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5jay - Revision history
2026-04-06T15:24:11Z
Revision history for this page on the wiki
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http://52.214.119.220/wiki/index.php?title=5jay&diff=3871298&oldid=prev
OCA at 10:57, 6 September 2023
2023-09-06T10:57:38Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 10:57, 6 September 2023</td>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>==Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans==</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><StructureSection load='5jay' size='340' side='right' caption='[[5jay]], [[Resolution|resolution]] 1.75&Aring;' scene=''></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><StructureSection load='5jay' size='340' side='right'caption='[[5jay]], [[Resolution|resolution]] 1.75&Aring;' scene=''></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Structural highlights ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Structural highlights ==</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><table><tr><td colspan='2'>[[5jay]] is a 2 chain structure with sequence from [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://en.wikipedia.org/wiki/<del style="color: red; font-weight: bold; text-decoration: none;">Burkholderia_cepacia_lb400 Burkholderia cepacia lb400</del>]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JAY OCA]. For a <b>guided tour on the structure components</b> use [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://<del style="color: red; font-weight: bold; text-decoration: none;">oca</del>.<del style="color: red; font-weight: bold; text-decoration: none;">weizmann.ac.il/oca-docs</del>/fgij/fg.htm?mol=5JAY FirstGlance]. <br></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><table><tr><td colspan='2'>[[5jay]] is a 2 chain structure with sequence from [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://en.wikipedia.org/wiki/<ins style="color: red; font-weight: bold; text-decoration: none;">Paraburkholderia_xenovorans_LB400 Paraburkholderia xenovorans LB400</ins>]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JAY OCA]. For a <b>guided tour on the structure components</b> use [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://<ins style="color: red; font-weight: bold; text-decoration: none;">proteopedia</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org</ins>/fgij/fg.htm?mol=5JAY FirstGlance]. <br></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div></td></tr><tr id='<del style="color: red; font-weight: bold; text-decoration: none;">gene</del>'><td class="sblockLbl"><b>[[<del style="color: red; font-weight: bold; text-decoration: none;">Gene</del>|<del style="color: red; font-weight: bold; text-decoration: none;">Gene</del>:]]</b></td><td class="sblockDat"<del style="color: red; font-weight: bold; text-decoration: none;">>bioF, Bxeno_A0198, Bxe_A4264 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&</del>id<del style="color: red; font-weight: bold; text-decoration: none;">=266265 Burkholderia cepacia LB400])</td></tr></del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></td></tr><tr id='<ins style="color: red; font-weight: bold; text-decoration: none;">method</ins>'><td class="sblockLbl"><b>[[<ins style="color: red; font-weight: bold; text-decoration: none;">Empirical_models</ins>|<ins style="color: red; font-weight: bold; text-decoration: none;">Method</ins>:]]</b></td><td class="sblockDat" id="<ins style="color: red; font-weight: bold; text-decoration: none;">methodDat</ins>"><ins style="color: red; font-weight: bold; text-decoration: none;">X-ray diffraction, </ins>[<ins style="color: red; font-weight: bold; text-decoration: none;">[Resolution|Resolution]</ins>] 1.<ins style="color: red; font-weight: bold; text-decoration: none;">75&#8491;</ins></td></tr></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;"><tr id='activity'><td class</del>="<del style="color: red; font-weight: bold; text-decoration: none;">sblockLbl</del>"><del style="color: red; font-weight: bold; text-decoration: none;"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'></del>[<del style="color: red; font-weight: bold; text-decoration: none;">http://en.wikipedia.org/wiki/Transferase Transferase</del>]<del style="color: red; font-weight: bold; text-decoration: none;">, with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.</del>1.<del style="color: red; font-weight: bold; text-decoration: none;">47 2.3.1.47] </span></del></td></tr></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://<ins style="color: red; font-weight: bold; text-decoration: none;">proteopedia</ins>.<ins style="color: red; font-weight: bold; text-decoration: none;">org</ins>/fgij/fg.htm?mol=5jay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jay OCA], [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://pdbe.org/5jay PDBe], [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://www.rcsb.org/pdb/explore.do?structureId=5jay RCSB], [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://www.ebi.ac.uk/pdbsum/5jay PDBsum], [<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://prosat.h-its.org/prosat/prosatexe?pdbcode=5jay ProSAT]</span></td></tr></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://<del style="color: red; font-weight: bold; text-decoration: none;">oca</del>.<del style="color: red; font-weight: bold; text-decoration: none;">weizmann.ac.il/oca-docs</del>/fgij/fg.htm?mol=5jay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jay OCA], [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://pdbe.org/5jay PDBe], [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://www.rcsb.org/pdb/explore.do?structureId=5jay RCSB], [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://www.ebi.ac.uk/pdbsum/5jay PDBsum], [<del style="color: red; font-weight: bold; text-decoration: none;">http</del>://prosat.h-its.org/prosat/prosatexe?pdbcode=5jay ProSAT]</span></td></tr></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Function ==</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>== Function ==</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[<del style="color: red; font-weight: bold; text-decoration: none;">[http</del>://www.uniprot.org/uniprot/<del style="color: red; font-weight: bold; text-decoration: none;">BIOF_BURXL BIOF_BURXL]</del>] Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. </div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[<ins style="color: red; font-weight: bold; text-decoration: none;">https</ins>://www.uniprot.org/uniprot/<ins style="color: red; font-weight: bold; text-decoration: none;">BIOF_PARXL BIOF_PARXL</ins>] Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.<ins style="color: red; font-weight: bold; text-decoration: none;">[HAMAP-Rule:MF_01693]</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>__TOC__</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>__TOC__</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div></StructureSection></div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div></StructureSection></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Burkholderia cepacia lb400</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Large Structures</ins>]]</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[[Category: <del style="color: red; font-weight: bold; text-decoration: none;">Transferase]]</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[[Category: <ins style="color: red; font-weight: bold; text-decoration: none;">Paraburkholderia xenovorans LB400</ins>]]</div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">[[Category: Structural genomic]]</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del style="color: red; font-weight: bold; text-decoration: none;">[[Category: Ssgcid</del>]]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div></div></td></tr>
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OCA
http://52.214.119.220/wiki/index.php?title=5jay&diff=2818574&oldid=prev
OCA: Protected "5jay" [edit=sysop:move=sysop]
2017-11-16T12:51:28Z
<p>Protected "<a href="/wiki/index.php/5jay" title="5jay">5jay</a>" [edit=sysop:move=sysop]</p>
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<td colspan='2' style="background-color: white; color:black;">←Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 12:51, 16 November 2017</td>
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OCA
http://52.214.119.220/wiki/index.php?title=5jay&diff=2818573&oldid=prev
OCA: New page: ==Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans== <StructureSection load='5jay' size='340' side='right' caption='5jay, resolution...
2017-11-16T12:51:27Z
<p>New page: ==Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans== <StructureSection load='5jay' size='340' side='right' caption='<a href="/wiki/index.php/5jay" title="5jay">5jay</a>, <a href="/wiki/index.php/Resolution" title="Resolution">resolution</a>...</p>
<p><b>New page</b></p><div><br />
==Crystal Structure of an 8-amino-7-oxononanoate Synthase from Burkholderia xenovorans==<br />
<StructureSection load='5jay' size='340' side='right' caption='[[5jay]], [[Resolution|resolution]] 1.75&Aring;' scene=''><br />
== Structural highlights ==<br />
<table><tr><td colspan='2'>[[5jay]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Burkholderia_cepacia_lb400 Burkholderia cepacia lb400]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JAY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5JAY FirstGlance]. <br><br />
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bioF, Bxeno_A0198, Bxe_A4264 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266265 Burkholderia cepacia LB400])</td></tr><br />
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Transferase Transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.47 2.3.1.47] </span></td></tr><br />
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5jay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jay OCA], [http://pdbe.org/5jay PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5jay RCSB], [http://www.ebi.ac.uk/pdbsum/5jay PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5jay ProSAT]</span></td></tr><br />
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== Function ==<br />
[[http://www.uniprot.org/uniprot/BIOF_BURXL BIOF_BURXL]] Catalyzes the decarboxylative condensation of pimeloyl-[acyl-carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. <br />
__TOC__<br />
</StructureSection><br />
[[Category: Burkholderia cepacia lb400]]<br />
[[Category: Transferase]]<br />
[[Category: Structural genomic]]<br />
[[Category: Ssgcid]]</div>
OCA