5hb2 - Revision history

OCA at 07:29, 9 August 2023

2023-08-09T07:29:22Z

←Older revision		Revision as of 07:29, 9 August 2023
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	<StructureSection load='5hb2' size='340' side='right'caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>		<StructureSection load='5hb2' size='340' side='right'caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Chatd Chatd~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>
-	</td></tr><tr id='~~NonStdRes~~'><td class="sblockLbl"><b>[[~~Non-Standard_Residue~~\|~~NonStd Res~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.3Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5hax\|5hax]]~~, [[~~5hay~~\|~~5hay]], [[5haz\|5haz]], [[5hb1\|5hb1]], [[5hb0\|5hb0]], [[5hb3\|5hb3]], [[5hb4\|5hb4]], [[5hb5\|5hb5]], [[5hb6\|5hb6]], [[5hb7\|5hb7]], [[5hb8\|5hb8~~]]</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat">~~NIC96, CTHT_0008480 ([http~~:/~~/www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])~~</td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5hb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hb2 OCA], [https://pdbe.org/5hb2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5hb2 RCSB], [https://www.ebi.ac.uk/pdbsum/5hb2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5hb2 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5hb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hb2 OCA], [~~http~~://pdbe.org/5hb2 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5hb2 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5hb2 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5hb2 ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/NIC96_CHATD NIC96_CHATD]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Chatd~~]]	+	[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Hoelz, A]]	+	[[Category: Hoelz A]]
-	[[Category: Lin~~, D H~~]]	+	[[Category: Lin DH]]
-	[[Category: Schilbach, S]]	+	[[Category: Schilbach S]]
-	[[Category: Stuwe, T]]	+	[[Category: Stuwe T]]
-	~~[[Category: Nucleocytoplasmic transport]]~~	+
-	~~[[Category: Protein transport]]~~	+
-	~~[[Category: Transport protein~~]]	+

OCA at 11:40, 25 December 2019

2019-12-25T11:40:16Z

←Older revision		Revision as of 11:40, 25 December 2019
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	==Crystal Structure of Chaetomium thermophilum Nic96 SOL==		==Crystal Structure of Chaetomium thermophilum Nic96 SOL==
-	<StructureSection load='5hb2' size='340' side='right' caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>	+	<StructureSection load='5hb2' size='340' side='right'caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>		<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>
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	</div>		</div>
	<div class="pdbe-citations 5hb2" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5hb2" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Nucleoporin 3D structures\|Nucleoporin 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
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	</StructureSection>		</StructureSection>
	[[Category: Chatd]]		[[Category: Chatd]]
		+	[[Category: Large Structures]]
	[[Category: Hoelz, A]]		[[Category: Hoelz, A]]
	[[Category: Lin, D H]]		[[Category: Lin, D H]]

OCA at 12:46, 6 November 2017

2017-11-06T12:46:31Z

←Older revision		Revision as of 12:46, 6 November 2017
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	<StructureSection load='5hb2' size='340' side='right' caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>		<StructureSection load='5hb2' size='340' side='right' caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>
	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>		</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5hax\|5hax]], [[5hay\|5hay]], [[5haz\|5haz]], [[5hb1\|5hb1]], [[5hb0\|5hb0]], [[5hb3\|5hb3]], [[5hb4\|5hb4]], [[5hb5\|5hb5]], [[5hb6\|5hb6]], [[5hb7\|5hb7]], [[5hb8\|5hb8]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5hax\|5hax]], [[5hay\|5hay]], [[5haz\|5haz]], [[5hb1\|5hb1]], [[5hb0\|5hb0]], [[5hb3\|5hb3]], [[5hb4\|5hb4]], [[5hb5\|5hb5]], [[5hb6\|5hb6]], [[5hb7\|5hb7]], [[5hb8\|5hb8]]</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5hb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hb2 OCA], [http://pdbe.org/5hb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hb2 RCSB], [http://www.ebi.ac.uk/pdbsum/5hb2 PDBsum]</span></td></tr>	+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">NIC96, CTHT_0008480 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5hb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hb2 OCA], [http://pdbe.org/5hb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hb2 RCSB], [http://www.ebi.ac.uk/pdbsum/5hb2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5hb2 ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Chatd]]
	[[Category: Hoelz, A]]		[[Category: Hoelz, A]]
	[[Category: Lin, D H]]		[[Category: Lin, D H]]

OCA at 19:35, 10 May 2016

2016-05-10T19:35:00Z

←Older revision		Revision as of 19:35, 10 May 2016
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-	'''Unreleased structure'''

-	~~The entry~~ 5hb2 is ~~ON HOLD until Paper~~ Publication	+	==Crystal Structure of Chaetomium thermophilum Nic96 SOL==
		+	<StructureSection load='5hb2' size='340' side='right' caption='[[5hb2]], [[Resolution\|resolution]] 3.30Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5hb2]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5HB2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5HB2 FirstGlance]. <br>
		+	</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue\|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
		+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5hax\|5hax]], [[5hay\|5hay]], [[5haz\|5haz]], [[5hb1\|5hb1]], [[5hb0\|5hb0]], [[5hb3\|5hb3]], [[5hb4\|5hb4]], [[5hb5\|5hb5]], [[5hb6\|5hb6]], [[5hb7\|5hb7]], [[5hb8\|5hb8]]</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5hb2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5hb2 OCA], [http://pdbe.org/5hb2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5hb2 RCSB], [http://www.ebi.ac.uk/pdbsum/5hb2 PDBsum]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	The nuclear pore complex (NPC) controls the transport of macromolecules between the nucleus and cytoplasm, but its molecular architecture has thus far remained poorly defined. We biochemically reconstituted NPC core protomers and elucidated the underlying protein-protein interaction network. Flexible linker sequences, rather than interactions between the structured core scaffold nucleoporins, mediate the assembly of the inner ring complex and its attachment to the NPC coat. X-ray crystallographic analysis of these scaffold nucleoporins revealed the molecular details of their interactions with the flexible linker sequences and enabled construction of full-length atomic structures. By docking these structures into the cryoelectron tomographic reconstruction of the intact human NPC and validating their placement with our nucleoporin interactome, we built a composite structure of the NPC symmetric core that contains ~320,000 residues and accounts for ~56 megadaltons of the NPC's structured mass. Our approach provides a paradigm for the structure determination of similarly complex macromolecular assemblies.

-	~~Authors: Lin, D.H~~., ~~Stuwe~~, T., Schilbach, S., ~~Hoelz~~, A.	+	Architecture of the symmetric core of the nuclear pore.,Lin DH, Stuwe T, Schilbach S, Rundlet EJ, Perriches T, Mobbs G, Fan Y, Thierbach K, Huber FM, Collins LN, Davenport AM, Jeon YE, Hoelz A Science. 2016 Apr 15;352(6283):aaf1015. doi: 10.1126/science.aaf1015. Epub 2016, Apr 14. PMID:27081075<ref>PMID:27081075</ref>

-	~~Description:~~	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	~~[[Category: Unreleased Structures]]~~	+	</div>
-	~~[[Category: Lin~~, D.~~H]]~~	+	<div class="pdbe-citations 5hb2" style="background-color:#fffaf0;"></div>
-	~~[[Category~~: ~~Schilbach, S]]~~	+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
	[[Category: Hoelz, A]]		[[Category: Hoelz, A]]
		+	[[Category: Lin, D H]]
		+	[[Category: Schilbach, S]]
	[[Category: Stuwe, T]]		[[Category: Stuwe, T]]
		+	[[Category: Nucleocytoplasmic transport]]
		+	[[Category: Protein transport]]
		+	[[Category: Transport protein]]

OCA at 15:05, 10 February 2016

2016-02-10T15:05:05Z

←Older revision		Revision as of 15:05, 10 February 2016
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	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5hb2 is ON HOLD	+	The entry 5hb2 is ON HOLD until Paper Publication

	Authors: Lin, D.H., Stuwe, T., Schilbach, S., Hoelz, A.		Authors: Lin, D.H., Stuwe, T., Schilbach, S., Hoelz, A.

OCA: Protected "5hb2" [edit=sysop:move=sysop]

2016-01-07T10:26:34Z

Protected "5hb2" [edit=sysop:move=sysop]

←Older revision

Revision as of 10:26, 7 January 2016

OCA: New page: '''Unreleased structure''' The entry 5hb2 is ON HOLD Authors: Lin, D.H., Stuwe, T., Schilbach, S., Hoelz, A. Description: Category: Unreleased Structures Category: Lin, D.H [[...

2016-01-07T10:26:33Z

New page: '''Unreleased structure''' The entry 5hb2 is ON HOLD Authors: Lin, D.H., Stuwe, T., Schilbach, S., Hoelz, A. Description: Category: Unreleased Structures Category: Lin, D.H [[...

New page

'''Unreleased structure'''

The entry 5hb2 is ON HOLD

Authors: Lin, D.H., Stuwe, T., Schilbach, S., Hoelz, A.

Description:
[[Category: Unreleased Structures]]
[[Category: Lin, D.H]]
[[Category: Schilbach, S]]
[[Category: Hoelz, A]]
[[Category: Stuwe, T]]