4ovd - Revision history

OCA at 07:47, 25 January 2023

2023-01-25T07:47:43Z

←Older revision		Revision as of 07:47, 25 January 2023
Line 1:		Line 1:

	==Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469==		==Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469==
-	<StructureSection load='4ovd' size='340' side='right' caption='[[4ovd]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='4ovd' size='340' side='right'caption='[[4ovd]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4ovd]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atopd Atopd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4OVD FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4ovd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lancefieldella_parvulum_DSM_20469 Lancefieldella parvulum DSM 20469]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4OVD FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene~~></td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [https://pdbe.org/4ovd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [https://www.ebi.ac.uk/pdbsum/4ovd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ovd ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>~~	+
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [~~http~~://pdbe.org/4ovd PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4ovd PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4ovd ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/C8W9X3_LANP1 C8W9X3_LANP1]
		+
		+	==See Also==
		+	*[[Glycosyltransferase 3D structures\|Glycosyltransferase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Atopd~~]]	+	[[Category: Lancefieldella parvulum DSM 20469]]
-	[[Category: ~~Peptidoglycan glycosyltransferase~~]]	+	[[Category: Large Structures]]
-	[[Category: Anderson~~, W F~~]]	+	[[Category: Anderson WF]]
-	[[Category: Babnigg, G]]	+	[[Category: Babnigg G]]
-	[[Category: Clancy, S]]	+	[[Category: Clancy S]]
-	[[Category: Filippova~~, E V~~]]	+	[[Category: Filippova EV]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kiryukhina, O]]	+	[[Category: Kiryukhina O]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Wawrzak Z]]
-	[[Category: Wawrzak, Z]]	+
-	~~[[Category: D-transpeptidase]]~~	+
-	~~[[Category: Mcsg]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 14:26, 15 November 2017

2017-11-15T14:26:45Z

←Older revision		Revision as of 14:26, 15 November 2017
Line 10:		Line 10:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://pdbe.org/4ovd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ovd ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://pdbe.org/4ovd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ovd ProSAT]</span></td></tr>
	</table>		</table>
-
-	==See Also==
-	*[[Glycosyltransferase\|Glycosyltransferase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 11:07, 11 August 2016

2016-08-11T11:07:42Z

←Older revision		Revision as of 11:07, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469==		==Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469==
	<StructureSection load='4ovd' size='340' side='right' caption='[[4ovd]], [[Resolution\|resolution]] 2.00Å' scene=''>		<StructureSection load='4ovd' size='340' side='right' caption='[[4ovd]], [[Resolution\|resolution]] 2.00Å' scene=''>
Line 7:		Line 8:
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://pdbe.org/4ovd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ovd ProSAT]</span></td></tr>
	</table>		</table>

OCA at 14:39, 5 January 2015

2015-01-05T14:39:38Z

←Older revision		Revision as of 14:39, 5 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4ovd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atopd Atopd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OVD FirstGlance]. <br>		<table><tr><td colspan='2'>[[4ovd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atopd Atopd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OVD FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>
-	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum]</span></td></tr>
-	<table>	+	</table>

	==See Also==		==See Also==
Line 16:		Line 16:
	[[Category: Atopd]]		[[Category: Atopd]]
	[[Category: Peptidoglycan glycosyltransferase]]		[[Category: Peptidoglycan glycosyltransferase]]
-	[[Category: Anderson, W F.]]	+	[[Category: Anderson, W F]]
-	[[Category: Babnigg, G.]]	+	[[Category: Babnigg, G]]
-	[[Category: Clancy, S.]]	+	[[Category: Clancy, S]]
-	[[Category: Filippova, E V.]]	+	[[Category: Filippova, E V]]
-	[[Category: Joachimiak, A.]]	+	[[Category: Joachimiak, A]]
-	[[Category: Kiryukhina, O.]]	+	[[Category: Kiryukhina, O]]
-	[[Category: ~~MCSG, Midwest Center for~~ Structural ~~Genomics.~~]]	+	[[Category: Structural genomic]]
-	[[Category: Wawrzak, Z.]]	+	[[Category: Wawrzak, Z]]
	[[Category: D-transpeptidase]]		[[Category: D-transpeptidase]]
	[[Category: Mcsg]]		[[Category: Mcsg]]
-	[[Category: Midwest center for structural genomic]]
	[[Category: Psi-biology]]		[[Category: Psi-biology]]
-	[[Category: Structural genomic]]
	[[Category: Transferase]]		[[Category: Transferase]]

OCA at 06:20, 13 August 2014

2014-08-13T06:20:11Z

←Older revision		Revision as of 06:20, 13 August 2014
Line 1:		Line 1:
-	~~{{STRUCTURE_4ovd\| PDB=4ovd \| SCENE= }}~~	+	==Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469==
-	===Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469===	+	<StructureSection load='4ovd' size='340' side='right' caption='[[4ovd]], [[Resolution\|resolution]] 2.00Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4ovd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atopd Atopd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4OVD FirstGlance]. <br>
		+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Apar_0480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=521095 ATOPD])</td></tr>
		+	<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidoglycan_glycosyltransferase Peptidoglycan glycosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.129 2.4.1.129] </span></td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ovd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ovd OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ovd RCSB], [http://www.ebi.ac.uk/pdbsum/4ovd PDBsum]</span></td></tr>
		+	<table>

-	==~~About this Structure~~==	+	==See Also==
-	[[~~4ovd~~]] ~~is a 1 chain structure. Full crystallographic information is available from~~ [~~http~~:~~//oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA~~].	+	*[[Glycosyltransferase\|Glycosyltransferase]]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Atopd]]
	[[Category: Peptidoglycan glycosyltransferase]]		[[Category: Peptidoglycan glycosyltransferase]]
	[[Category: Anderson, W F.]]		[[Category: Anderson, W F.]]
Line 9:		Line 20:
	[[Category: Clancy, S.]]		[[Category: Clancy, S.]]
	[[Category: Filippova, E V.]]		[[Category: Filippova, E V.]]
-	[[Category: Joachimiak, J.]]	+	[[Category: Joachimiak, A.]]
	[[Category: Kiryukhina, O.]]		[[Category: Kiryukhina, O.]]
	[[Category: MCSG, Midwest Center for Structural Genomics.]]		[[Category: MCSG, Midwest Center for Structural Genomics.]]

OCA: Protected "4ovd" [edit=sysop:move=sysop]

2014-03-12T13:16:53Z

Protected "4ovd" [edit=sysop:move=sysop]

←Older revision

Revision as of 13:16, 12 March 2014

OCA: New page: {{STRUCTURE_4ovd| PDB=4ovd | SCENE= }} ===Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469=== ==About this Structure== 4ovd is ...

2014-03-12T13:16:51Z

New page: {{STRUCTURE_4ovd| PDB=4ovd | SCENE= }} ===Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469=== ==About this Structure== 4ovd is ...

New page

{{STRUCTURE_4ovd| PDB=4ovd | SCENE= }}
===Crystal structure of a putative peptidoglycan glycosyltransferase from Atopobium parvulum DSM 20469===

==About this Structure==
[[4ovd]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4OVD OCA].
[[Category: Peptidoglycan glycosyltransferase]]
[[Category: Anderson, W F.]]
[[Category: Babnigg, G.]]
[[Category: Clancy, S.]]
[[Category: Filippova, E V.]]
[[Category: Joachimiak, J.]]
[[Category: Kiryukhina, O.]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Wawrzak, Z.]]
[[Category: D-transpeptidase]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Psi-biology]]
[[Category: Structural genomic]]
[[Category: Transferase]]