5ux7 - Revision history

OCA at 14:30, 6 March 2024

2024-03-06T14:30:08Z

←Older revision		Revision as of 14:30, 6 March 2024
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	<StructureSection load='5ux7' size='340' side='right'caption='[[5ux7]], [[Resolution\|resolution]] 2.69Å' scene=''>		<StructureSection load='5ux7' size='340' side='right'caption='[[5ux7]], [[Resolution\|resolution]] 2.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ux7]] is a 4 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Baker's_yeast Baker's yeast~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UX7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5UX7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ux7]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UX7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5UX7 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G6P:ALPHA-D-GLUCOSE-6-PHOSPHATE'>G6P</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UDX:URIDINE-5-DIPHOSPHATE-XYLOPYRANOSE'>UDX</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.69Å</td></tr>
-	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GSY2, YLR258W, L8479.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G6P:ALPHA-D-GLUCOSE-6-PHOSPHATE'>G6P</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UDX:URIDINE-5-DIPHOSPHATE-XYLOPYRANOSE'>UDX</scene></td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycogen(starch)_synthase Glycogen(starch) synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.11 2.4.1.11] </span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ux7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ux7 OCA], [https://pdbe.org/5ux7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ux7 RCSB], [https://www.ebi.ac.uk/pdbsum/5ux7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ux7 ProSAT]</span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5ux7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ux7 OCA], [~~http~~://pdbe.org/5ux7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5ux7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5ux7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5ux7 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/GYS2_YEAST GYS2_YEAST]] Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan. Is believed to regulate the synthesis of glycogen.	+	[https://www.uniprot.org/uniprot/GYS2_YEAST GYS2_YEAST] Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan. Is believed to regulate the synthesis of glycogen.
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: Baker's yeast]]
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Hurley, T D~~]]	+	[[Category: Saccharomyces cerevisiae S288C]]
-	[[Category: ~~Mahalingan, K K~~]]	+	[[Category: Hurley TD]]
-	[[Category: ~~Complex]]~~	+	[[Category: Mahalingan KK]]
-	~~[[Category: Glycogen synthase]]~~	+
-	~~[[Category: Sugar]]~~	+
-	~~[[Category: Transferase]]~~	+
-	~~[[Category: Udp-xylose~~]]	+

OCA at 08:26, 30 September 2020

2020-09-30T08:26:02Z

←Older revision		Revision as of 08:26, 30 September 2020
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	==Activated state yeast Glycogen Synthase in complex with UDP-xylose==		==Activated state yeast Glycogen Synthase in complex with UDP-xylose==
-	<StructureSection load='5ux7' size='340' side='right' caption='[[5ux7]], [[Resolution\|resolution]] 2.69Å' scene=''>	+	<StructureSection load='5ux7' size='340' side='right'caption='[[5ux7]], [[Resolution\|resolution]] 2.69Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5ux7]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UX7 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5UX7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5ux7]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Baker's_yeast Baker's yeast]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UX7 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5UX7 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=G6P:ALPHA-D-GLUCOSE-6-PHOSPHATE'>G6P</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UDX:URIDINE-5-DIPHOSPHATE-XYLOPYRANOSE'>UDX</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=G6P:ALPHA-D-GLUCOSE-6-PHOSPHATE'>G6P</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UDX:URIDINE-5-DIPHOSPHATE-XYLOPYRANOSE'>UDX</scene></td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">GSY2, YLR258W, L8479.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=559292 Baker's yeast])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycogen(starch)_synthase Glycogen(starch) synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.11 2.4.1.11] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycogen(starch)_synthase Glycogen(starch) synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.11 2.4.1.11] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ux7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ux7 OCA], [http://pdbe.org/5ux7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ux7 RCSB], [http://www.ebi.ac.uk/pdbsum/5ux7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ux7 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5ux7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ux7 OCA], [http://pdbe.org/5ux7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ux7 RCSB], [http://www.ebi.ac.uk/pdbsum/5ux7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ux7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
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	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Baker's yeast]]
		+	[[Category: Large Structures]]
	[[Category: Hurley, T D]]		[[Category: Hurley, T D]]
	[[Category: Mahalingan, K K]]		[[Category: Mahalingan, K K]]

OCA at 06:24, 28 February 2018

2018-02-28T06:24:14Z

←Older revision		Revision as of 06:24, 28 February 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5ux7 is ~~ON HOLD until Paper Publication~~	+	==Activated state yeast Glycogen Synthase in complex with UDP-xylose==
-		+	<StructureSection load='5ux7' size='340' side='right' caption='[[5ux7]], [[Resolution\|resolution]] 2.69Å' scene=''>
-	~~Authors~~: ~~Mahalingan~~, K.K., ~~Hurley~~, T.D.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5ux7]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5UX7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5UX7 FirstGlance]. <br>
-	~~Description~~: ~~Activated state yeast Glycogen Synthase in complex with~~ UDP-~~xylose~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=G6P:ALPHA-D-GLUCOSE-6-PHOSPHATE'>G6P</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene>, <scene name='pdbligand=UDX:URIDINE-5-DIPHOSPHATE-XYLOPYRANOSE'>UDX</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycogen(starch)_synthase Glycogen(starch) synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.11 2.4.1.11] </span></td></tr>
-	[[Category: Mahalingan, K.K]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ux7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ux7 OCA], [http://pdbe.org/5ux7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ux7 RCSB], [http://www.ebi.ac.uk/pdbsum/5ux7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ux7 ProSAT]</span></td></tr>
-	[[Category: ~~Hurley, T.D~~]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/GYS2_YEAST GYS2_YEAST]] Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan. Is believed to regulate the synthesis of glycogen.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Hurley, T D]]
		+	[[Category: Mahalingan, K K]]
		+	[[Category: Complex]]
		+	[[Category: Glycogen synthase]]
		+	[[Category: Sugar]]
		+	[[Category: Transferase]]
		+	[[Category: Udp-xylose]]

OCA at 13:49, 27 September 2017

2017-09-27T13:49:59Z

←Older revision		Revision as of 13:49, 27 September 2017
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	Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose		Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Hurley, T.D]]
	[[Category: Mahalingan, K.K]]		[[Category: Mahalingan, K.K]]
		+	[[Category: Hurley, T.D]]

OCA at 11:24, 5 April 2017

2017-04-05T11:24:47Z

←Older revision		Revision as of 11:24, 5 April 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5ux7 is ON HOLD	+	The entry 5ux7 is ON HOLD until Paper Publication

	Authors: Mahalingan, K.K., Hurley, T.D.		Authors: Mahalingan, K.K., Hurley, T.D.

OCA at 19:28, 15 March 2017

2017-03-15T19:28:33Z

←Older revision		Revision as of 19:28, 15 March 2017
Line 7:		Line 7:
	Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose		Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Mahalingan, K.K]]
	[[Category: Hurley, T.D]]		[[Category: Hurley, T.D]]
		+	[[Category: Mahalingan, K.K]]

OCA: Protected "5ux7" [edit=sysop:move=sysop]

2017-03-09T15:03:19Z

Protected "5ux7" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:03, 9 March 2017

OCA: New page: '''Unreleased structure''' The entry 5ux7 is ON HOLD Authors: Mahalingan, K.K., Hurley, T.D. Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose [[Category:...

2017-03-09T15:03:18Z

New page: '''Unreleased structure''' The entry 5ux7 is ON HOLD Authors: Mahalingan, K.K., Hurley, T.D. Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose [[Category:...

New page

'''Unreleased structure'''

The entry 5ux7 is ON HOLD

Authors: Mahalingan, K.K., Hurley, T.D.

Description: Activated state yeast Glycogen Synthase in complex with UDP-xylose
[[Category: Unreleased Structures]]
[[Category: Mahalingan, K.K]]
[[Category: Hurley, T.D]]