5nf1 - Revision history

OCA at 12:52, 15 November 2023

2023-11-15T12:52:17Z

←Older revision		Revision as of 12:52, 15 November 2023
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	<StructureSection load='5nf1' size='340' side='right'caption='[[5nf1]], [[Resolution\|resolution]] 2.70Å' scene=''>		<StructureSection load='5nf1' size='340' side='right'caption='[[5nf1]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5nf1]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF1 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5NF1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5nf1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus_str._Delta_H Methanothermobacter thermautotrophicus str. Delta H]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NF1 FirstGlance]. <br>
-	</td></tr><tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"~~><span class~~=~~'plainlinks'~~>[~~http://en.wikipedia.org/wiki/Phosphoglycerol_geranylgeranyltransferase Phosphoglycerol geranylgeranyltransferase~~]~~, with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=~~2.~~5.1.41 2.5.1.41] </span>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.697Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5nf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf1 OCA], [~~http~~://pdbe.org/5nf1 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5nf1 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5nf1 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf1 OCA], [https://pdbe.org/5nf1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nf1 RCSB], [https://www.ebi.ac.uk/pdbsum/5nf1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GGGPS_METTH GGGPS_METTH]] Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids (By similarity).[HAMAP-Rule:MF_00112]	+	[https://www.uniprot.org/uniprot/GGGPS_METTH GGGPS_METTH] Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids (By similarity).[HAMAP-Rule:MF_00112]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Phosphoglycerol geranylgeranyltransferase~~]]	+	[[Category: Methanothermobacter thermautotrophicus str. Delta H]]
-	[[Category: Babinger, P]]	+	[[Category: Babinger P]]
-	[[Category: Linde, M]]	+	[[Category: Linde M]]
-	[[Category: Rajendran, C]]	+	[[Category: Rajendran C]]
-	[[Category: Sterner, R]]	+	[[Category: Sterner R]]
-	~~[[Category: Methanobacterium thermoautotrophicum]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 12:03, 26 August 2020

2020-08-26T12:03:27Z

←Older revision		Revision as of 12:03, 26 August 2020
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	==crystal structure of variants==		==crystal structure of variants==
-	<StructureSection load='5nf1' size='340' side='right' caption='[[5nf1]], [[Resolution\|resolution]] 2.70Å' scene=''>	+	<StructureSection load='5nf1' size='340' side='right'caption='[[5nf1]], [[Resolution\|resolution]] 2.70Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5nf1]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF1 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5NF1 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5nf1]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF1 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5NF1 FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglycerol_geranylgeranyltransferase Phosphoglycerol geranylgeranyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.41 2.5.1.41] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglycerol_geranylgeranyltransferase Phosphoglycerol geranylgeranyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.41 2.5.1.41] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5nf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf1 OCA], [http://pdbe.org/5nf1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nf1 RCSB], [http://www.ebi.ac.uk/pdbsum/5nf1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf1 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5nf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf1 OCA], [http://pdbe.org/5nf1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nf1 RCSB], [http://www.ebi.ac.uk/pdbsum/5nf1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf1 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Phosphoglycerol geranylgeranyltransferase]]		[[Category: Phosphoglycerol geranylgeranyltransferase]]
	[[Category: Babinger, P]]		[[Category: Babinger, P]]

OCA at 05:18, 16 May 2018

2018-05-16T05:18:46Z

←Older revision		Revision as of 05:18, 16 May 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5nf1 is ~~ON HOLD~~	+	==crystal structure of variants==
-		+	<StructureSection load='5nf1' size='340' side='right' caption='[[5nf1]], [[Resolution\|resolution]] 2.70Å' scene=''>
-	~~Authors~~: ~~Linde~~, M., ~~Rajendran~~, C., ~~Babinger, P~~., ~~Sterner, R~~.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5nf1]] is a 6 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NF1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NF1 FirstGlance]. <br>
-	~~Description~~: ~~crystal structure~~ of ~~variants~~	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglycerol_geranylgeranyltransferase Phosphoglycerol geranylgeranyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.41 2.5.1.41] </span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5nf1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nf1 OCA], [http://pdbe.org/5nf1 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5nf1 RCSB], [http://www.ebi.ac.uk/pdbsum/5nf1 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5nf1 ProSAT]</span></td></tr>
-	[[Category: ~~Sterner~~, R]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GGGPS_METTH GGGPS_METTH]] Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids (By similarity).[HAMAP-Rule:MF_00112]
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Phosphoglycerol geranylgeranyltransferase]]
		+	[[Category: Babinger, P]]
	[[Category: Linde, M]]		[[Category: Linde, M]]
-	[[Category: Babinger, P]]
	[[Category: Rajendran, C]]		[[Category: Rajendran, C]]
		+	[[Category: Sterner, R]]
		+	[[Category: Methanobacterium thermoautotrophicum]]
		+	[[Category: Transferase]]

OCA: Protected "5nf1" [edit=sysop:move=sysop]

2017-04-05T09:58:16Z

Protected "5nf1" [edit=sysop:move=sysop]

←Older revision

Revision as of 09:58, 5 April 2017

OCA: New page: '''Unreleased structure''' The entry 5nf1 is ON HOLD Authors: Linde, M., Rajendran, C., Babinger, P., Sterner, R. Description: crystal structure of variants [[Category: Unreleased Stru...

2017-04-05T09:58:15Z

New page: '''Unreleased structure''' The entry 5nf1 is ON HOLD Authors: Linde, M., Rajendran, C., Babinger, P., Sterner, R. Description: crystal structure of variants [[Category: Unreleased Stru...

New page

'''Unreleased structure'''

The entry 5nf1 is ON HOLD

Authors: Linde, M., Rajendran, C., Babinger, P., Sterner, R.

Description: crystal structure of variants
[[Category: Unreleased Structures]]
[[Category: Sterner, R]]
[[Category: Linde, M]]
[[Category: Babinger, P]]
[[Category: Rajendran, C]]