5v27 - Revision history

OCA at 13:40, 4 October 2023

2023-10-04T13:40:03Z

←Older revision		Revision as of 13:40, 4 October 2023
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	<StructureSection load='5v27' size='340' side='right'caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='5v27' size='340' side='right'caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure with sequence from [~~http~~://en.wikipedia.org/wiki/~~Cupmc Cupmc~~]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5V27 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_metallidurans_CH34 Cupriavidus metallidurans CH34]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V27 FirstGlance]. <br>
-	</td></tr><tr id='~~ligand~~'><td class="sblockLbl"><b>[[~~Ligand~~\|~~Ligands~~:]]</b></td><td class="sblockDat"~~><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.352Å</td></tr>
-	~~<tr~~ id~~='related'><td class~~="~~sblockLbl~~">~~<b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5v28\|5v28]]~~, [[~~5v26~~\|~~5v26~~]]</td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	<tr id='~~gene~~'><td class="sblockLbl"><b>[[~~Gene~~\|~~Gene~~:]]</b></td><td class="sblockDat"~~>nbaC, Rmet_5193 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&~~id=~~266264 CUPMC])</td~~><~~/tr>~~	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v27 OCA], [https://pdbe.org/5v27 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v27 RCSB], [https://www.ebi.ac.uk/pdbsum/5v27 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v27 ProSAT]</span></td></tr>
-	~~<tr id~~='~~activity'><td class~~=~~"sblockLbl"><b>Activity~~:~~</b~~></td><~~td class~~=~~"sblockDat"><span class~~=~~'plainlinks'>[http~~:~~//en.wikipedia.org/wiki/3~~-~~hydroxyanthranilate_3,4~~-~~dioxygenase 3~~-~~hydroxyanthranilate 3,4~~-~~dioxygenase]~~, ~~with EC number [http://www.brenda~~-~~enzymes.info/php/result_flat.php4?ecno=1.13.11.6 1.13.11.6]~~ </~~span~~></td></tr>	+
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5v27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v27 OCA], [~~http~~://pdbe.org/5v27 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5v27 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5v27 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5v27 ProSAT]</span></td></tr>	+
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/3HAO_CUPMC 3HAO_CUPMC]] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.[HAMAP-Rule:MF_00825]<ref>PMID:15909977</ref>	+	[https://www.uniprot.org/uniprot/3HAO_CUPMC 3HAO_CUPMC] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.[HAMAP-Rule:MF_00825]<ref>PMID:15909977</ref>

	==See Also==		==See Also==
Line 19:		Line 17:
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~3-hydroxyanthranilate 3,4-dioxygenase]]~~	+	[[Category: Cupriavidus metallidurans CH34]]
-	~~[[Category: Cupmc~~]]	+
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: Dornevil, K]]	+	[[Category: Dornevil K]]
-	[[Category: Liu, A]]	+	[[Category: Liu A]]
-	[[Category: Liu, F]]	+	[[Category: Liu F]]
-	~~[[Category: Hao kynurenine cupin dioxygenase]]~~	+
-	~~[[Category: Oxidoreductase~~]]	+

OCA at 08:01, 27 November 2019

2019-11-27T08:01:43Z

←Older revision		Revision as of 08:01, 27 November 2019
Line 1:		Line 1:

	==2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans==		==2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans==
-	<StructureSection load='5v27' size='340' side='right' caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>	+	<StructureSection load='5v27' size='340' side='right'caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupmc Cupmc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V27 FirstGlance]. <br>		<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupmc Cupmc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V27 FirstGlance]. <br>
Line 12:		Line 12:
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/3HAO_CUPMC 3HAO_CUPMC]] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.[HAMAP-Rule:MF_00825]<ref>PMID:15909977</ref>		[[http://www.uniprot.org/uniprot/3HAO_CUPMC 3HAO_CUPMC]] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.[HAMAP-Rule:MF_00825]<ref>PMID:15909977</ref>
		+
		+	==See Also==
		+	*[[Dioxygenase 3D structures\|Dioxygenase 3D structures]]
	== References ==		== References ==
	<references/>		<references/>
Line 18:		Line 21:
	[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]		[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]
	[[Category: Cupmc]]		[[Category: Cupmc]]
		+	[[Category: Large Structures]]
	[[Category: Dornevil, K]]		[[Category: Dornevil, K]]
	[[Category: Liu, A]]		[[Category: Liu, A]]

OCA at 06:36, 18 April 2018

2018-04-18T06:36:37Z

←Older revision		Revision as of 06:36, 18 April 2018
Line 3:		Line 3:
	<StructureSection load='5v27' size='340' side='right' caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>		<StructureSection load='5v27' size='340' side='right' caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V27 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cupmc Cupmc]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V27 FirstGlance]. <br>
	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>		</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5v28\|5v28]], [[5v26\|5v26]]</td></tr>		<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5v28\|5v28]], [[5v26\|5v26]]</td></tr>
		+	<tr id='gene'><td class="sblockLbl"><b>[[Gene\|Gene:]]</b></td><td class="sblockDat">nbaC, Rmet_5193 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=266264 CUPMC])</td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxyanthranilate_3,4-dioxygenase 3-hydroxyanthranilate 3,4-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.6 1.13.11.6] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxyanthranilate_3,4-dioxygenase 3-hydroxyanthranilate 3,4-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.6 1.13.11.6] </span></td></tr>
	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v27 OCA], [http://pdbe.org/5v27 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v27 RCSB], [http://www.ebi.ac.uk/pdbsum/5v27 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v27 ProSAT]</span></td></tr>		<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v27 OCA], [http://pdbe.org/5v27 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v27 RCSB], [http://www.ebi.ac.uk/pdbsum/5v27 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v27 ProSAT]</span></td></tr>
Line 16:		Line 17:
	</StructureSection>		</StructureSection>
	[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]		[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]
		+	[[Category: Cupmc]]
	[[Category: Dornevil, K]]		[[Category: Dornevil, K]]
	[[Category: Liu, A]]		[[Category: Liu, A]]

OCA at 05:01, 8 March 2018

2018-03-08T05:01:35Z

←Older revision		Revision as of 05:01, 8 March 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry~~ 5v27 is ~~ON HOLD until Mar 02 2019~~	+	==2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans==
-		+	<StructureSection load='5v27' size='340' side='right' caption='[[5v27]], [[Resolution\|resolution]] 2.35Å' scene=''>
-	~~Authors~~: ~~Dornevil~~, K., ~~Liu~~, F., ~~Liu~~, A.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5v27]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V27 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V27 FirstGlance]. <br>
-	~~Description~~: 2.~~35 angstrom crystal structure~~ of ~~P97V~~ 3-hydroxyanthranilate-3,4-dioxygenase ~~from Cupriavidus metallidurans~~	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='related'><td class="sblockLbl"><b>[[Related_structure\|Related:]]</b></td><td class="sblockDat">[[5v28\|5v28]], [[5v26\|5v26]]</td></tr>
		+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/3-hydroxyanthranilate_3,4-dioxygenase 3-hydroxyanthranilate 3,4-dioxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.6 1.13.11.6] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v27 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v27 OCA], [http://pdbe.org/5v27 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v27 RCSB], [http://www.ebi.ac.uk/pdbsum/5v27 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v27 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/3HAO_CUPMC 3HAO_CUPMC]] Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate.[HAMAP-Rule:MF_00825]<ref>PMID:15909977</ref>
		+	== References ==
		+	<references/>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: 3-hydroxyanthranilate 3,4-dioxygenase]]
		+	[[Category: Dornevil, K]]
	[[Category: Liu, A]]		[[Category: Liu, A]]
	[[Category: Liu, F]]		[[Category: Liu, F]]
-	[[Category: ~~Dornevil, K~~]]	+	[[Category: Hao kynurenine cupin dioxygenase]]
		+	[[Category: Oxidoreductase]]

OCA at 11:31, 5 April 2017

2017-04-05T11:31:09Z

←Older revision		Revision as of 11:31, 5 April 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5v27 is ON HOLD	+	The entry 5v27 is ON HOLD until Mar 02 2019

-	Authors: Dornevil, K., Liu, F~~., Esaki, S~~., Liu, A.	+	Authors: Dornevil, K., Liu, F., Liu, A.

	Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans		Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
	[[Category: Liu, A]]		[[Category: Liu, A]]
-	[[Category: Esaki, S]]
	[[Category: Liu, F]]		[[Category: Liu, F]]
	[[Category: Dornevil, K]]		[[Category: Dornevil, K]]

OCA at 19:38, 15 March 2017

2017-03-15T19:38:20Z

←Older revision		Revision as of 19:38, 15 March 2017
Line 3:		Line 3:
	The entry 5v27 is ON HOLD		The entry 5v27 is ON HOLD

-	Authors: ~~Kednerlin~~ Dornevil, ~~Fange~~ Liu, ~~Shingo~~ Esaki, ~~Aimin~~ Liu	+	Authors: Dornevil, K., Liu, F., Esaki, S., Liu, A.

	Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans		Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: ~~Kednerlin Dornevil, Fange~~ Liu, ~~Shingo~~ Esaki, ~~Aimin~~ Liu]]	+	[[Category: Liu, A]]
		+	[[Category: Esaki, S]]
		+	[[Category: Liu, F]]
		+	[[Category: Dornevil, K]]

OCA: Protected "5v27" [edit=sysop:move=sysop]

2017-03-09T15:15:22Z

Protected "5v27" [edit=sysop:move=sysop]

←Older revision

Revision as of 15:15, 9 March 2017

OCA: New page: '''Unreleased structure''' The entry 5v27 is ON HOLD Authors: Kednerlin Dornevil, Fange Liu, Shingo Esaki, Aimin Liu Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthr...

2017-03-09T15:15:20Z

New page: '''Unreleased structure''' The entry 5v27 is ON HOLD Authors: Kednerlin Dornevil, Fange Liu, Shingo Esaki, Aimin Liu Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthr...

New page

'''Unreleased structure'''

The entry 5v27 is ON HOLD

Authors: Kednerlin Dornevil, Fange Liu, Shingo Esaki, Aimin Liu

Description: 2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
[[Category: Unreleased Structures]]
[[Category: Kednerlin Dornevil, Fange Liu, Shingo Esaki, Aimin Liu]]