4yio - Revision history

OCA at 10:55, 10 January 2024

2024-01-10T10:55:28Z

←Older revision		Revision as of 10:55, 10 January 2024
Line 4:		Line 4:
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus Streptococcus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YIO FirstGlance]. <br>		<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus Streptococcus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YIO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.6Å</td></tr>
		+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [https://pdbe.org/4yio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [https://www.ebi.ac.uk/pdbsum/4yio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yio ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [https://pdbe.org/4yio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [https://www.ebi.ac.uk/pdbsum/4yio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yio ProSAT]</span></td></tr>
	</table>		</table>

OCA at 08:15, 3 May 2023

2023-05-03T08:15:23Z

←Older revision		Revision as of 08:15, 3 May 2023
Line 3:		Line 3:
	<StructureSection load='4yio' size='340' side='right'caption='[[4yio]], [[Resolution\|resolution]] 1.60Å' scene=''>		<StructureSection load='4yio' size='340' side='right'caption='[[4yio]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Atcc_19258 Atcc 19258~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4YIO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_thermophilus Streptococcus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4YIO FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene~~></td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [https://pdbe.org/4yio PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [https://www.ebi.ac.uk/pdbsum/4yio PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4yio ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [~~http~~://pdbe.org/4yio PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/4yio PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=4yio ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/Q5M4Z1_STRT2 Q5M4Z1_STRT2]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414]	+	[https://www.uniprot.org/uniprot/Q5M4Z1_STRT2 Q5M4Z1_STRT2] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414]

	==See Also==		==See Also==
-	*[[Superoxide ~~Dismutase~~\|Superoxide ~~Dismutase~~]]	+	*[[Superoxide dismutase 3D structures\|Superoxide dismutase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Atcc 19258]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Superoxide dismutase]]~~	+	[[Category: Streptococcus thermophilus]]
-	~~[[Category: Krauss, I Russo~~]]	+	[[Category: Merlino A]]
-	[[Category: Merlino, A]]	+	[[Category: Pica A]]
-	[[Category: Pica, A]]	+	[[Category: Russo Krauss I]]
-	[[Category: ~~Sica, F~~]]	+	[[Category: Sica F]]
-	[[Category: ~~Cambialistic]]~~	+
-	~~[[Category: Oxidoreductase]]~~	+
-	~~[[Category: Thermophilic~~]]	+

OCA at 07:21, 12 June 2019

2019-06-12T07:21:35Z

←Older revision		Revision as of 07:21, 12 June 2019
Line 1:		Line 1:
		+
	==X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus==		==X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus==
-	<StructureSection load='4yio' size='340' side='right' caption='[[4yio]], [[Resolution\|resolution]] 1.60Å' scene=''>	+	<StructureSection load='4yio' size='340' side='right'caption='[[4yio]], [[Resolution\|resolution]] 1.60Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YIO FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_19258 Atcc 19258]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YIO FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [http://pdbe.org/4yio PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [http://www.ebi.ac.uk/pdbsum/4yio PDBsum]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [http://pdbe.org/4yio PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [http://www.ebi.ac.uk/pdbsum/4yio PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4yio ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/Q5M4Z1_STRT2 Q5M4Z1_STRT2]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414]		[[http://www.uniprot.org/uniprot/Q5M4Z1_STRT2 Q5M4Z1_STRT2]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414]
		+
		+	==See Also==
		+	*[[Superoxide Dismutase\|Superoxide Dismutase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Atcc 19258]]
		+	[[Category: Large Structures]]
	[[Category: Superoxide dismutase]]		[[Category: Superoxide dismutase]]
	[[Category: Krauss, I Russo]]		[[Category: Krauss, I Russo]]

OCA at 20:24, 13 January 2016

2016-01-13T20:24:33Z

←Older revision		Revision as of 20:24, 13 January 2016
Line 1:		Line 1:
-	'''~~Unreleased structure~~'''	+	==X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus==
-		+	<StructureSection load='4yio' size='340' side='right' caption='[[4yio]], [[Resolution\|resolution]] 1.60Å' scene=''>
-	~~The entry~~ 4yio is ~~ON HOLD until Paper Publication~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[4yio]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4YIO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4YIO FirstGlance]. <br>
-	~~Authors~~: ~~Russo Krauss~~, I., ~~Merlino~~, A., ~~Pica, A~~., ~~Sica, F~~.	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
-	~~Description~~: ~~X-ray structure of~~ the ~~iron~~/~~manganese cambialistic superoxide~~ dismutase ~~from Streptococcus thermophilus~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4yio FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4yio OCA], [http://pdbe.org/4yio PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4yio RCSB], [http://www.ebi.ac.uk/pdbsum/4yio PDBsum]</span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/Q5M4Z1_STRT2 Q5M4Z1_STRT2]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.[RuleBase:RU000414]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Superoxide dismutase]]
		+	[[Category: Krauss, I Russo]]
	[[Category: Merlino, A]]		[[Category: Merlino, A]]
-	[[Category: Russo Krauss, I]]
	[[Category: Pica, A]]		[[Category: Pica, A]]
	[[Category: Sica, F]]		[[Category: Sica, F]]
		+	[[Category: Cambialistic]]
		+	[[Category: Oxidoreductase]]
		+	[[Category: Thermophilic]]

OCA at 23:36, 30 November 2015

2015-11-30T23:36:33Z

←Older revision		Revision as of 23:36, 30 November 2015
Line 9:		Line 9:
	[[Category: Merlino, A]]		[[Category: Merlino, A]]
	[[Category: Russo Krauss, I]]		[[Category: Russo Krauss, I]]
-	[[Category: Sica, F]]
	[[Category: Pica, A]]		[[Category: Pica, A]]
		+	[[Category: Sica, F]]

OCA: Protected "4yio" [edit=sysop:move=sysop]

2015-03-11T10:41:21Z

Protected "4yio" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:41, 11 March 2015

OCA: New page: '''Unreleased structure''' The entry 4yio is ON HOLD until Paper Publication Authors: Russo Krauss, I., Merlino, A., Pica, A., Sica, F. Description: X-ray structure of the iron/mangane...

2015-03-11T10:41:20Z

New page: '''Unreleased structure''' The entry 4yio is ON HOLD until Paper Publication Authors: Russo Krauss, I., Merlino, A., Pica, A., Sica, F. Description: X-ray structure of the iron/mangane...

New page

'''Unreleased structure'''

The entry 4yio is ON HOLD until Paper Publication

Authors: Russo Krauss, I., Merlino, A., Pica, A., Sica, F.

Description: X-ray structure of the iron/manganese cambialistic superoxide dismutase from Streptococcus thermophilus
[[Category: Unreleased Structures]]
[[Category: Merlino, A]]
[[Category: Russo Krauss, I]]
[[Category: Sica, F]]
[[Category: Pica, A]]