5x00 - Revision history

OCA at 07:52, 22 November 2023

2023-11-22T07:52:16Z

←Older revision		Revision as of 07:52, 22 November 2023
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	<StructureSection load='5x00' size='340' side='right'caption='[[5x00]], [[Resolution\|resolution]] 3.06Å' scene=''>		<StructureSection load='5x00' size='340' side='right'caption='[[5x00]], [[Resolution\|resolution]] 3.06Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5x00]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X00 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5X00 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5x00]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_M66-2 Vibrio cholerae M66-2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X00 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X00 FirstGlance]. <br>
-	</td></tr><tr id='~~activity~~'><td class="sblockLbl"><b>~~Activity~~:</b></td><td class="sblockDat"~~><span class~~=~~'plainlinks'~~>~~[http://en.wikipedia.org/wiki/Nucleoside~~-~~diphosphate_kinase Nucleoside-diphosphate kinase]~~, ~~with EC number~~ [~~http://www~~.~~brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span>~~</td></tr>	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 3.06Å</td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x00 OCA], [~~http~~://pdbe.org/5x00 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5x00 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5x00 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5x00 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x00 OCA], [https://pdbe.org/5x00 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x00 RCSB], [https://www.ebi.ac.uk/pdbsum/5x00 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x00 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/NDK_VIBCM NDK_VIBCM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.	+	[https://www.uniprot.org/uniprot/NDK_VIBCM NDK_VIBCM] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.

	==See Also==		==See Also==
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	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Nucleoside~~-~~diphosphate kinase~~]]	+	[[Category: Vibrio cholerae M66-2]]
-	[[Category: Agnihotri, P]]	+	[[Category: Agnihotri P]]
-	[[Category: Mishra~~, A K~~]]	+	[[Category: Mishra AK]]
-	[[Category: Pratap~~, J V]]~~	+	[[Category: Pratap JV]]
-	~~[[Category: Dimer]]~~	+
-	~~[[Category: Nucleoside diphosphate kinase]]~~	+
-	~~[[Category: Transferase]]~~	+
-	~~[[Category: Vibrio cholerae~~]]	+

OCA at 07:20, 7 October 2020

2020-10-07T07:20:54Z

←Older revision		Revision as of 07:20, 7 October 2020
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	==Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer==		==Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer==
-	<StructureSection load='5x00' size='340' side='right' caption='[[5x00]], [[Resolution\|resolution]] 3.06Å' scene=''>	+	<StructureSection load='5x00' size='340' side='right'caption='[[5x00]], [[Resolution\|resolution]] 3.06Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5x00]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X00 OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5X00 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5x00]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X00 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5X00 FirstGlance]. <br>
	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>		</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x00 OCA], [http://pdbe.org/5x00 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x00 RCSB], [http://www.ebi.ac.uk/pdbsum/5x00 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x00 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x00 OCA], [http://pdbe.org/5x00 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x00 RCSB], [http://www.ebi.ac.uk/pdbsum/5x00 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x00 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
	[[http://www.uniprot.org/uniprot/NDK_VIBCM NDK_VIBCM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.		[[http://www.uniprot.org/uniprot/NDK_VIBCM NDK_VIBCM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
		+
		+	==See Also==
		+	*[[Nucleoside diphosphate kinase 3D structures\|Nucleoside diphosphate kinase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Nucleoside-diphosphate kinase]]		[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Agnihotri, P]]		[[Category: Agnihotri, P]]

OCA at 05:53, 31 January 2018

2018-01-31T05:53:06Z

←Older revision		Revision as of 05:53, 31 January 2018
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-	'''Unreleased structure'''

-	~~The entry~~ 5x00 is ~~ON HOLD until Paper Publication~~	+	==Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer==
-		+	<StructureSection load='5x00' size='340' side='right' caption='[[5x00]], [[Resolution\|resolution]] 3.06Å' scene=''>
-	~~Authors~~: ~~Agnihotri~~, P., ~~Mishra~~, A.K., ~~Pratap~~, J.V.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5x00]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X00 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5X00 FirstGlance]. <br>
-	~~Description~~: ~~Nucleoside Diphosphate Kinase from Vibrio cholerae~~ is a ~~Thermolabile Type II tetramer~~	+	</td></tr><tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Nucleoside-diphosphate_kinase Nucleoside-diphosphate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.6 2.7.4.6] </span></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5x00 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x00 OCA], [http://pdbe.org/5x00 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x00 RCSB], [http://www.ebi.ac.uk/pdbsum/5x00 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x00 ProSAT]</span></td></tr>
		+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/NDK_VIBCM NDK_VIBCM]] Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Nucleoside-diphosphate kinase]]
	[[Category: Agnihotri, P]]		[[Category: Agnihotri, P]]
-	[[Category: Mishra, A.K]]	+	[[Category: Mishra, A K]]
-	[[Category: Pratap, J.V]]	+	[[Category: Pratap, J V]]
		+	[[Category: Dimer]]
		+	[[Category: Nucleoside diphosphate kinase]]
		+	[[Category: Transferase]]
		+	[[Category: Vibrio cholerae]]

OCA at 15:13, 27 September 2017

2017-09-27T15:13:10Z

←Older revision		Revision as of 15:13, 27 September 2017
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	Description: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer		Description: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Mishra, A.K]]
	[[Category: Agnihotri, P]]		[[Category: Agnihotri, P]]
		+	[[Category: Mishra, A.K]]
	[[Category: Pratap, J.V]]		[[Category: Pratap, J.V]]

OCA at 20:02, 15 March 2017

2017-03-15T20:02:09Z

←Older revision		Revision as of 20:02, 15 March 2017
Line 7:		Line 7:
	Description: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer		Description: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: Agnihotri, P]]
	[[Category: Mishra, A.K]]		[[Category: Mishra, A.K]]
		+	[[Category: Agnihotri, P]]
	[[Category: Pratap, J.V]]		[[Category: Pratap, J.V]]

OCA at 15:31, 9 March 2017

2017-03-09T15:31:31Z

←Older revision		Revision as of 15:31, 9 March 2017
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5x00 is ON HOLD	+	The entry 5x00 is ON HOLD until Paper Publication

	Authors: Agnihotri, P., Mishra, A.K., Pratap, J.V.		Authors: Agnihotri, P., Mishra, A.K., Pratap, J.V.

OCA at 17:07, 1 February 2017

2017-02-01T17:07:38Z

←Older revision		Revision as of 17:07, 1 February 2017
Line 3:		Line 3:
	The entry 5x00 is ON HOLD		The entry 5x00 is ON HOLD

-	Authors: ~~Pragati~~ Agnihotri, ~~Arjun K~~ Mishra	+	Authors: Agnihotri, P., Mishra, A.K., Pratap, J.V.

-	Description: Nucleoside Diphosphate Kinase from Vibrio ~~cholera~~ is a Thermolabile Type II tetramer.	+	Description: Nucleoside Diphosphate Kinase from Vibrio cholerae is a Thermolabile Type II tetramer
	[[Category: Unreleased Structures]]		[[Category: Unreleased Structures]]
-	[[Category: ~~Pragati~~ Agnihotri, ~~Arjun K~~ Mishra]]	+	[[Category: Agnihotri, P]]
		+	[[Category: Mishra, A.K]]
		+	[[Category: Pratap, J.V]]

OCA: Protected "5x00" [edit=sysop:move=sysop]

2017-01-25T22:39:14Z

Protected "5x00" [edit=sysop:move=sysop]

←Older revision

Revision as of 22:39, 25 January 2017

OCA: New page: '''Unreleased structure''' The entry 5x00 is ON HOLD Authors: Pragati Agnihotri, Arjun K Mishra Description: Nucleoside Diphosphate Kinase from Vibrio cholera is a Thermolabile Type II...

2017-01-25T22:39:12Z

New page: '''Unreleased structure''' The entry 5x00 is ON HOLD Authors: Pragati Agnihotri, Arjun K Mishra Description: Nucleoside Diphosphate Kinase from Vibrio cholera is a Thermolabile Type II...

New page

'''Unreleased structure'''

The entry 5x00 is ON HOLD

Authors: Pragati Agnihotri, Arjun K Mishra

Description: Nucleoside Diphosphate Kinase from Vibrio cholera is a Thermolabile Type II tetramer.
[[Category: Unreleased Structures]]
[[Category: Pragati Agnihotri, Arjun K Mishra]]