4p1l - Revision history

OCA at 00:39, 28 December 2023

2023-12-28T00:39:09Z

←Older revision		Revision as of 00:39, 28 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromohalobacter_salexigens_DSM_3043 Chromohalobacter salexigens DSM 3043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P1L FirstGlance]. <br>		<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromohalobacter_salexigens_DSM_3043 Chromohalobacter salexigens DSM 3043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P1L FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [https://pdbe.org/4p1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [https://www.ebi.ac.uk/pdbsum/4p1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p1l ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [https://pdbe.org/4p1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [https://www.ebi.ac.uk/pdbsum/4p1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p1l ProSAT]</span></td></tr>
	</table>		</table>

OCA at 12:37, 1 February 2023

2023-02-01T12:37:11Z

←Older revision		Revision as of 12:37, 1 February 2023
Line 3:		Line 3:
	<StructureSection load='4p1l' size='340' side='right'caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='4p1l' size='340' side='right'caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Chrsd Chrsd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4P1L FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chromohalobacter_salexigens_DSM_3043 Chromohalobacter salexigens DSM 3043]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4P1L FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=~~SO4~~:~~SULFATE+ION~~'>~~SO4~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [https://pdbe.org/4p1l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [https://www.ebi.ac.uk/pdbsum/4p1l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4p1l ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [~~http~~://pdbe.org/4p1l PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4p1l PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4p1l ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/DCTP_CHRSD DCTP_CHRSD] Solute-binding protein that binds D-glucuronate (in vitro) (PubMed:25540822). Probably part of a tripartite ATP-independent periplasmic (TRAP) transport system that mediates solute transport into the cytoplasm.<ref>PMID:25540822</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 18:		Line 18:
	</div>		</div>
	<div class="pdbe-citations 4p1l" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 4p1l" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[TRAP dicarboxylate transporter%2C DctP subunit\|TRAP dicarboxylate transporter%2C DctP subunit]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Chrsd~~]]	+	[[Category: Chromohalobacter salexigens DSM 3043]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Almo, S C~~]]	+	[[Category: Al Obaidi NF]]
-	[[Category: ~~Attonito, J D~~]]	+	[[Category: Almo SC]]
-	[[Category: ~~Chowdhury, S~~]]	+	[[Category: Attonito JD]]
-	[[Category: ~~EFI, Enzyme Function Initiative~~]]	+	[[Category: Chowdhury S]]
-	[[Category: Evans, B]]	+	[[Category: Evans B]]
-	[[Category: Gerlt~~, J A]]~~	+	[[Category: Gerlt JA]]
-	~~[[Category: Glenn, A Scott~~]]	+	[[Category: Hillerich B]]
-	[[Category: Hillerich, B]]	+	[[Category: Love J]]
-	[[Category: Love, J]]	+	[[Category: Scott Glenn A]]
-	[[Category: ~~Obaidi, N F.Al~~]]	+	[[Category: Seidel RD]]
-	[[Category: Seidel~~, R D~~]]	+	[[Category: Stead M]]
-	[[Category: Stead, M]]	+	[[Category: Vetting MW]]
-	[[Category: Vetting~~, M W~~]]	+	[[Category: Whalen KL]]
-	[[Category: Whalen~~, K L]]~~	+
-	~~[[Category: Efi]]~~	+
-	~~[[Category: Enzyme function initiative]]~~	+
-	~~[[Category: Structural genomic]]~~	+
-	~~[[Category: Transport protein]]~~	+
-	~~[[Category: Trap periplasmic solute binding family~~]]	+

OCA at 10:07, 25 December 2019

2019-12-25T10:07:29Z

←Older revision		Revision as of 10:07, 25 December 2019
Line 1:		Line 1:

	==Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213==		==Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213==
-	<StructureSection load='4p1l' size='340' side='right' caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>	+	<StructureSection load='4p1l' size='340' side='right'caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrsd Chrsd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P1L FirstGlance]. <br>		<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrsd Chrsd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P1L FirstGlance]. <br>
Line 23:		Line 23:
	</StructureSection>		</StructureSection>
	[[Category: Chrsd]]		[[Category: Chrsd]]
		+	[[Category: Large Structures]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Attonito, J D]]		[[Category: Attonito, J D]]

OCA at 14:43, 15 November 2017

2017-11-15T14:43:41Z

←Older revision		Revision as of 14:43, 15 November 2017
Line 40:		Line 40:
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
		+	[[Category: Transport protein]]
	[[Category: Trap periplasmic solute binding family]]		[[Category: Trap periplasmic solute binding family]]

OCA at 17:08, 4 January 2017

2017-01-04T17:08:05Z

←Older revision		Revision as of 17:08, 4 January 2017
Line 1:		Line 1:
		+
	==Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213==		==Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213==
	<StructureSection load='4p1l' size='340' side='right' caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>		<StructureSection load='4p1l' size='340' side='right' caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>
Line 6:		Line 7:
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://pdbe.org/4p1l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4p1l ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4p1l" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 08:05, 25 February 2015

2015-02-25T08:05:50Z

←Older revision		Revision as of 08:05, 25 February 2015
Line 8:		Line 8:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The rate at which genome sequencing data is accruing demands enhanced methods for functional annotation and metabolism discovery. Solute binding proteins (SBPs) facilitate the transport of the first reactant in a metabolic pathway, thereby constraining the regions of chemical space and the chemistries that must be considered for pathway reconstruction. We describe high-throughput protein production and differential scanning fluorimetry platforms, which enabled the screening of 158 SBPs against a 189 component library specifically tailored for this class of proteins. Like all screening efforts, this approach is limited by the practical constraints imposed by construction of the library, i.e., we can study only those metabolites that are known to exist and which can be made in sufficient quantities for experimentation. To move beyond these inherent limitations, we illustrate the promise of crystallographic- and mass spectrometric-based approaches for the unbiased use of entire metabolomes as screening libraries. Together, our approaches identified 40 new SBP ligands, generated experiment-based annotations for 2084 SBPs in 71 isofunctional clusters, and defined numerous metabolic pathways, including novel catabolic pathways for the utilization of ethanolamine as sole nitrogen source and the use of d-Ala-d-Ala as sole carbon source. These efforts begin to define an integrated strategy for realizing the full value of amassing genome sequence data.
		+
		+	Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.,Vetting MW, Al-Obaidi N, Zhao S, San Francisco B, Kim J, Wichelecki DJ, Bouvier JT, Solbiati JO, Vu H, Zhang X, Rodionov DA, Love JD, Hillerich BS, Seidel RD, Quinn RJ, Osterman AL, Cronan JE, Jacobson MP, Gerlt JA, Almo SC Biochemistry. 2015 Jan 27;54(3):909-31. doi: 10.1021/bi501388y. Epub 2015 Jan 16. PMID:25540822<ref>PMID:25540822</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 14:50, 5 January 2015

2015-01-05T14:50:36Z

←Older revision		Revision as of 14:50, 5 January 2015
Line 3:		Line 3:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrsd Chrsd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P1L FirstGlance]. <br>		<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrsd Chrsd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P1L FirstGlance]. <br>
-	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])</td></tr>
-	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>
-	<table>	+	</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Chrsd]]		[[Category: Chrsd]]
-	[[Category: Almo, S C.]]	+	[[Category: Almo, S C]]
-	[[Category: Attonito, J D.]]	+	[[Category: Attonito, J D]]
-	[[Category: Chowdhury, S.]]	+	[[Category: Chowdhury, S]]
-	[[Category: EFI, Enzyme Function Initiative.]]	+	[[Category: EFI, Enzyme Function Initiative]]
-	[[Category: Evans, B.]]	+	[[Category: Evans, B]]
-	[[Category: Gerlt, J A.]]	+	[[Category: Gerlt, J A]]
-	[[Category: Glenn, A Scott.]]	+	[[Category: Glenn, A Scott]]
-	[[Category: Hillerich, B.]]	+	[[Category: Hillerich, B]]
-	[[Category: Love, J.]]	+	[[Category: Love, J]]
-	[[Category: Obaidi, N F.Al.]]	+	[[Category: Obaidi, N F.Al]]
-	[[Category: Seidel, R D.]]	+	[[Category: Seidel, R D]]
-	[[Category: Stead, M.]]	+	[[Category: Stead, M]]
-	[[Category: Vetting, M W.]]	+	[[Category: Vetting, M W]]
-	[[Category: Whalen, K L.]]	+	[[Category: Whalen, K L]]
	[[Category: Efi]]		[[Category: Efi]]
	[[Category: Enzyme function initiative]]		[[Category: Enzyme function initiative]]
	[[Category: Structural genomic]]		[[Category: Structural genomic]]
	[[Category: Trap periplasmic solute binding family]]		[[Category: Trap periplasmic solute binding family]]

OCA at 02:57, 7 August 2014

2014-08-07T02:57:53Z

←Older revision		Revision as of 02:57, 7 August 2014
Line 22:		Line 22:
	[[Category: Obaidi, N F.Al.]]		[[Category: Obaidi, N F.Al.]]
	[[Category: Seidel, R D.]]		[[Category: Seidel, R D.]]
-	[[Category: Stead, M]]	+	[[Category: Stead, M.]]
	[[Category: Vetting, M W.]]		[[Category: Vetting, M W.]]
	[[Category: Whalen, K L.]]		[[Category: Whalen, K L.]]

OCA at 06:52, 11 June 2014

2014-06-11T06:52:40Z

←Older revision		Revision as of 06:52, 11 June 2014
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-	~~{{STRUCTURE_4p1l\| PDB=4p1l \| SCENE= }}~~	+	==Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213==
-	===Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213===	+	<StructureSection load='4p1l' size='340' side='right' caption='[[4p1l]], [[Resolution\|resolution]] 1.70Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4p1l]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrsd Chrsd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4P1L FirstGlance]. <br>
-	[[4p1l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA].	+	</td></tr><tr><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
		+	<tr><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Csal_2479 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290398 CHRSD])</td></tr>
		+	<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4p1l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4p1l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4p1l RCSB], [http://www.ebi.ac.uk/pdbsum/4p1l PDBsum]</span></td></tr>
		+	<table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Chrsd]]
	[[Category: Almo, S C.]]		[[Category: Almo, S C.]]
	[[Category: Attonito, J D.]]		[[Category: Attonito, J D.]]

OCA at 09:44, 19 March 2014

2014-03-19T09:44:37Z

←Older revision		Revision as of 09:44, 19 March 2014
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-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4p1l\| PDB=4p1l \| SCENE= }}
		+	===Crystal structure of a trap periplasmic solute binding protein from chromohalobacter salexigens dsm 3043 (csal_2479), target EFI-510085, with bound d-glucuronate, spg i213===

-	~~The entry~~ 4p1l is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4p1l]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4P1L OCA].
-	~~Authors~~: ~~Vetting, M~~.W.~~, Al Obaidi, N~~.F., ~~Stead, M,~~ Attonito, J.D.~~, Scott Glenn, A.,~~ Chowdhury, S., Evans, B., Hillerich, B., Love, J., Seidel, R.D., Whalen, K.L.~~, Gerlt, J.A., Almo, S.C.,~~ Enzyme ~~Function Initiative (EFI)~~	+	[[Category: Almo, S C.]]
-		+	[[Category: Attonito, J D.]]
-	~~Description~~: ~~CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CHROMOHALOBACTER SALEXIGENS DSM 3043 (Csal_2479), TARGET EFI-510085, WITH BOUND D-GLUCURONATE~~	+	[[Category: Chowdhury, S.]]
		+	[[Category: EFI, Enzyme Function Initiative.]]
		+	[[Category: Evans, B.]]
		+	[[Category: Gerlt, J A.]]
		+	[[Category: Glenn, A Scott.]]
		+	[[Category: Hillerich, B.]]
		+	[[Category: Love, J.]]
		+	[[Category: Obaidi, N F.Al.]]
		+	[[Category: Seidel, R D.]]
		+	[[Category: Stead, M]]
		+	[[Category: Vetting, M W.]]
		+	[[Category: Whalen, K L.]]
		+	[[Category: Efi]]
		+	[[Category: Enzyme function initiative]]
		+	[[Category: Structural genomic]]
		+	[[Category: Trap periplasmic solute binding family]]