5m2t - Revision history

OCA at 18:22, 1 November 2023

2023-11-01T18:22:39Z

←Older revision		Revision as of 18:22, 1 November 2023
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	<StructureSection load='5m2t' size='340' side='right'caption='[[5m2t]], [[Resolution\|resolution]] 1.03Å' scene=''>		<StructureSection load='5m2t' size='340' side='right'caption='[[5m2t]], [[Resolution\|resolution]] 1.03Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5m2t]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M2T OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5M2T FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5m2t]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M2T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M2T FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 1.03Å</td></tr>
-	~~<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5c80\|5c80]]</td></tr>~~	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m2t OCA], [https://pdbe.org/5m2t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m2t RCSB], [https://www.ebi.ac.uk/pdbsum/5m2t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m2t ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m2t OCA], [~~http~~://pdbe.org/5m2t PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5m2t RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5m2t PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5m2t ProSAT]</span></td></tr>	+
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q9K4U1_VIBCL Q9K4U1_VIBCL]

	==See Also==		==See Also==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Uridine phosphorylase~~]]	+	[[Category: Vibrio cholerae]]
-	[[Category: Betzel, C]]	+	[[Category: Betzel C]]
-	[[Category: Gabdulkhakov~~, A G~~]]	+	[[Category: Gabdulkhakov AG]]
-	[[Category: Lashkov~~, A A~~]]	+	[[Category: Lashkov AA]]
-	[[Category: Mikhailov~~, A M~~]]	+	[[Category: Mikhailov AM]]
-	[[Category: Prokofev~~, I I]]~~	+	[[Category: Prokofev II]]
-	~~[[Category: Rossmann fold]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 10:59, 12 August 2020

2020-08-12T10:59:33Z

←Older revision		Revision as of 10:59, 12 August 2020
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	==X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution==		==X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution==
-	<StructureSection load='5m2t' size='340' side='right' caption='[[5m2t]], [[Resolution\|resolution]] 1.03Å' scene=''>	+	<StructureSection load='5m2t' size='340' side='right'caption='[[5m2t]], [[Resolution\|resolution]] 1.03Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5m2t]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M2T OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5M2T FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5m2t]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M2T OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5M2T FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5c80\|5c80]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5c80\|5c80]]</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m2t OCA], [http://pdbe.org/5m2t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m2t RCSB], [http://www.ebi.ac.uk/pdbsum/5m2t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m2t ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m2t OCA], [http://pdbe.org/5m2t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m2t RCSB], [http://www.ebi.ac.uk/pdbsum/5m2t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m2t ProSAT]</span></td></tr>
	</table>		</table>
		+
		+	==See Also==
		+	*[[Uridine phosphorylase 3D structures\|Uridine phosphorylase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Uridine phosphorylase]]		[[Category: Uridine phosphorylase]]
	[[Category: Betzel, C]]		[[Category: Betzel, C]]

OCA at 07:24, 15 November 2017

2017-11-15T07:24:59Z

←Older revision		Revision as of 07:24, 15 November 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5m2t is ON HOLD until Oct 13 2018~~	+	==X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution==
-		+	<StructureSection load='5m2t' size='340' side='right' caption='[[5m2t]], [[Resolution\|resolution]] 1.03Å' scene=''>
-	~~Authors: Prokofev, I.I., Lashkov, A.A., Gabdulkhakov, A.G., Betzel, C., Mikhailov, A.M.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5m2t]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M2T OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M2T FirstGlance]. <br>
-	~~Description:~~ X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=URI:URIDINE'>URI</scene></td></tr>
-	[[~~Category~~: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5c80\|5c80]]</td></tr>
-	[[~~Category~~: ~~Prokofev~~, I.I]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m2t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m2t OCA], [http://pdbe.org/5m2t PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m2t RCSB], [http://www.ebi.ac.uk/pdbsum/5m2t PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m2t ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Uridine phosphorylase]]
	[[Category: Betzel, C]]		[[Category: Betzel, C]]
-	[[Category: Gabdulkhakov, A.G]]	+	[[Category: Gabdulkhakov, A G]]
-	[[Category: Mikhailov, A.M]]	+	[[Category: Lashkov, A A]]
-	[[Category: ~~Lashkov~~, ~~A.A~~]]	+	[[Category: Mikhailov, A M]]
		+	[[Category: Prokofev, I I]]
		+	[[Category: Rossmann fold]]
		+	[[Category: Transferase]]

OCA at 11:00, 9 March 2017

2017-03-09T11:00:56Z

←Older revision		Revision as of 11:00, 9 March 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5m2t is ON HOLD	+	The entry 5m2t is ON HOLD until Oct 13 2018

-	Authors: Prokofev, I.I., Lashkov, A.A., ~~Gabdoulkhakov~~, A.G., Betzel, C., Mikhailov, A.M.	+	Authors: Prokofev, I.I., Lashkov, A.A., Gabdulkhakov, A.G., Betzel, C., Mikhailov, A.M.

	Description: X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution		Description: X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution
Line 9:		Line 9:
	[[Category: Prokofev, I.I]]		[[Category: Prokofev, I.I]]
	[[Category: Betzel, C]]		[[Category: Betzel, C]]
		+	[[Category: Gabdulkhakov, A.G]]
	[[Category: Mikhailov, A.M]]		[[Category: Mikhailov, A.M]]
	[[Category: Lashkov, A.A]]		[[Category: Lashkov, A.A]]
-	[[Category: Gabdoulkhakov, A.G]]

OCA: Protected "5m2t" [edit=sysop:move=sysop]

2016-10-19T15:08:02Z

Protected "5m2t" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:08, 19 October 2016

OCA: New page: '''Unreleased structure''' The entry 5m2t is ON HOLD Authors: Prokofev, I.I., Lashkov, A.A., Gabdoulkhakov, A.G., Betzel, C., Mikhailov, A.M. Description: X-ray structure of uridine ph...

2016-10-19T15:08:01Z

New page: '''Unreleased structure''' The entry 5m2t is ON HOLD Authors: Prokofev, I.I., Lashkov, A.A., Gabdoulkhakov, A.G., Betzel, C., Mikhailov, A.M. Description: X-ray structure of uridine ph...

New page

'''Unreleased structure'''

The entry 5m2t is ON HOLD

Authors: Prokofev, I.I., Lashkov, A.A., Gabdoulkhakov, A.G., Betzel, C., Mikhailov, A.M.

Description: X-ray structure of uridine phosphorylase from Vibrio cholerae in complex with uridine at 1.03 A resolution
[[Category: Unreleased Structures]]
[[Category: Prokofev, I.I]]
[[Category: Betzel, C]]
[[Category: Mikhailov, A.M]]
[[Category: Lashkov, A.A]]
[[Category: Gabdoulkhakov, A.G]]