4pwt - Revision history

OCA at 17:23, 20 September 2023

2023-09-20T17:23:50Z

←Older revision		Revision as of 17:23, 20 September 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4pwt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PWT FirstGlance]. <br>		<table><tr><td colspan='2'>[[4pwt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PWT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.752Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [https://pdbe.org/4pwt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [https://www.ebi.ac.uk/pdbsum/4pwt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pwt ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [https://pdbe.org/4pwt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [https://www.ebi.ac.uk/pdbsum/4pwt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pwt ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:35, 8 February 2023

2023-02-08T07:35:32Z

←Older revision		Revision as of 07:35, 8 February 2023
Line 1:		Line 1:

	==Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92==		==Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92==
-	<StructureSection load='4pwt' size='340' side='right' caption='[[4pwt]], [[Resolution\|resolution]] 1.75Å' scene=''>	+	<StructureSection load='4pwt' size='340' side='right'caption='[[4pwt]], [[Resolution\|resolution]] 1.75Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4pwt]] is a 3 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Yersinia_pestis_co92~~ Yersinia pestis ~~co92~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4PWT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4pwt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pestis_CO92 Yersinia pestis CO92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PWT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=~~POP~~:~~PYROPHOSPHATE+2-~~'>~~POP~~</scene>, <scene name='pdbligand=~~SO4~~:~~SULFATE~~+~~ION~~'>~~SO4~~</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=~~MSE~~:~~SELENOMETHIONINE~~'>~~MSE~~</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [https://pdbe.org/4pwt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [https://www.ebi.ac.uk/pdbsum/4pwt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pwt ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">excC, pal, y3054, YPO1125, YP_1031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [~~http~~://pdbe.org/4pwt PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4pwt PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4pwt ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A380PP88_YERPE A0A380PP88_YERPE] Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.[HAMAP-Rule:MF_02204]

	==See Also==		==See Also==
Line 14:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Yersinia pestis co92~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Anderson, W F~~]]	+	[[Category: Yersinia pestis CO92]]
-	[[Category: ~~Structural genomic~~]]	+	[[Category: Anderson WF]]
-	[[Category: Joachimiak, A]]	+	[[Category: Joachimiak A]]
-	[[Category: Kim, Y]]	+	[[Category: Kim Y]]
-	[[Category: Maltseva, N]]	+	[[Category: Maltseva N]]
-	[[Category: Osipiuk, J]]	+	[[Category: Osipiuk J]]
-	~~[[Category: Alpha-beta fold]]~~	+
-	~~[[Category: Csgid]]~~	+
-	~~[[Category: Membrane protein]]~~	+
-	~~[[Category: National institute of allergy and infectious disease]]~~	+
-	~~[[Category: Niaid]]~~	+
-	~~[[Category: Peptidoglycan-associated outer membrane lipoprotein~~]]	+

OCA at 08:50, 11 August 2016

2016-08-11T08:50:31Z

←Older revision		Revision as of 08:50, 11 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92==		==Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92==
	<StructureSection load='4pwt' size='340' side='right' caption='[[4pwt]], [[Resolution\|resolution]] 1.75Å' scene=''>		<StructureSection load='4pwt' size='340' side='right' caption='[[4pwt]], [[Resolution\|resolution]] 1.75Å' scene=''>
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	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">excC, pal, y3054, YPO1125, YP_1031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>		<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">excC, pal, y3054, YPO1125, YP_1031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [http://www.ebi.ac.uk/pdbsum/4pwt PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [http://pdbe.org/4pwt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [http://www.ebi.ac.uk/pdbsum/4pwt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pwt ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Pal\|Pal]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:46, 5 January 2015

2015-01-05T09:46:25Z

←Older revision		Revision as of 09:46, 5 January 2015
Line 1:		Line 1:
-	~~{{STRUCTURE_4pwt\| PDB=4pwt \| SCENE= }}~~	+	==Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92==
-	===Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92===	+	<StructureSection load='4pwt' size='340' side='right' caption='[[4pwt]], [[Resolution\|resolution]] 1.75Å' scene=''>
-		+	== Structural highlights ==
-	==~~About this Structure~~==	+	<table><tr><td colspan='2'>[[4pwt]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Yersinia_pestis_co92 Yersinia pestis co92]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PWT FirstGlance]. <br>
-	[[4pwt]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA].	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	[[Category: Anderson, W F.]]	+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	[[Category: ~~CSGID, Center for~~ Structural ~~Genomics of Infectious Diseases.~~]]	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">excC, pal, y3054, YPO1125, YP_1031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=214092 Yersinia pestis CO92])</td></tr>
-	[[Category: Joachimiak, A.]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pwt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pwt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4pwt RCSB], [http://www.ebi.ac.uk/pdbsum/4pwt PDBsum]</span></td></tr>
-	[[Category: Kim, Y.]]	+	</table>
-	[[Category: Maltseva, N.]]	+	__TOC__
-	[[Category: Osipiuk, J.]]	+	</StructureSection>
		+	[[Category: Yersinia pestis co92]]
		+	[[Category: Anderson, W F]]
		+	[[Category: Structural genomic]]
		+	[[Category: Joachimiak, A]]
		+	[[Category: Kim, Y]]
		+	[[Category: Maltseva, N]]
		+	[[Category: Osipiuk, J]]
	[[Category: Alpha-beta fold]]		[[Category: Alpha-beta fold]]
-	[[Category: Center for structural genomics of infectious disease]]
	[[Category: Csgid]]		[[Category: Csgid]]
	[[Category: Membrane protein]]		[[Category: Membrane protein]]
Line 17:		Line 23:
	[[Category: Niaid]]		[[Category: Niaid]]
	[[Category: Peptidoglycan-associated outer membrane lipoprotein]]		[[Category: Peptidoglycan-associated outer membrane lipoprotein]]
-	[[Category: Structural genomic]]

OCA at 06:48, 9 April 2014

2014-04-09T06:48:53Z

←Older revision		Revision as of 06:48, 9 April 2014
Line 1:		Line 1:
-	~~'''Unreleased~~ structure~~'''~~	+	{{STRUCTURE_4pwt\| PDB=4pwt \| SCENE= }}
		+	===Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92===

-	~~The entry~~ 4pwt is ~~ON HOLD~~	+	==About this Structure==
-		+	[[4pwt]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PWT OCA].
-	~~Authors~~: ~~Maltseva, N~~.~~, Kim, Y~~.~~, Osipiuk, J~~., Anderson, W.F., Joachimiak, A., Center for ~~Structural Genomics~~ of ~~Infectious Diseases (CSGID)~~	+	[[Category: Anderson, W F.]]
-		+	[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
-	~~Description~~: ~~Crystal structure~~ of ~~peptidoglycan~~-associated outer membrane lipoprotein ~~from Yersinia pestis CO92~~	+	[[Category: Joachimiak, A.]]
		+	[[Category: Kim, Y.]]
		+	[[Category: Maltseva, N.]]
		+	[[Category: Osipiuk, J.]]
		+	[[Category: Alpha-beta fold]]
		+	[[Category: Center for structural genomics of infectious disease]]
		+	[[Category: Csgid]]
		+	[[Category: Membrane protein]]
		+	[[Category: National institute of allergy and infectious disease]]
		+	[[Category: Niaid]]
		+	[[Category: Peptidoglycan-associated outer membrane lipoprotein]]
		+	[[Category: Structural genomic]]

OCA: Protected "4pwt" [edit=sysop:move=sysop]

2014-04-02T08:34:17Z

Protected "4pwt" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:34, 2 April 2014

OCA: New page: '''Unreleased structure''' The entry 4pwt is ON HOLD Authors: Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (...

2014-04-02T08:34:16Z

New page: '''Unreleased structure''' The entry 4pwt is ON HOLD Authors: Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (...

New page

'''Unreleased structure'''

The entry 4pwt is ON HOLD

Authors: Maltseva, N., Kim, Y., Osipiuk, J., Anderson, W.F., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

Description: Crystal structure of peptidoglycan-associated outer membrane lipoprotein from Yersinia pestis CO92