binding]]
	[[Category: Metal binding protein]]		[[Category: Metal binding protein]]

OCA at 14:26, 3 November 2014

2014-11-03T14:26:10Z

←Older revision		Revision as of 14:26, 3 November 2014
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]</td></tr>	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>
-	<table>	+	</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 28:		Line 28:
	[[Category: Molybdenum binding]]		[[Category: Molybdenum binding]]
	[[Category: Molybdenum storage]]		[[Category: Molybdenum storage]]
-	[[Category: ~~Rossman~~ fold]]	+	[[Category: Rossmann fold]]

OCA at 09:08, 13 August 2014

2014-08-13T09:08:16Z

←Older revision		Revision as of 09:08, 13 August 2014
Line 1:		Line 1:
-	'''~~Unreleased~~ structure'''	+	==Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity==
		+	<StructureSection load='4ndq' size='340' side='right' caption='[[4ndq]], [[Resolution\|resolution]] 1.75Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4ndq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NDQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NDQ FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8M0:BIS(MU4-OXO)-TETRAKIS(MU3-OXO)-HEXAKIS(MU2-OXO)-HEXADECAOXO-OCTAMOLYBDENUM+(VI)'>8M0</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=M10:(MU3-OXO)-TRIS(MU2-OXO)-NONAKISOXO-TRIMOLYBDENUM+(VI)'>M10</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MO:MOLYBDENUM+ATOM'>MO</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[2ogx\|2ogx]], [[4f6t\|4f6t]], [[4ndo\|4ndo]], [[4ndp\|4ndp]], [[4ndr\|4ndr]]</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ndq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ndq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ndq RCSB], [http://www.ebi.ac.uk/pdbsum/4ndq PDBsum]</span></td></tr>
		+	<table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The molybdenum storage protein (MoSto) can store more than 100 Mo or W atoms as discrete polyoxometalate (POM) clusters. Here, we describe the three POM cluster sites along the threefold axis of the protein complex based on four X-ray structures with slightly different polyoxomolybdate compositions between 1.35 and 2A resolution. In contrast to the Moalpha-out binding site occupied by an Mo3 cluster, the Moalpha-in and Mobeta binding sites contain rather weak and non-uniform electron density for the Mo atoms (but clearly identifiable by anomalous data), suggesting the presence of POM cluster ensembles and/or degradation products of larger aggregates. The "Moalpha-in cluster ensemble" was interpreted as an antiprism-like Mo6 species superimposed with an Mo7 pyramide and the "Mobeta cluster ensemble" as an Mo13 cluster (present mostly in a degraded form) composed of a pyramidal Mo7 and a Mo3 building block linked by three spatially separated MoOx units. Inside the ball-shaped Mo13 cluster sits an occluded central atom, perhaps a metal ion. POM cluster formation at the Moalpha-in and Mobeta sites appears to be driven by filtering out and binding/protecting self-assembled transient species complementary to the protein template.

-	~~The entry 4ndq is ON HOLD~~	+	Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.,Poppe J, Warkentin E, Demmer U, Kowalewski B, Dierks T, Schneider K, Ermler U J Inorg Biochem. 2014 Sep;138:122-8. doi: 10.1016/j.jinorgbio.2014.05.009. Epub, 2014 May 28. PMID:24945101<ref>PMID:24945101</ref>

-	~~Authors: Poppe~~, J.~~, Warkentin, E~~., Demmer, U., Ermler, U.	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~Description~~: ~~Crystal structure~~ Molybdenum ~~Storage Protein with fully Mo-loaded cavity~~	+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Azotobacter vinelandii]]
		+	[[Category: Demmer, U.]]
		+	[[Category: Ermler, U.]]
		+	[[Category: Poppe, J.]]
		+	[[Category: Warkentin, E.]]
		+	[[Category: Atp binding]]
		+	[[Category: Metal binding protein]]
		+	[[Category: Molybdenum binding]]
		+	[[Category: Molybdenum storage]]
		+	[[Category: Rossman fold]]

OCA at 06:48, 30 July 2014

2014-07-30T06:48:54Z

←Older revision		Revision as of 06:48, 30 July 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ndq is ON HOLD ~~until sometime in the future~~	+	The entry 4ndq is ON HOLD

	Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.		Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.

	Description: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity		Description: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity

OCA at 09:22, 25 December 2013

2013-12-25T09:22:47Z

←Older revision		Revision as of 09:22, 25 December 2013
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4ndq is ON HOLD	+	The entry 4ndq is ON HOLD until sometime in the future

	Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.		Authors: Poppe, J., Warkentin, E., Demmer, U., Ermler, U.

	Description: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity		Description: Crystal structure Molybdenum Storage Protein with fully Mo-loaded cavity