4wsx - Revision history

OCA at 00:55, 28 December 2023

2023-12-28T00:55:21Z

←Older revision		Revision as of 00:55, 28 December 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WSX FirstGlance]. <br>		<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WSX FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.7Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [https://pdbe.org/4wsx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [https://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [https://pdbe.org/4wsx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [https://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>
	</table>		</table>

OCA at 07:24, 7 April 2023

2023-04-07T07:24:41Z

←Older revision		Revision as of 07:24, 7 April 2023
Line 3:		Line 3:
	<StructureSection load='4wsx' size='340' side='right'caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='4wsx' size='340' side='right'caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~9infa 9infa~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4WSX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4WSX FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [https://pdbe.org/4wsx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [https://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [~~http~~://pdbe.org/4wsx PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A0A0J9X252_9INFA A0A0J9X252_9INFA]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 19:		Line 20:

	==See Also==		==See Also==
-	*[[Hemagglutinin\|Hemagglutinin]]	+	*[[Hemagglutinin 3D structures\|Hemagglutinin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Influenza A virus]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Carney~~, P J~~]]	+	[[Category: Carney PJ]]
-	[[Category: Chang~~, J C~~]]	+	[[Category: Chang JC]]
-	[[Category: Stevens, J]]	+	[[Category: Stevens J]]
-	[[Category: Villanueva~~, J M~~]]	+	[[Category: Villanueva JM]]
-	[[Category: Yang, H]]	+	[[Category: Yang H]]
-	~~[[Category: H10]]~~	+
-	~~[[Category: Hemagglutinin]]~~	+
-	~~[[Category: Influenza virus]]~~	+
-	~~[[Category: Viral protein~~]]	+

OCA at 07:58, 23 May 2019

2019-05-23T07:58:07Z

←Older revision		Revision as of 07:58, 23 May 2019
Line 1:		Line 1:
-	~~{{Large structure}}~~	+
	==The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus==		==The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus==
-	<StructureSection load='4wsx' size='340' side='right' caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='4wsx' size='340' side='right'caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WSX FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure with sequence from [http://en.wikipedia.org/wiki/9infa 9infa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WSX FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [http://pdbe.org/4wsx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [http://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [http://pdbe.org/4wsx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [http://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>
	</table>		</table>
-	{{Large structure}}
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 25:		Line 24:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Carney, P J]]		[[Category: Carney, P J]]
	[[Category: Chang, J C]]		[[Category: Chang, J C]]

OCA at 00:13, 26 January 2017

2017-01-26T00:13:04Z

←Older revision		Revision as of 00:13, 26 January 2017
Line 1:		Line 1:
		+	{{Large structure}}
	==The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus==		==The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus==
	<StructureSection load='4wsx' size='340' side='right' caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='4wsx' size='340' side='right' caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [http://www.ebi.ac.uk/pdbsum/4wsx PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [http://pdbe.org/4wsx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [http://www.ebi.ac.uk/pdbsum/4wsx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4wsx ProSAT]</span></td></tr>
	</table>		</table>
		+	{{Large structure}}
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
Line 15:		Line 17:
	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>		From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
	</div>		</div>
		+	<div class="pdbe-citations 4wsx" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Hemagglutinin\|Hemagglutinin]]
	== References ==		== References ==
	<references/>		<references/>

OCA at 13:50, 25 February 2015

2015-02-25T13:50:28Z

←Older revision		Revision as of 13:50, 25 February 2015
Line 1:		Line 1:
-	'''~~Unreleased~~ structure'''	+	==The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus==
		+	<StructureSection load='4wsx' size='340' side='right' caption='[[4wsx]], [[Resolution\|resolution]] 2.70Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[4wsx]] is a 24 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4WSX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4WSX FirstGlance]. <br>
		+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[4wsr\|4wsr]], [[4wss\|4wss]], [[4wst\|4wst]], [[4wsu\|4wsu]], [[4wsv\|4wsv]], [[4wsw\|4wsw]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4wsx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4wsx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4wsx RCSB], [http://www.ebi.ac.uk/pdbsum/4wsx PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	During 2013, three new avian influenza A virus subtypes, A(H7N9), A(H6N1) and A(H10N8), resulted in human infections. While the A(H7N9) virus resulted in a significant epidemic in China across 19 provinces and municipalities, both A(H6N1) and A(H10N8) viruses resulted in only a few human infections. This study focuses on the major surface glycoprotein hemagglutinin from both of these novel human viruses. The detailed structural and glycan microarray analyses presented here highlight that both A(H6N1) and A(H10N8) virus hemagglutinins retain a strong avian receptor binding preference, and thus currently pose a low risk for sustained human infections. IMPORTANCE: Human infections with zoonotic influenza virus subtypes continue to be a great public health concern. We report detailed structural analysis and glycan microarray data for recombinant hemagglutinins from A(H6N1) and A(H10N8) viruses, isolated from human infections in 2013, and compare them with hemagglutinins of avian origin. This is the first structural report of an H6 HA, and our results should further the understanding of these viruses, and provide useful information to aid continuous surveillance of these zoonotic influenza viruses.

-	~~The entry 4wsx is ON HOLD~~	+	Structure and receptor binding preferences of recombinant hemagglutinins from avian and human H6 and H10 influenza A virus subtypes.,Yang H, Carney PJ, Chang JC, Villanueva JM, Stevens J J Virol. 2015 Feb 11. pii: JVI.03456-14. PMID:25673707<ref>PMID:25673707</ref>

-	~~Authors: Yang~~, H., Carney, P.J., Chang, J.C~~., Villanueva, J.M., Stevens, J.~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-		+	</div>
-	~~Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus~~	+	== References ==
-	[[Category: ~~Unreleased Structures~~]]	+	<references/>
-	[[Category: Villanueva, J.M]]	+	__TOC__
		+	</StructureSection>
		+	[[Category: Carney, P J]]
		+	[[Category: Chang, J C]]
		+	[[Category: Stevens, J]]
		+	[[Category: Villanueva, J M]]
	[[Category: Yang, H]]		[[Category: Yang, H]]
-	[[Category: ~~Carney, P.J~~]]	+	[[Category: H10]]
-	[[Category: ~~Stevens, J~~]]	+	[[Category: Hemagglutinin]]
-	[[Category: ~~Chang, J.C~~]]	+	[[Category: Influenza virus]]
		+	[[Category: Viral protein]]

OCA at 10:50, 18 February 2015

2015-02-18T10:50:27Z

←Older revision		Revision as of 10:50, 18 February 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4wsx is ON HOLD ~~until sometime in the future~~	+	The entry 4wsx is ON HOLD

	Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.		Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.

OCA at 19:56, 24 December 2014

2014-12-24T19:56:42Z

←Older revision		Revision as of 19:56, 24 December 2014
Line 6:		Line 6:

	Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus		Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus
		+	[[Category: Unreleased Structures]]
		+	[[Category: Villanueva, J.M]]
		+	[[Category: Yang, H]]
		+	[[Category: Carney, P.J]]
		+	[[Category: Stevens, J]]
		+	[[Category: Chang, J.C]]

OCA at 07:08, 26 November 2014

2014-11-26T07:08:22Z

←Older revision		Revision as of 07:08, 26 November 2014
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 4wsx is ON HOLD	+	The entry 4wsx is ON HOLD until sometime in the future

	Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.		Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.

	Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus		Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus

OCA: Protected "4wsx" [edit=sysop:move=sysop]

2014-11-05T08:08:02Z

Protected "4wsx" [edit=sysop:move=sysop]

←Older revision

Revision as of 08:08, 5 November 2014

OCA: New page: '''Unreleased structure''' The entry 4wsx is ON HOLD Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J. Description: The crystal structure of hemagglutinin fro...

2014-11-05T08:08:01Z

New page: '''Unreleased structure''' The entry 4wsx is ON HOLD Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J. Description: The crystal structure of hemagglutinin fro...

New page

'''Unreleased structure'''

The entry 4wsx is ON HOLD

Authors: Yang, H., Carney, P.J., Chang, J.C., Villanueva, J.M., Stevens, J.

Description: The crystal structure of hemagglutinin from A/Jiangxi-Donghu/346/2013 influenza virus