4rz2 - Revision history

OCA at 17:59, 20 September 2023

2023-09-20T17:59:26Z

←Older revision		Revision as of 17:59, 20 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans_NG80-2 Geobacillus thermodenitrificans NG80-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans_NG80-2 Geobacillus thermodenitrificans NG80-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [https://pdbe.org/4rz2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [https://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.8Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [https://pdbe.org/4rz2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [https://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 10:34, 15 March 2023

2023-03-15T10:34:48Z

←Older revision		Revision as of 10:34, 15 March 2023
Line 3:		Line 3:
	<StructureSection load='4rz2' size='340' side='right'caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='4rz2' size='340' side='right'caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Geotn Geotn~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_thermodenitrificans_NG80-2 Geobacillus thermodenitrificans NG80-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>
-	</td></tr>~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [https://pdbe.org/4rz2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [https://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GTNG_1094 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=420246 GEOTN])</td></tr>~~	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [~~http~~://pdbe.org/4rz2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A4IMB4_GEOTN A4IMB4_GEOTN]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 21:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Geotn~~]]	+	[[Category: Geobacillus thermodenitrificans NG80-2]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Bange, G]]	+	[[Category: Bange G]]
-	[[Category: Schuhmacher~~, J S]]~~	+	[[Category: Schuhmacher JS]]
-	~~[[Category: Cell division]]~~	+
-	~~[[Category: Flagellum]]~~	+
-	~~[[Category: P-loop]]~~	+
-	~~[[Category: Simibi]]~~	+
-	~~[[Category: Structural protein]]~~	+
-	~~[[Category: Walker some~~]]	+

OCA at 09:52, 1 May 2019

2019-05-01T09:52:35Z

←Older revision		Revision as of 09:52, 1 May 2019
Line 1:		Line 1:

	==Crystal structure of the MinD-like ATPase FlhG==		==Crystal structure of the MinD-like ATPase FlhG==
-	<StructureSection load='4rz2' size='340' side='right' caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>	+	<StructureSection load='4rz2' size='340' side='right'caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Geotn Geotn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GTNG_1094 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=420246 GEOTN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://pdbe.org/4rz2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://pdbe.org/4rz2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>
	</table>		</table>
Line 20:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Geotn]]
		+	[[Category: Large Structures]]
	[[Category: Bange, G]]		[[Category: Bange, G]]
	[[Category: Schuhmacher, J S]]		[[Category: Schuhmacher, J S]]

OCA at 18:44, 1 February 2017

2017-02-01T18:44:34Z

←Older revision		Revision as of 18:44, 1 February 2017
Line 1:		Line 1:
		+
	==Crystal structure of the MinD-like ATPase FlhG==		==Crystal structure of the MinD-like ATPase FlhG==
	<StructureSection load='4rz2' size='340' side='right' caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>		<StructureSection load='4rz2' size='340' side='right' caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://pdbe.org/4rz2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rz2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
Line 14:		Line 15:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4rz2" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 06:57, 22 April 2015

2015-04-22T06:57:26Z

←Older revision		Revision as of 06:57, 22 April 2015
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The number and location of flagella, bacterial organelles of locomotion, are species specific and appear in regular patterns that represent one of the earliest taxonomic criteria in microbiology. However, the mechanisms that reproducibly establish these patterns during each round of cell division are poorly understood. FlhG (previously YlxH) is a major determinant for a variety of flagellation patterns. Here, we show that FlhG is a structural homolog of the ATPase MinD, which serves in cell-division site determination. Like MinD, FlhG forms homodimers that are dependent on ATP and lipids. It interacts with a complex of the flagellar C-ring proteins FliM and FliY (also FliN) in the Gram-positive, peritrichous-flagellated Bacillus subtilis and the Gram-negative, polar-flagellated Shewanella putrefaciens. FlhG interacts with FliM/FliY in a nucleotide-independent manner and activates FliM/FliY to assemble with the C-ring protein FliG in vitro. FlhG-driven assembly of the FliM/FliY/FliG complex is strongly enhanced by ATP and lipids. The protein shows a highly dynamic subcellular distribution between cytoplasm and flagellar basal bodies, suggesting that FlhG effects flagellar location and number during assembly of the C-ring. We describe the molecular evolution of a MinD-like ATPase into a flagellation pattern effector and suggest that the underappreciated structural diversity of the C-ring proteins might contribute to the formation of different flagellation patterns.
		+
		+	MinD-like ATPase FlhG effects location and number of bacterial flagella during C-ring assembly.,Schuhmacher JS, Rossmann F, Dempwolff F, Knauer C, Altegoer F, Steinchen W, Dorrich AK, Klingl A, Stephan M, Linne U, Thormann KM, Bange G Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3092-7. doi:, 10.1073/pnas.1419388112. Epub 2015 Mar 2. PMID:25733861<ref>PMID:25733861</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 11:35, 4 March 2015

2015-03-04T11:35:36Z

←Older revision		Revision as of 11:35, 4 March 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of the MinD-like ATPase FlhG==
-		+	<StructureSection load='4rz2' size='340' side='right' caption='[[4rz2]], [[Resolution\|resolution]] 2.80Å' scene=''>
-	~~The entry~~ 4rz2 is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4rz2]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RZ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RZ2 FirstGlance]. <br>
-	~~Authors~~: ~~Schuhmacher, J~~.S.~~, Bange, G~~.	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4rz3\|4rz3]], [[3syn\|3syn]]</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rz2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rz2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4rz2 RCSB], [http://www.ebi.ac.uk/pdbsum/4rz2 PDBsum]</span></td></tr>
-	~~Description~~: ~~Crystal structure of the MinD~~-~~like ATPase FlhG~~	+	</table>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	__TOC__
		+	</StructureSection>
	[[Category: Bange, G]]		[[Category: Bange, G]]
-	[[Category: Schuhmacher, J.S]]	+	[[Category: Schuhmacher, J S]]
		+	[[Category: Cell division]]
		+	[[Category: Flagellum]]
		+	[[Category: P-loop]]
		+	[[Category: Simibi]]
		+	[[Category: Structural protein]]
		+	[[Category: Walker some]]

OCA at 10:28, 25 February 2015

2015-02-25T10:28:56Z

←Older revision		Revision as of 10:28, 25 February 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4rz2 is ON HOLD	+	The entry 4rz2 is ON HOLD until Paper Publication

	Authors: Schuhmacher, J.S., Bange, G.		Authors: Schuhmacher, J.S., Bange, G.

OCA at 17:39, 24 December 2014

2014-12-24T17:39:09Z

←Older revision		Revision as of 17:39, 24 December 2014
Line 6:		Line 6:

	Description: Crystal structure of the MinD-like ATPase FlhG		Description: Crystal structure of the MinD-like ATPase FlhG
		+	[[Category: Unreleased Structures]]
		+	[[Category: Bange, G]]
		+	[[Category: Schuhmacher, J.S]]

OCA: Protected "4rz2" [edit=sysop:move=sysop]

2014-12-24T09:33:35Z

Protected "4rz2" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:33, 24 December 2014

OCA: New page: '''Unreleased structure''' The entry 4rz2 is ON HOLD Authors: Schuhmacher, J.S., Bange, G. Description: Crystal structure of the MinD-like ATPase FlhG

2014-12-24T09:33:33Z

New page: '''Unreleased structure''' The entry 4rz2 is ON HOLD Authors: Schuhmacher, J.S., Bange, G. Description: Crystal structure of the MinD-like ATPase FlhG

New page

'''Unreleased structure'''

The entry 4rz2 is ON HOLD

Authors: Schuhmacher, J.S., Bange, G.

Description: Crystal structure of the MinD-like ATPase FlhG