4x04 - Revision history

OCA at 07:39, 27 September 2023

2023-09-27T07:39:38Z

←Older revision		Revision as of 07:39, 27 September 2023
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_koseri_ATCC_BAA-895 Citrobacter koseri ATCC BAA-895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X04 FirstGlance]. <br>		<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_koseri_ATCC_BAA-895 Citrobacter koseri ATCC BAA-895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.5Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [https://pdbe.org/4x04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [https://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [https://pdbe.org/4x04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [https://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
	</table>		</table>

OCA at 21:05, 12 April 2023

2023-04-12T21:05:18Z

←Older revision		Revision as of 21:05, 12 April 2023
Line 1:		Line 1:

	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==		==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==
-	<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>	+	<StructureSection load='4x04' size='340' side='right'caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Citk8 Citk8~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4X04 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Citrobacter_koseri_ATCC_BAA-895 Citrobacter koseri ATCC BAA-895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat">~~<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>~~</td></tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [https://pdbe.org/4x04 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [https://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
-	~~<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CKO_04899 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290338 CITK8])~~</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [~~http~~://pdbe.org/4x04 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/A8AR30_CITK8 A8AR30_CITK8]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Citk8~~]]	+	[[Category: Citrobacter koseri ATCC BAA-895]]
-	[[Category: ~~Almo, S C~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Attonito, J D~~]]	+	[[Category: Al Obaidi NF]]
-	[[Category: ~~Benach, J~~]]	+	[[Category: Almo SC]]
-	[[Category: ~~Chamala, S~~]]	+	[[Category: Attonito JD]]
-	[[Category: ~~Chowdhury, S~~]]	+	[[Category: Benach J]]
-	[[Category: ~~EFI, Enzyme Function Initiative~~]]	+	[[Category: Chamala S]]
-	[[Category: ~~Gerlt, J A~~]]	+	[[Category: Chowdhury S]]
-	[[Category: ~~Glenn, A Scott~~]]	+	[[Category: Gerlt JA]]
-	[[Category: Lafleur, J]]	+	[[Category: Lafleur J]]
-	[[Category: Love, J]]	+	[[Category: Love J]]
-	[[Category: Morisco~~, L L~~]]	+	[[Category: Morisco LL]]
-	[[Category: ~~Obaidi, N F.Al~~]]	+	[[Category: Scott Glenn A]]
-	[[Category: Seidel~~, R D~~]]	+	[[Category: Seidel RD]]
-	[[Category: Toro, R]]	+	[[Category: Toro R]]
-	[[Category: Vetting~~, M W~~]]	+	[[Category: Vetting MW]]
-	[[Category: Wasserman~~, S R~~]]	+	[[Category: Wasserman SR]]
-	[[Category: Whalen~~, K L~~]]	+	[[Category: Whalen KL]]
-	[[Category: Yadava, U]]	+	[[Category: Yadava U]]
-	~~[[Category: Efi]]~~	+
-	~~[[Category: Enzyme function initiative]]~~	+
-	~~[[Category: Solute binding protein]]~~	+
-	~~[[Category: Structural genomic~~]]	+

OCA at 12:14, 6 November 2017

2017-11-06T12:14:32Z

←Older revision		Revision as of 12:14, 6 November 2017
Line 3:		Line 3:
	<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X04 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Citk8 Citk8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">CKO_04899 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=290338 CITK8])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://pdbe.org/4x04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://pdbe.org/4x04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Citk8]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]
	[[Category: Attonito, J D]]		[[Category: Attonito, J D]]

OCA at 00:11, 26 January 2017

2017-01-26T00:11:25Z

←Older revision		Revision as of 00:11, 26 January 2017
Line 1:		Line 1:
		+
	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==		==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==
	<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>		<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>
Line 5:		Line 6:
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://pdbe.org/4x04 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4x04 ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__

OCA at 16:30, 10 December 2014

2014-12-10T16:30:58Z

←Older revision		Revision as of 16:30, 10 December 2014
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate==
-		+	<StructureSection load='4x04' size='340' side='right' caption='[[4x04]], [[Resolution\|resolution]] 2.50Å' scene=''>
-	~~The entry~~ 4x04 is ~~ON HOLD~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4x04]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X04 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X04 FirstGlance]. <br>
-	~~Authors~~: ~~Yadava, U~~.~~, Vetting, M~~.W.~~, Al Obaidi, N~~.F., ~~Toro~~, R., ~~Morisco, L~~.L., ~~Benach, J~~., ~~Wasserman, S~~.R., Attonito, J.D~~., Scott Glenn, A.~~, Chamala, S., Chowdhury, S., ~~Lafleur~~, J., Love, J., Seidel, R.D., Whalen, K.L~~., Gerlt, J.A., Almo, S.C.~~, Enzyme ~~Function Initiative (EFI)~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-		+	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	~~Description~~: ~~CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x04 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x04 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4x04 RCSB], [http://www.ebi.ac.uk/pdbsum/4x04 PDBsum]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Almo, S C]]
		+	[[Category: Attonito, J D]]
		+	[[Category: Benach, J]]
		+	[[Category: Chamala, S]]
		+	[[Category: Chowdhury, S]]
		+	[[Category: EFI, Enzyme Function Initiative]]
		+	[[Category: Gerlt, J A]]
		+	[[Category: Glenn, A Scott]]
		+	[[Category: Lafleur, J]]
		+	[[Category: Love, J]]
		+	[[Category: Morisco, L L]]
		+	[[Category: Obaidi, N F.Al]]
		+	[[Category: Seidel, R D]]
		+	[[Category: Toro, R]]
		+	[[Category: Vetting, M W]]
		+	[[Category: Wasserman, S R]]
		+	[[Category: Whalen, K L]]
		+	[[Category: Yadava, U]]
		+	[[Category: Efi]]
		+	[[Category: Enzyme function initiative]]
		+	[[Category: Solute binding protein]]
		+	[[Category: Structural genomic]]

OCA: Protected "4x04" [edit=sysop:move=sysop]

2014-11-26T07:15:25Z

Protected "4x04" [edit=sysop:move=sysop]

←Older revision

Revision as of 07:15, 26 November 2014

OCA: New page: '''Unreleased structure''' The entry 4x04 is ON HOLD Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Gle...

2014-11-26T07:15:24Z

New page: '''Unreleased structure''' The entry 4x04 is ON HOLD Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Gle...

New page

'''Unreleased structure'''

The entry 4x04 is ON HOLD

Authors: Yadava, U., Vetting, M.W., Al Obaidi, N.F., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Scott Glenn, A., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

Description: CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM CITROBACTER KOSERI (CKO_04899, TARGET EFI-510094) WITH BOUND D-glucuronate