5epe - Revision history

OCA at 12:51, 17 January 2024

2024-01-17T12:51:48Z

←Older revision		Revision as of 12:51, 17 January 2024
Line 3:		Line 3:
	<StructureSection load='5epe' size='340' side='right'caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='5epe' size='340' side='right'caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/~~Thida Thida~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EPE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thiobacillus_denitrificans_ATCC_25259 Thiobacillus denitrificans ATCC 25259]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EPE FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat" id="~~ligandDat~~">~~<scene name='pdbligand=NA:SODIUM+ION'>NA</scene>~~, ~~<scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.9Å</td></tr>
-	<tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene><~~/td~~></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-	<~~tr id~~='~~gene'><td class~~=~~"sblockLbl"><b>[[Gene\|Gene~~:~~]]</b~~></td>~~<td class="sblockDat">Tbd_1076 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292415 THIDA])~~</td></tr>	+
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [https://pdbe.org/5epe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [https://www.ebi.ac.uk/pdbsum/5epe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [https://pdbe.org/5epe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [https://www.ebi.ac.uk/pdbsum/5epe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q3SJX0_THIDA Q3SJX0_THIDA]

	==See Also==		==See Also==
Line 15:		Line 16:
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Thida~~]]	+	[[Category: Thiobacillus denitrificans ATCC 25259]]
-	[[Category: Ahmed, M]]	+	[[Category: Ahmed M]]
-	[[Category: Almo~~, S C~~]]	+	[[Category: Almo SC]]
-	[[Category: Bonanno, J]]	+	[[Category: Bonanno J]]
-	[[Category: Handing~~, K B~~]]	+	[[Category: Handing KB]]
-	[[Category: Hillerich~~, B S~~]]	+	[[Category: Hillerich BS]]
-	[[Category: Kutner, J]]	+	[[Category: Kutner J]]
-	[[Category: LaRowe, C]]	+	[[Category: LaRowe C]]
-	[[Category: Minor, W]]	+	[[Category: Minor W]]
-	~~[[Category: Structural genomic~~]]	+	[[Category: Seidel R]]
-	[[Category: Seidel, R]]	+	[[Category: Shabalin IG]]
-	[[Category: Shabalin~~, I G~~]]	+	[[Category: Stead M]]
-	[[Category: Stead, M]]	+
-	~~[[Category: Nysgrc]]~~	+
-	~~[[Category: Psi-biology]]~~	+
-	~~[[Category: S-adenosyl-l-homocysteine]]~~	+
-	~~[[Category: Sam-dependent methyltransferase]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 10:10, 13 April 2022

2022-04-13T10:10:33Z

←Older revision		Revision as of 10:10, 13 April 2022
Line 3:		Line 3:
	<StructureSection load='5epe' size='340' side='right'caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='5epe' size='340' side='right'caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Thida Thida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5EPE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thida Thida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5EPE FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Tbd_1076 ([~~http~~://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292415 THIDA])</td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Tbd_1076 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292415 THIDA])</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [~~http~~://pdbe.org/5epe PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5epe PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [https://pdbe.org/5epe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [https://www.ebi.ac.uk/pdbsum/5epe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>
	</table>		</table>

	==See Also==		==See Also==
-	*[[SAM-dependent ~~methyltransferase~~\|SAM-dependent ~~methyltransferase~~]]	+	*[[SAM-dependent methyltrasferase 3D structures\|SAM-dependent methyltrasferase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:01, 4 December 2019

2019-12-04T09:01:50Z

←Older revision		Revision as of 09:01, 4 December 2019
Line 1:		Line 1:

	==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==		==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==
-	<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>	+	<StructureSection load='5epe' size='340' side='right'caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thida Thida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EPE FirstGlance]. <br>		<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thida Thida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EPE FirstGlance]. <br>
Line 14:		Line 14:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Thida]]		[[Category: Thida]]
	[[Category: Ahmed, M]]		[[Category: Ahmed, M]]

OCA at 16:28, 15 August 2018

2018-08-15T16:28:03Z

←Older revision		Revision as of 16:28, 15 August 2018
Line 9:		Line 9:
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [http://pdbe.org/5epe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [http://www.ebi.ac.uk/pdbsum/5epe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [http://pdbe.org/5epe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [http://www.ebi.ac.uk/pdbsum/5epe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[SAM-dependent methyltransferase\|SAM-dependent methyltransferase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 12:39, 6 November 2017

2017-11-06T12:39:15Z

←Older revision		Revision as of 12:39, 6 November 2017
Line 3:		Line 3:
	<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EPE FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thida Thida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EPE FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
	<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [http://pdbe.org/5epe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [http://www.ebi.ac.uk/pdbsum/5epe PDBsum]</span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">Tbd_1076 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=292415 THIDA])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [http://pdbe.org/5epe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [http://www.ebi.ac.uk/pdbsum/5epe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5epe ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Thida]]
	[[Category: Ahmed, M]]		[[Category: Ahmed, M]]
	[[Category: Almo, S C]]		[[Category: Almo, S C]]

OCA at 10:15, 26 February 2016

2016-02-26T10:15:32Z

←Older revision		Revision as of 10:15, 26 February 2016
Line 1:		Line 1:
		+
	==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==		==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==
	<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>		<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution\|resolution]] 1.90Å' scene=''>

OCA: Protected "5epe" [edit=sysop:move=sysop]

2015-12-01T04:46:53Z

Protected "5epe" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:46, 1 December 2015

OCA: New page: ==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==
2015-12-01T04:46:50Z

New page: ==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine== <StructureSection load='5epe' size='340' side='right' cap...

New page
==Crystal structure of SAM-dependent methyltransferase from Thiobacillus denitrificans in complex with S-Adenosyl-L-homocysteine==
<StructureSection load='5epe' size='340' side='right' caption='[[5epe]], [[Resolution|resolution]] 1.90Å' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5epe]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5EPE OCA]. For a guided tour on the structure components use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5EPE FirstGlance]. 
</td></tr><tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl">[[Non-Standard_Residue|NonStd Res:]]</td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5epe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5epe OCA], [http://pdbe.org/5epe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5epe RCSB], [http://www.ebi.ac.uk/pdbsum/5epe PDBsum]</td></tr>
</table>
TOC
</StructureSection>
[[Category: Ahmed, M]]
[[Category: Almo, S C]]
[[Category: Bonanno, J]]
[[Category: Handing, K B]]
[[Category: Hillerich, B S]]
[[Category: Kutner, J]]
[[Category: LaRowe, C]]
[[Category: Minor, W]]
[[Category: Structural genomic]]
[[Category: Seidel, R]]
[[Category: Shabalin, I G]]
[[Category: Stead, M]]
[[Category: Nysgrc]]
[[Category: Psi-biology]]
[[Category: S-adenosyl-l-homocysteine]]
[[Category: Sam-dependent methyltransferase]]
[[Category: Transferase]]