5bzt - Revision history

OCA at 06:13, 7 June 2023

2023-06-07T06:13:58Z

←Older revision		Revision as of 06:13, 7 June 2023
Line 3:		Line 3:
	<StructureSection load='5bzt' size='340' side='right'caption='[[5bzt]], [[Resolution\|resolution]] 1.25Å' scene=''>		<StructureSection load='5bzt' size='340' side='right'caption='[[5bzt]], [[Resolution\|resolution]] 1.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5bzt]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Lk3_transgenic_mice Lk3 transgenic mice~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BZT OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5BZT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5bzt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BZT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5BZT FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4XJ:2-(1,3-DIMETHOXYPROPAN-2-YL)-1,2,3,4-TETRAHYDROISOQUINOLIN-8-AMINE'>4XJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>~~</td></tr>~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4XJ:2-(1,3-DIMETHOXYPROPAN-2-YL)-1,2,3,4-TETRAHYDROISOQUINOLIN-8-AMINE'>4XJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5bzc\|5bzc]], [[5bze\|5bze]], [[5bzf\|5bzf]], [[5bzg\|5bzg]], [[5bzh\|5bzh]], [[5bzi\|5bzi]], [[5bzj\|5bzj]], [[5bzm\|5bzm]], [[5bzn\|5bzn]], [[5bzo\|5bzo]], [[5bzq\|5bzq]], [[5bzp\|5bzp]], [[5bzr\|5bzr]], [[5bzs\|5bzs]]</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5bzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bzt OCA], [https://pdbe.org/5bzt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5bzt RCSB], [https://www.ebi.ac.uk/pdbsum/5bzt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5bzt ProSAT]</span></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cd44, Ly-24 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5bzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bzt OCA], [~~http~~://pdbe.org/5bzt PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5bzt RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5bzt PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5bzt ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE]] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing.	+	[https://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing.

	==See Also==		==See Also==
Line 17:		Line 15:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Lk3 transgenic mice~~]]	+	[[Category: Mus musculus]]
-	[[Category: Finzel~~, B C~~]]	+	[[Category: Finzel BC]]
-	[[Category: Liu~~, L K]]~~	+	[[Category: Liu LK]]
-	~~[[Category: Link module]]~~	+
-	~~[[Category: Protein binding~~]]	+

OCA at 11:05, 18 March 2020

2020-03-18T11:05:43Z

←Older revision		Revision as of 11:05, 18 March 2020
Line 1:		Line 1:

	==Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule==		==Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule==
-	<StructureSection load='5bzt' size='340' side='right' caption='[[5bzt]], [[Resolution\|resolution]] 1.25Å' scene=''>	+	<StructureSection load='5bzt' size='340' side='right'caption='[[5bzt]], [[Resolution\|resolution]] 1.25Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5bzt]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BZT FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5bzt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BZT FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4XJ:2-(1,3-DIMETHOXYPROPAN-2-YL)-1,2,3,4-TETRAHYDROISOQUINOLIN-8-AMINE'>4XJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4XJ:2-(1,3-DIMETHOXYPROPAN-2-YL)-1,2,3,4-TETRAHYDROISOQUINOLIN-8-AMINE'>4XJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5bzc\|5bzc]], [[5bze\|5bze]], [[5bzf\|5bzf]], [[5bzg\|5bzg]], [[5bzh\|5bzh]], [[5bzi\|5bzi]], [[5bzj\|5bzj]], [[5bzm\|5bzm]], [[5bzn\|5bzn]], [[5bzo\|5bzo]], [[5bzq\|5bzq]], [[5bzp\|5bzp]], [[5bzr\|5bzr]], [[5bzs\|5bzs]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5bzc\|5bzc]], [[5bze\|5bze]], [[5bzf\|5bzf]], [[5bzg\|5bzg]], [[5bzh\|5bzh]], [[5bzi\|5bzi]], [[5bzj\|5bzj]], [[5bzm\|5bzm]], [[5bzn\|5bzn]], [[5bzo\|5bzo]], [[5bzq\|5bzq]], [[5bzp\|5bzp]], [[5bzr\|5bzr]], [[5bzs\|5bzs]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Cd44, Ly-24 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bzt OCA], [http://pdbe.org/5bzt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bzt RCSB], [http://www.ebi.ac.uk/pdbsum/5bzt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5bzt ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bzt OCA], [http://pdbe.org/5bzt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bzt RCSB], [http://www.ebi.ac.uk/pdbsum/5bzt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5bzt ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE]] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing.		[[http://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE]] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing.
		+
		+	==See Also==
		+	*[[CD44\|CD44]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
		+	[[Category: Lk3 transgenic mice]]
	[[Category: Finzel, B C]]		[[Category: Finzel, B C]]
	[[Category: Liu, L K]]		[[Category: Liu, L K]]
	[[Category: Link module]]		[[Category: Link module]]
	[[Category: Protein binding]]		[[Category: Protein binding]]

OCA at 10:19, 13 July 2016

2016-07-13T10:19:00Z

←Older revision		Revision as of 10:19, 13 July 2016
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5bzt is ON HOLD until Paper Publication~~	+	==Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule==
-		+	<StructureSection load='5bzt' size='340' side='right' caption='[[5bzt]], [[Resolution\|resolution]] 1.25Å' scene=''>
-	~~Authors: Liu, L.K., Finzel, B.C.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5bzt]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5BZT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5BZT FirstGlance]. <br>
-	~~Description:~~ Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4XJ:2-(1,3-DIMETHOXYPROPAN-2-YL)-1,2,3,4-TETRAHYDROISOQUINOLIN-8-AMINE'>4XJ</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5bzc\|5bzc]], [[5bze\|5bze]], [[5bzf\|5bzf]], [[5bzg\|5bzg]], [[5bzh\|5bzh]], [[5bzi\|5bzi]], [[5bzj\|5bzj]], [[5bzm\|5bzm]], [[5bzn\|5bzn]], [[5bzo\|5bzo]], [[5bzq\|5bzq]], [[5bzp\|5bzp]], [[5bzr\|5bzr]], [[5bzs\|5bzs]]</td></tr>
-	[[Category: Finzel, B.C]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5bzt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5bzt OCA], [http://pdbe.org/5bzt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5bzt RCSB], [http://www.ebi.ac.uk/pdbsum/5bzt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5bzt ProSAT]</span></td></tr>
-	[[Category: Liu, L.K]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CD44_MOUSE CD44_MOUSE]] Main cell surface receptor for hyaluronate. Adhesion to mucosal high endothelial venule and to types I and VI collagen. Probably involved in matrix adhesion, lymphocyte activation and lymph node homing.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Finzel, B C]]
		+	[[Category: Liu, L K]]
		+	[[Category: Link module]]
		+	[[Category: Protein binding]]

OCA at 10:16, 16 December 2015

2015-12-16T10:16:53Z

←Older revision		Revision as of 10:16, 16 December 2015
Line 7:		Line 7:
	Description: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule		Description: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Liu, L.K]]
	[[Category: Finzel, B.C]]		[[Category: Finzel, B.C]]
		+	[[Category: Liu, L.K]]

OCA at 13:35, 8 July 2015

2015-07-08T13:35:14Z

←Older revision		Revision as of 13:35, 8 July 2015
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5bzt is ON HOLD	+	The entry 5bzt is ON HOLD until Paper Publication

	Authors: Liu, L.K., Finzel, B.C.		Authors: Liu, L.K., Finzel, B.C.

OCA: Protected "5bzt" [edit=sysop:move=sysop]

2015-06-17T14:07:26Z

Protected "5bzt" [edit=sysop:move=sysop]

←Older revision

Revision as of 14:07, 17 June 2015

OCA: New page: '''Unreleased structure''' The entry 5bzt is ON HOLD Authors: Liu, L.K., Finzel, B.C. Description: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small m...

2015-06-17T14:07:25Z

New page: '''Unreleased structure''' The entry 5bzt is ON HOLD Authors: Liu, L.K., Finzel, B.C. Description: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small m...

New page

'''Unreleased structure'''

The entry 5bzt is ON HOLD

Authors: Liu, L.K., Finzel, B.C.

Description: Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
[[Category: Unreleased Structures]]
[[Category: Liu, L.K]]
[[Category: Finzel, B.C]]