5mcy - Revision history

OCA at 18:38, 1 November 2023

2023-11-01T18:38:46Z

←Older revision		Revision as of 18:38, 1 November 2023
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	<SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>		<SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5MCY FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [~~http~~://pdbe.org/5mcy PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution\|Resolution]] 8.8Å</td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [https://pdbe.org/5mcy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [https://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/B6DRA0_9HIV1 B6DRA0_9HIV1]
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">
	== Publication Abstract from PubMed ==		== Publication Abstract from PubMed ==
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	==See Also==		==See Also==
	*[[Gag polyprotein 3D structures\|Gag polyprotein 3D structures]]		*[[Gag polyprotein 3D structures\|Gag polyprotein 3D structures]]
		+	*[[Virus coat proteins 3D structures\|Virus coat proteins 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 24:		Line 28:
	[[Category: Human immunodeficiency virus 1]]		[[Category: Human immunodeficiency virus 1]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Briggs~~, J A.G~~]]	+	[[Category: Briggs JAG]]
-	[[Category: Glass, B]]	+	[[Category: Glass B]]
-	[[Category: Hagen~~, W J.H~~]]	+	[[Category: Hagen WJH]]
-	[[Category: Kraeusslich, H G]]	+	[[Category: Kraeusslich H-G]]
-	[[Category: Mattei, S]]	+	[[Category: Mattei S]]
-	~~[[Category: Capsid]]~~	+
-	~~[[Category: Hiv-1]]~~	+
-	~~[[Category: Pentamer]]~~	+
-	~~[[Category: Retrovirus]]~~	+
-	~~[[Category: Viral protein~~]]	+

OCA at 20:55, 10 April 2020

2020-04-10T20:55:56Z

←Older revision		Revision as of 20:55, 10 April 2020
Line 3:		Line 3:
	<SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>		<SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5MCY FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
-	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [http://pdbe.org/5mcy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [http://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>	+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [http://pdbe.org/5mcy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [http://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>
	</table>		</table>
	<div style="background-color:#fffaf0;">		<div style="background-color:#fffaf0;">

OCA at 19:04, 6 March 2020

2020-03-06T19:04:32Z

←Older revision		Revision as of 19:04, 6 March 2020
Line 1:		Line 1:

	==The structure of the mature HIV-1 CA pentamer in intact virus particles==		==The structure of the mature HIV-1 CA pentamer in intact virus particles==
-	<~~StructureSection~~ load='5mcy' size='340' side='right' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>	+	<SX load='5mcy' size='340' side='right' viewer='molstar' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MCY FirstGlance]. <br>		<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
Line 15:		Line 15:
	</div>		</div>
	<div class="pdbe-citations 5mcy" style="background-color:#fffaf0;"></div>		<div class="pdbe-citations 5mcy" style="background-color:#fffaf0;"></div>
		+
		+	==See Also==
		+	*[[Gag polyprotein 3D structures\|Gag polyprotein 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
	__TOC__		__TOC__
-	</~~StructureSection~~>	+	</SX>
	[[Category: Human immunodeficiency virus 1]]		[[Category: Human immunodeficiency virus 1]]
		+	[[Category: Large Structures]]
	[[Category: Briggs, J A.G]]		[[Category: Briggs, J A.G]]
	[[Category: Glass, B]]		[[Category: Glass, B]]

OCA at 16:16, 2 January 2017

2017-01-02T16:16:03Z

←Older revision		Revision as of 16:16, 2 January 2017
Line 1:		Line 1:
-	'''Unreleased structure'''

-	The ~~entry~~ 5mcy is ~~ON HOLD~~	+	==The structure of the mature HIV-1 CA pentamer in intact virus particles==
		+	<StructureSection load='5mcy' size='340' side='right' caption='[[5mcy]], [[Resolution\|resolution]] 8.80Å' scene=''>
		+	== Structural highlights ==
		+	<table><tr><td colspan='2'>[[5mcy]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_1 Human immunodeficiency virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MCY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5MCY FirstGlance]. <br>
		+	</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5mcy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mcy OCA], [http://pdbe.org/5mcy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mcy RCSB], [http://www.ebi.ac.uk/pdbsum/5mcy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mcy ProSAT]</span></td></tr>
		+	</table>
		+	<div style="background-color:#fffaf0;">
		+	== Publication Abstract from PubMed ==
		+	HIV-1 contains a cone-shaped capsid encasing the viral genome. This capsid is thought to follow fullerene geometry-a curved hexameric lattice of the capsid protein, CA, closed by incorporating 12 CA pentamers. Current models for core structure are based on crystallography of hexameric and cross-linked pentameric CA, electron microscopy of tubular CA arrays, and simulations. Here, we report subnanometer-resolution cryo-electron tomography structures of hexameric and pentameric CA within intact HIV-1 particles. Whereas the hexamer structure is compatible with crystallography studies, the pentamer forms using different interfaces. Determining multiple structures revealed how CA flexes to form the variably curved core shell. We show that HIV-1 CA assembles both aberrant and perfect fullerene cones, supporting models in which conical cores assemble de novo after maturation.

-	~~Authors~~:	+	The structure and flexibility of conical HIV-1 capsids determined within intact virions.,Mattei S, Glass B, Hagen WJ, Krausslich HG, Briggs JA Science. 2016 Dec 16;354(6318):1434-1437. PMID:27980210<ref>PMID:27980210</ref>

-	~~Description~~:	+	From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
-	[[Category: ~~Unreleased Structures~~]]	+	</div>
		+	<div class="pdbe-citations 5mcy" style="background-color:#fffaf0;"></div>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Human immunodeficiency virus 1]]
		+	[[Category: Briggs, J A.G]]
		+	[[Category: Glass, B]]
		+	[[Category: Hagen, W J.H]]
		+	[[Category: Kraeusslich, H G]]
		+	[[Category: Mattei, S]]
		+	[[Category: Capsid]]
		+	[[Category: Hiv-1]]
		+	[[Category: Pentamer]]
		+	[[Category: Retrovirus]]
		+	[[Category: Viral protein]]

OCA: Protected "5mcy" [edit=sysop:move=sysop]

2016-12-09T16:39:41Z

Protected "5mcy" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:39, 9 December 2016

OCA: New page: '''Unreleased structure''' The entry 5mcy is ON HOLD Authors: Description: Category: Unreleased Structures

2016-12-09T16:39:39Z

New page: '''Unreleased structure''' The entry 5mcy is ON HOLD Authors: Description: Category: Unreleased Structures

New page

'''Unreleased structure'''

The entry 5mcy is ON HOLD

Authors:

Description:
[[Category: Unreleased Structures]]