4u2n - Revision history

OCA at 12:26, 20 December 2023

2023-12-20T12:26:25Z

←Older revision		Revision as of 12:26, 20 December 2023
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	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U2N FirstGlance]. <br>		<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U2N FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [https://pdbe.org/4u2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [https://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.3Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [https://pdbe.org/4u2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [https://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==

OCA at 07:58, 22 March 2023

2023-03-22T07:58:39Z

←Older revision		Revision as of 07:58, 22 March 2023
Line 3:		Line 3:
	<StructureSection load='4u2n' size='340' side='right'caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='4u2n' size='340' side='right'caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Human Human~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4U2N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U2N FirstGlance]. <br>
-	</td></tr>~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>~~	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [https://pdbe.org/4u2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [https://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NACC1, BTBD14B, NAC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [~~http~~://pdbe.org/4u2n PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/ZBT17_HUMAN ZBT17_HUMAN]] Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment (By similarity). Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation.<ref>PMID:9312026</ref> <ref>PMID:9308237</ref> <ref>PMID:19164764</ref>	+	[https://www.uniprot.org/uniprot/ZBT17_HUMAN ZBT17_HUMAN] Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment (By similarity). Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation.<ref>PMID:9312026</ref> <ref>PMID:9308237</ref> <ref>PMID:19164764</ref> [https://www.uniprot.org/uniprot/NACC1_HUMAN NACC1_HUMAN] Functions as a transcriptional repressor. Seems to function as a transcriptional corepressor in neuronal cells through recruitment of HDAC3 and HDAC4. Contributes to tumor progression, and tumor cell proliferation and survival. This may be mediated at least in part through repressing transcriptional activity of GADD45GIP1. Required for recruiting the proteasome from the nucleus to the cytoplasm and dendritic spines.<ref>PMID:17130457</ref> <ref>PMID:17804717</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 21:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Human~~]]	+	[[Category: Homo sapiens]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Stead~~, M A~~]]	+	[[Category: Stead MA]]
-	[[Category: Wright~~, S C]]~~	+	[[Category: Wright SC]]
-	~~[[Category: Btb domain]]~~	+
-	~~[[Category: Poz domain]]~~	+
-	~~[[Category: Transcription~~]]	+

OCA at 14:09, 10 May 2019

2019-05-10T14:09:30Z

←Older revision		Revision as of 14:09, 10 May 2019
Line 1:		Line 1:

	==Crystal structure of a complex of the Miz1- and Nac1 POZ domains.==		==Crystal structure of a complex of the Miz1- and Nac1 POZ domains.==
-	<StructureSection load='4u2n' size='340' side='right' caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>	+	<StructureSection load='4u2n' size='340' side='right'caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U2N FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U2N FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NACC1, BTBD14B, NAC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://pdbe.org/4u2n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://pdbe.org/4u2n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>
	</table>		</table>
Line 22:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Human]]
		+	[[Category: Large Structures]]
	[[Category: Stead, M A]]		[[Category: Stead, M A]]
	[[Category: Wright, S C]]		[[Category: Wright, S C]]

OCA at 19:50, 5 August 2016

2016-08-05T19:50:37Z

←Older revision		Revision as of 19:50, 5 August 2016
Line 1:		Line 1:
		+
	==Crystal structure of a complex of the Miz1- and Nac1 POZ domains.==		==Crystal structure of a complex of the Miz1- and Nac1 POZ domains.==
	<StructureSection load='4u2n' size='340' side='right' caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>		<StructureSection load='4u2n' size='340' side='right' caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U2N FirstGlance]. <br>		<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U2N FirstGlance]. <br>
	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>		</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://pdbe.org/4u2n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u2n ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4u2n" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 21:26, 25 December 2014

2014-12-25T21:26:47Z

←Older revision		Revision as of 21:26, 25 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/ZBT17_HUMAN ZBT17_HUMAN]] Plays a critical role in early lymphocyte development, where it is essential to prevent apoptosis in lymphoid precursors, allowing them to survive in response to IL7 and undergo proper lineage commitment (By similarity). Transcription factor that can function as an activator or repressor depending on its binding partners, and by targeting negative regulators of cell cycle progression. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Required for early embryonic development during gastrulation.<ref>PMID:9312026</ref> <ref>PMID:9308237</ref> <ref>PMID:19164764</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==

OCA at 09:11, 17 December 2014

2014-12-17T09:11:20Z

←Older revision		Revision as of 09:11, 17 December 2014
Line 6:		Line 6:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>
	</table>		</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The POZ domain is an evolutionarily conserved protein-protein interaction domain that is found in approximately 40 mammalian transcription factors. POZ domains mediate both homodimerization and the heteromeric interactions of different POZ-domain transcription factors with each other. Miz1 is a POZ-domain transcription factor that regulates cell-cycle arrest and DNA-damage responses. The activities of Miz1 are altered by its interaction with the POZ-domain transcriptional repressors BCL6 and NAC1, and these interactions have been implicated in tumourigenesis in B-cell lymphomas and in ovarian serous carcinomas that overexpress BCL6 and NAC1, respectively. A strategy for the purification of tethered POZ domains that form forced heterodimers is described, and crystal structures of the heterodimeric POZ domains of Miz1/BCL6 and of Miz1/NAC1 are reported. These structures will be relevant for the design of therapeutics that target POZ-domain interaction interfaces.
		+
		+	Structures of heterodimeric POZ domains of Miz1/BCL6 and Miz1/NAC1.,Stead MA, Wright SC Acta Crystallogr F Struct Biol Commun. 2014 Dec 1;70(Pt 12):1591-6. doi:, 10.1107/S2053230X14023449. Epub 2014 Nov 14. PMID:25484205<ref>PMID:25484205</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
		+	== References ==
		+	<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 16:28, 10 December 2014

2014-12-10T16:28:31Z

←Older revision		Revision as of 16:28, 10 December 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of a complex of the Miz1- and Nac1 POZ domains.==
-		+	<StructureSection load='4u2n' size='340' side='right' caption='[[4u2n]], [[Resolution\|resolution]] 2.30Å' scene=''>
-	~~The entry~~ 4u2n is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4u2n]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U2N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U2N FirstGlance]. <br>
-	~~Authors~~: ~~Stead~~, M.A., Wright, S.C.	+	</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4u2m\|4u2m]]</td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u2n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u2n RCSB], [http://www.ebi.ac.uk/pdbsum/4u2n PDBsum]</span></td></tr>
-	~~Description~~: ~~Crystal structure of a complex of the Miz1-and Nac1 POZ domains.~~	+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Stead, M A]]
		+	[[Category: Wright, S C]]
		+	[[Category: Btb domain]]
		+	[[Category: Poz domain]]
		+	[[Category: Transcription]]

OCA at 07:15, 30 July 2014

2014-07-30T07:15:01Z

←Older revision		Revision as of 07:15, 30 July 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4u2n is ON HOLD	+	The entry 4u2n is ON HOLD until Paper Publication

	Authors: Stead, M.A., Wright, S.C.		Authors: Stead, M.A., Wright, S.C.

	Description: Crystal structure of a complex of the Miz1-and Nac1 POZ domains.		Description: Crystal structure of a complex of the Miz1-and Nac1 POZ domains.

OCA: Protected "4u2n" [edit=sysop:move=sysop]

2014-07-23T07:27:00Z

Protected "4u2n" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:27, 23 July 2014

OCA: New page: '''Unreleased structure''' The entry 4u2n is ON HOLD Authors: Stead, M.A., Wright, S.C. Description: Crystal structure of a complex of the Miz1-and Nac1 POZ domains.

2014-07-23T07:26:59Z

New page: '''Unreleased structure''' The entry 4u2n is ON HOLD Authors: Stead, M.A., Wright, S.C. Description: Crystal structure of a complex of the Miz1-and Nac1 POZ domains.

New page

'''Unreleased structure'''

The entry 4u2n is ON HOLD

Authors: Stead, M.A., Wright, S.C.

Description: Crystal structure of a complex of the Miz1-and Nac1 POZ domains.