4np6 - Revision history

OCA at 08:39, 11 January 2023

2023-01-11T08:39:37Z

←Older revision		Revision as of 08:39, 11 January 2023
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	==Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor==		==Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor==
-	<StructureSection load='4np6' size='340' side='right' caption='[[4np6]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='4np6' size='340' side='right'caption='[[4np6]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4np6]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Vibch Vibch~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP6 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4NP6 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4np6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4NP6 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">adk, VC_0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [https://pdbe.org/4np6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [https://www.ebi.ac.uk/pdbsum/4np6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4np6 ProSAT]</span></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [~~http~~://pdbe.org/4np6 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4np6 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4np6 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).	+	[https://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
		+
		+	==See Also==
		+	*[[Adenylate kinase 3D structures\|Adenylate kinase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Adenylate kinase~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Vibch~~]]	+	[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
-	[[Category: Anderson~~, W F]]~~	+	[[Category: Anderson WF]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Grimshaw S]]
-	[[Category: Grimshaw, S]]	+	[[Category: Joachimiak A]]
-	[[Category: Joachimiak, A]]	+	[[Category: Kim Y]]
-	[[Category: Kim, Y]]	+	[[Category: Zhou M]]
-	[[Category: Zhou, M]]	+
-	~~[[Category: Alpha-beta fold]]~~	+
-	~~[[Category: Alpha-beta-alpha sandwich]]~~	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: National institute of allergy and infectious disease]]~~	+
-	~~[[Category: Niaid]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 08:16, 22 November 2017

2017-11-22T08:16:16Z

←Older revision		Revision as of 08:16, 22 November 2017
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	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).		[[http://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).
-
-	==See Also==
-	*[[Adenylate kinase\|Adenylate kinase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:40, 4 August 2016

2016-08-04T16:40:45Z

←Older revision		Revision as of 16:40, 4 August 2016
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		+
	==Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor==		==Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor==
	<StructureSection load='4np6' size='340' side='right' caption='[[4np6]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='4np6' size='340' side='right' caption='[[4np6]], [[Resolution\|resolution]] 2.00Å' scene=''>
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	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">adk, VC_0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">adk, VC_0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [http://www.ebi.ac.uk/pdbsum/4np6 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [http://pdbe.org/4np6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [http://www.ebi.ac.uk/pdbsum/4np6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4np6 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 11:04, 25 December 2014

2014-12-25T11:04:08Z

←Older revision		Revision as of 11:04, 25 December 2014
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	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [http://www.ebi.ac.uk/pdbsum/4np6 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [http://www.ebi.ac.uk/pdbsum/4np6 PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).

	==See Also==		==See Also==

OCA at 18:50, 21 December 2014

2014-12-21T18:50:38Z

←Older revision		Revision as of 18:50, 21 December 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4np6\| PDB=4np6 \| SCENE= }}~~	+	==Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor==
-	===Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor===	+	<StructureSection load='4np6' size='340' side='right' caption='[[4np6]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4np6]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4NP6 FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">adk, VC_0986 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4np6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4np6 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4np6 RCSB], [http://www.ebi.ac.uk/pdbsum/4np6 PDBsum]</span></td></tr>
		+	</table>

-	==~~Function~~==	+	==See Also==
-	[[~~http://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH~~]] ~~Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).~~	+	*[[Adenylate kinase\|Adenylate kinase]]
-		+	__TOC__
-	~~==About this Structure==~~	+	</StructureSection>
-	~~[[4np6]] is a 4 chain structure. Full crystallographic information is available from [http:~~/~~/oca.weizmann.ac.il/oca-bin/ocashort?id=4NP6 OCA].~~	+
	[[Category: Adenylate kinase]]		[[Category: Adenylate kinase]]
-	[[Category: Anderson, W F.]]	+	[[Category: Vibch]]
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	[[Category: Anderson, W F]]
-	[[Category: Grimshaw, S.]]	+	[[Category: Structural genomic]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Grimshaw, S]]
-	[[Category: Kim, Y.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Zhou, M.]]	+	[[Category: Kim, Y]]
		+	[[Category: Zhou, M]]
	[[Category: Alpha-beta fold]]		[[Category: Alpha-beta fold]]
	[[Category: Alpha-beta-alpha sandwich]]		[[Category: Alpha-beta-alpha sandwich]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: National institute of allergy and infectious disease]]		[[Category: National institute of allergy and infectious disease]]
	[[Category: Niaid]]		[[Category: Niaid]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 10:43, 18 December 2013

2013-12-18T10:43:37Z

←Older revision		Revision as of 10:43, 18 December 2013
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-	~~'''Unreleased structure'''~~	+	{{STRUCTURE_4np6\| PDB=4np6 \| SCENE= }}
		+	===Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor===

-	~~The entry 4np6 is ON HOLD~~	+	==Function==
		+	[[http://www.uniprot.org/uniprot/KAD_VIBCH KAD_VIBCH]] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism (By similarity).

-	~~Authors~~: ~~Kim, Y~~.~~, Zhou, M~~.~~, Grimshaw, S~~., Anderson, W.F., Joachimiak, A., Center for ~~Structural Genomics~~ of ~~Infectious Diseases (CSGID)~~	+	==About this Structure==
-		+	[[4np6]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4NP6 OCA].
-	~~Description~~: ~~Crystal Structure~~ of ~~Adenylate Kinase from Vibrio cholerae O1 biovar eltor~~	+	[[Category: Adenylate kinase]]
		+	[[Category: Anderson, W F.]]
		+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
		+	[[Category: Grimshaw, S.]]
		+	[[Category: Joachimiak, A.]]
		+	[[Category: Kim, Y.]]
		+	[[Category: Zhou, M.]]
		+	[[Category: Alpha-beta fold]]
		+	[[Category: Alpha-beta-alpha sandwich]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: Niaid]]
		+	[[Category: Structural genomic]]
		+	[[Category: Transferase]]

OCA at 06:51, 4 December 2013

2013-12-04T06:51:18Z

←Older revision		Revision as of 06:51, 4 December 2013
Line 3:		Line 3:
	The entry 4np6 is ON HOLD		The entry 4np6 is ON HOLD

-	Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A.~~, CSGID~~, Center for Structural Genomics of Infectious Diseases (CSGID)	+	Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

	Description: Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor		Description: Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor

OCA: Protected "4np6" [edit=sysop:move=sysop]

2013-11-27T09:54:15Z

Protected "4np6" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:54, 27 November 2013

OCA: New page: '''Unreleased structure''' The entry 4np6 is ON HOLD Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious Diseas...

2013-11-27T09:54:14Z

New page: '''Unreleased structure''' The entry 4np6 is ON HOLD Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious Diseas...

New page

'''Unreleased structure'''

The entry 4np6 is ON HOLD

Authors: Kim, Y., Zhou, M., Grimshaw, S., Anderson, W.F., Joachimiak, A., CSGID, Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal Structure of Adenylate Kinase from Vibrio cholerae O1 biovar eltor