4u63 - Revision history

OCA at 12:27, 20 December 2023

2023-12-20T12:27:09Z

←Older revision		Revision as of 12:27, 20 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U63 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.67Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [https://pdbe.org/4u63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [https://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [https://pdbe.org/4u63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [https://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:04, 22 March 2023

2023-03-22T08:04:43Z

←Older revision		Revision as of 08:04, 22 March 2023
Line 3:		Line 3:
	<StructureSection load='4u63' size='340' side='right'caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>		<StructureSection load='4u63' size='340' side='right'caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Agrfc Agrfc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4U63 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Atu1218 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [https://pdbe.org/4u63 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [https://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [~~http~~://pdbe.org/4u63 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/~~PHRA_AGRT5 PHRA_AGRT5]~~] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref>	+	[https://www.uniprot.org/uniprot/PHRA_AGRFC PHRA_AGRFC] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 23:		Line 22:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Agrfc~~]]	+	[[Category: Agrobacterium fabrum str. C58]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Kalms, J]]	+	[[Category: Kalms J]]
-	[[Category: Krauss, N]]	+	[[Category: Krauss N]]
-	[[Category: Lamparter, T]]	+	[[Category: Lamparter T]]
-	[[Category: Oberpichler, I]]	+	[[Category: Oberpichler I]]
-	[[Category: Scheerer, P]]	+	[[Category: Scheerer P]]
-	~~[[Category: Stetten, D von~~]]	+	[[Category: Zhang F]]
-	[[Category: Zhang, F]]	+	[[Category: Von Stetten D]]
-	[[Category: ~~Agrobacterium tumefacien]]~~	+
-	~~[[Category: Cyclopyrimidine dimer]]~~	+
-	~~[[Category: Dna]]~~	+
-	~~[[Category: Dna damage]]~~	+
-	~~[[Category: Dna repair]]~~	+
-	~~[[Category: Double-stranded]]~~	+
-	~~[[Category: Fad]]~~	+
-	~~[[Category: Flavin]]~~	+
-	~~[[Category: Flavoprotein]]~~	+
-	~~[[Category: Lyase]]~~	+
-	~~[[Category: Methenyltetrahydrofolate]]~~	+
-	~~[[Category: Photolyase]]~~	+
-	~~[[Category: Photoreduction]]~~	+
-	~~[[Category: Trp triade]]~~	+
-	~~[[Category: Ultraviolet ray~~]]	+

OCA at 14:25, 10 May 2019

2019-05-10T14:25:13Z

←Older revision		Revision as of 14:25, 10 May 2019
Line 1:		Line 1:

	==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==		==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==
-	<StructureSection load='4u63' size='340' side='right' caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>	+	<StructureSection load='4u63' size='340' side='right'caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrfc Agrfc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Atu1218 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 AGRFC])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://pdbe.org/4u63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://pdbe.org/4u63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>
	</table>		</table>
Line 22:		Line 23:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Agrfc]]
		+	[[Category: Large Structures]]
	[[Category: Kalms, J]]		[[Category: Kalms, J]]
	[[Category: Krauss, N]]		[[Category: Krauss, N]]

OCA at 01:56, 10 March 2017

2017-03-10T01:56:43Z

←Older revision		Revision as of 01:56, 10 March 2017
Line 1:		Line 1:
		+
	==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==		==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==
	<StructureSection load='4u63' size='340' side='right' caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>		<StructureSection load='4u63' size='340' side='right' caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>
Line 4:		Line 5:
	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://pdbe.org/4u63 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4u63 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
Line 16:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4u63" style="background-color:#fffaf0;"></div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 07:08, 1 April 2015

2015-04-01T07:08:47Z

←Older revision		Revision as of 07:08, 1 April 2015
Line 8:		Line 8:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/PHRA_AGRT5 PHRA_AGRT5]] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref>		[[http://www.uniprot.org/uniprot/PHRA_AGRT5 PHRA_AGRT5]] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	Photolyases are proteins with an FAD chromophore that repair UV-induced pyrimidine dimers on the DNA in a light dependent manner. The cyclobutane pyrimidine dimer (CPD) class III photolyases are structurally unknown but closely related to plant cryptochromes, which serve as blue-light photoreceptors. Here we present the crystal structure of a class III photolyase termed photolyase related protein A (PhrA) of Agrobacterium tumefaciens at resolution of 1.67 Angstrom. PhrA contains 5,10-methenyltetrahydrofolate (MTHF) as an antenna chromophore with a unique binding site and - mode. Two Trp residues play pivotal roles for stabilizing MTHF by a double pi-stacking sandwich. Plant cryptochrome I forms a pocket at the same site that could accommodate MTHF or a similar molecule. The PhrA structure and mutant studies showed that electrons flow during FAD photoreduction proceeds via two Trp-triads. The structural studies on PhrA give a clearer picture on the evolutionary transition from photolyase to photoreceptor.
		+
		+	The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways.,Scheerer P, Zhang F, Kalms J, von Stetten D, Krauss N, Oberpichler I, Lamparter T J Biol Chem. 2015 Mar 17. pii: jbc.M115.637868. PMID:25784552<ref>PMID:25784552</ref>
		+
		+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
		+	</div>
	== References ==		== References ==
	<references/>		<references/>

OCA at 14:11, 26 March 2015

2015-03-26T14:11:11Z

←Older revision		Revision as of 14:11, 26 March 2015
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==
-		+	<StructureSection load='4u63' size='340' side='right' caption='[[4u63]], [[Resolution\|resolution]] 1.67Å' scene=''>
-	~~The entry~~ 4u63 is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
-	~~Authors~~: ~~Scheerer~~, P., ~~Zhang~~, F., ~~Kalms~~, J., ~~von Stetten~~, D., ~~Krauss, N~~., ~~Oberpichler, I~~., ~~Lamparter, T~~.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum]</span></td></tr>
-	~~Description~~: ~~Crystal structure~~ of ~~a bacterial class III photolyase from Agrobacterium tumefaciens at 1~~.~~67A resolution~~	+	</table>
-	[[Category: ~~Unreleased Structures~~]]	+	== Function ==
		+	[[http://www.uniprot.org/uniprot/PHRA_AGRT5 PHRA_AGRT5]] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Kalms, J]]
	[[Category: Krauss, N]]		[[Category: Krauss, N]]
-	[[Category: ~~Von Stetten~~, D]]	+	[[Category: Lamparter, T]]
	[[Category: Oberpichler, I]]		[[Category: Oberpichler, I]]
	[[Category: Scheerer, P]]		[[Category: Scheerer, P]]
		+	[[Category: Stetten, D von]]
	[[Category: Zhang, F]]		[[Category: Zhang, F]]
-	[[Category: ~~Lamparter, T~~]]	+	[[Category: Agrobacterium tumefacien]]
-	[[Category: ~~Kalms, J~~]]	+	[[Category: Cyclopyrimidine dimer]]
		+	[[Category: Dna]]
		+	[[Category: Dna damage]]
		+	[[Category: Dna repair]]
		+	[[Category: Double-stranded]]
		+	[[Category: Fad]]
		+	[[Category: Flavin]]
		+	[[Category: Flavoprotein]]
		+	[[Category: Lyase]]
		+	[[Category: Methenyltetrahydrofolate]]
		+	[[Category: Photolyase]]
		+	[[Category: Photoreduction]]
		+	[[Category: Trp triade]]
		+	[[Category: Ultraviolet ray]]

OCA at 18:10, 24 December 2014

2014-12-24T18:10:26Z

←Older revision		Revision as of 18:10, 24 December 2014
Line 6:		Line 6:

	Description: Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution		Description: Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution
		+	[[Category: Unreleased Structures]]
		+	[[Category: Krauss, N]]
		+	[[Category: Von Stetten, D]]
		+	[[Category: Oberpichler, I]]
		+	[[Category: Scheerer, P]]
		+	[[Category: Zhang, F]]
		+	[[Category: Lamparter, T]]
		+	[[Category: Kalms, J]]

OCA: Protected "4u63" [edit=sysop:move=sysop]

2014-08-07T01:31:34Z

Protected "4u63" [edit=sysop:move=sysop]

←Older revision

Revision as of 01:31, 7 August 2014

OCA: New page: '''Unreleased structure''' The entry 4u63 is ON HOLD until Paper Publication Authors: Scheerer, P., Zhang, F., Kalms, J., von Stetten, D., Krauss, N., Oberpichler, I., Lamparter, T. De...

2014-08-07T01:31:33Z

New page: '''Unreleased structure''' The entry 4u63 is ON HOLD until Paper Publication Authors: Scheerer, P., Zhang, F., Kalms, J., von Stetten, D., Krauss, N., Oberpichler, I., Lamparter, T. De...

New page

'''Unreleased structure'''

The entry 4u63 is ON HOLD until Paper Publication

Authors: Scheerer, P., Zhang, F., Kalms, J., von Stetten, D., Krauss, N., Oberpichler, I., Lamparter, T.

Description: Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution