5fdn - Revision history

OCA at 06:47, 19 July 2023

2023-07-19T06:47:26Z

←Older revision		Revision as of 06:47, 19 July 2023
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	<StructureSection load='5fdn' size='340' side='right'caption='[[5fdn]], [[Resolution\|resolution]] 2.20Å' scene=''>		<StructureSection load='5fdn' size='340' side='right'caption='[[5fdn]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5fdn]] is a 2 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Arath Arath~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FDN OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5FDN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5fdn]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FDN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FDN FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name~~=~~'pdbligand=ASP:ASPARTIC+ACID'>ASP</scene~~>, ~~<scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.2Å</td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>PPC3, PEPC, PPC, At3g14940, K15M2.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~3702 ARATH])</td~~><~~/tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks~~'>~~[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxylase Phosphoenolpyruvate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.31 4.1.1.31]~~ </~~span~~></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fdn OCA], [https://pdbe.org/5fdn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5fdn RCSB], [https://www.ebi.ac.uk/pdbsum/5fdn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5fdn ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fdn OCA], [~~http~~://pdbe.org/5fdn PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5fdn RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5fdn PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5fdn ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/CAPP3_ARATH CAPP3_ARATH]] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.	+	[https://www.uniprot.org/uniprot/CAPP3_ARATH CAPP3_ARATH] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.

	==See Also==		==See Also==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Arath~~]]	+	[[Category: Arabidopsis thaliana]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	~~[[Category: Phosphoenolpyruvate carboxylase]]~~	+	[[Category: Connell MB]]
-	[[Category: Connell~~, M B~~]]	+	[[Category: Jia Z]]
-	[[Category: Jia, Z]]	+	[[Category: Lee MJY]]
-	[[Category: Lee~~, M J.Y~~]]	+	[[Category: Plaxton WC]]
-	[[Category: Plaxton~~, W C]]~~	+
-	~~[[Category: Carboxylase inhibitor pepc functional tetramer]]~~	+
-	~~[[Category: Lyase~~]]	+

OCA at 08:03, 8 January 2020

2020-01-08T08:03:18Z

←Older revision		Revision as of 08:03, 8 January 2020
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	==Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate==		==Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate==
-	<StructureSection load='5fdn' size='340' side='right' caption='[[5fdn]], [[Resolution\|resolution]] 2.20Å' scene=''>	+	<StructureSection load='5fdn' size='340' side='right'caption='[[5fdn]], [[Resolution\|resolution]] 2.20Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5fdn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FDN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FDN FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5fdn]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FDN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FDN FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">PPC3, PEPC, PPC, At3g14940, K15M2.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxylase Phosphoenolpyruvate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.31 4.1.1.31] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxylase Phosphoenolpyruvate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.31 4.1.1.31] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fdn OCA], [http://pdbe.org/5fdn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fdn RCSB], [http://www.ebi.ac.uk/pdbsum/5fdn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fdn ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fdn OCA], [http://pdbe.org/5fdn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fdn RCSB], [http://www.ebi.ac.uk/pdbsum/5fdn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fdn ProSAT]</span></td></tr>
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Arath]]
		+	[[Category: Large Structures]]
	[[Category: Phosphoenolpyruvate carboxylase]]		[[Category: Phosphoenolpyruvate carboxylase]]
	[[Category: Connell, M B]]		[[Category: Connell, M B]]

OCA at 06:52, 6 October 2017

2017-10-06T06:52:04Z

←Older revision		Revision as of 06:52, 6 October 2017
Line 10:		Line 10:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/CAPP3_ARATH CAPP3_ARATH]] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.		[[http://www.uniprot.org/uniprot/CAPP3_ARATH CAPP3_ARATH]] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
		+
		+	==See Also==
		+	*[[Phosphoenolpyruvate carboxylase\|Phosphoenolpyruvate carboxylase]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 09:22, 10 March 2017

2017-03-10T09:22:11Z

←Older revision		Revision as of 09:22, 10 March 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5fdn is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate==
-		+	<StructureSection load='5fdn' size='340' side='right' caption='[[5fdn]], [[Resolution\|resolution]] 2.20Å' scene=''>
-	~~Authors~~: ~~Connell~~, M.B., ~~Lee, M~~.J.Y., ~~Plaxton~~, W.C., ~~Jia~~, Z.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5fdn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FDN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FDN FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure~~ of phosphoenolpyruvate carboxylase ~~from Arabidopsis thaliana in complex with aspartate and citrate~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxylase Phosphoenolpyruvate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.31 4.1.1.31] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5fdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5fdn OCA], [http://pdbe.org/5fdn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5fdn RCSB], [http://www.ebi.ac.uk/pdbsum/5fdn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5fdn ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/CAPP3_ARATH CAPP3_ARATH]] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Phosphoenolpyruvate carboxylase]]
		+	[[Category: Connell, M B]]
	[[Category: Jia, Z]]		[[Category: Jia, Z]]
-	[[Category: Plaxton, W.C]]	+	[[Category: Lee, M J.Y]]
-	[[Category: ~~Connell, M.B~~]]	+	[[Category: Plaxton, W C]]
-	[[Category: ~~Lee, M.J.Y~~]]	+	[[Category: Carboxylase inhibitor pepc functional tetramer]]
		+	[[Category: Lyase]]

OCA at 11:11, 1 June 2016

2016-06-01T11:11:45Z

←Older revision		Revision as of 11:11, 1 June 2016
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5fdn is ON HOLD	+	The entry 5fdn is ON HOLD until Paper Publication

	Authors: Connell, M.B., Lee, M.J.Y., Plaxton, W.C., Jia, Z.		Authors: Connell, M.B., Lee, M.J.Y., Plaxton, W.C., Jia, Z.

OCA: Protected "5fdn" [edit=sysop:move=sysop]

2015-12-23T11:31:09Z

Protected "5fdn" [edit=sysop:move=sysop]

←Older revision

Revision as of 11:31, 23 December 2015

OCA: New page: '''Unreleased structure''' The entry 5fdn is ON HOLD Authors: Connell, M.B., Lee, M.J.Y., Plaxton, W.C., Jia, Z. Description: Crystal structure of phosphoenolpyruvate carboxylase from ...

2015-12-23T11:31:07Z

New page: '''Unreleased structure''' The entry 5fdn is ON HOLD Authors: Connell, M.B., Lee, M.J.Y., Plaxton, W.C., Jia, Z. Description: Crystal structure of phosphoenolpyruvate carboxylase from ...

New page

'''Unreleased structure'''

The entry 5fdn is ON HOLD

Authors: Connell, M.B., Lee, M.J.Y., Plaxton, W.C., Jia, Z.

Description: Crystal structure of phosphoenolpyruvate carboxylase from Arabidopsis thaliana in complex with aspartate and citrate
[[Category: Unreleased Structures]]
[[Category: Jia, Z]]
[[Category: Plaxton, W.C]]
[[Category: Connell, M.B]]
[[Category: Lee, M.J.Y]]