5y4p - Revision history

OCA at 08:33, 6 December 2023

2023-12-06T08:33:35Z

←Older revision		Revision as of 08:33, 6 December 2023
Line 10:		Line 10:
	== Function ==		== Function ==
	[https://www.uniprot.org/uniprot/Q4DA73_TRYCC Q4DA73_TRYCC]		[https://www.uniprot.org/uniprot/Q4DA73_TRYCC Q4DA73_TRYCC]
		+
		+	==See Also==
		+	*[[Spermidine synthase 3D structures\|Spermidine synthase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>

OCA at 08:21, 22 November 2023

2023-11-22T08:21:47Z

←Older revision		Revision as of 08:21, 22 November 2023
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	<StructureSection load='5y4p' size='340' side='right'caption='[[5y4p]], [[Resolution\|resolution]] 2.16Å' scene=''>		<StructureSection load='5y4p' size='340' side='right'caption='[[5y4p]], [[Resolution\|resolution]] 2.16Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5y4p]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y4P OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://proteopedia.org/fgij/fg.htm?mol=5Y4P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5y4p]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_cruzi_strain_CL_Brener Trypanosoma cruzi strain CL Brener]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y4P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Y4P FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8QO:5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenol'>8QO</scene>, <scene name='pdbligand=S4M:5-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5-DEOXYADENOSINE'>S4M</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2.16Å</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] </span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8QO:5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenol'>8QO</scene>, <scene name='pdbligand=S4M:5-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5-DEOXYADENOSINE'>S4M</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://proteopedia.org/fgij/fg.htm?mol=5y4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y4p OCA], [~~http~~://pdbe.org/5y4p PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5y4p RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5y4p PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5y4p ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5y4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y4p OCA], [https://pdbe.org/5y4p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5y4p RCSB], [https://www.ebi.ac.uk/pdbsum/5y4p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5y4p ProSAT]</span></td></tr>
	</table>		</table>
		+	== Function ==
		+	[https://www.uniprot.org/uniprot/Q4DA73_TRYCC Q4DA73_TRYCC]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
	[[Category: Large Structures]]		[[Category: Large Structures]]
-	[[Category: ~~Spermidine synthase~~]]	+	[[Category: Trypanosoma cruzi strain CL Brener]]
-	[[Category: Amano, Y]]	+	[[Category: Amano Y]]
-	[[Category: Tateishi, Y]]	+	[[Category: Tateishi Y]]
-	~~[[Category: Polyamine synthesis]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 09:10, 21 October 2020

2020-10-21T09:10:53Z

←Older revision		Revision as of 09:10, 21 October 2020
Line 1:		Line 1:

	==Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol==		==Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol==
-	<StructureSection load='5y4p' size='340' side='right' caption='[[5y4p]], [[Resolution\|resolution]] 2.16Å' scene=''>	+	<StructureSection load='5y4p' size='340' side='right'caption='[[5y4p]], [[Resolution\|resolution]] 2.16Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5y4p]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y4P OCA]. For a <b>guided tour on the structure components</b> use [http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5Y4P FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5y4p]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y4P OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5Y4P FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8QO:5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenol'>8QO</scene>, <scene name='pdbligand=S4M:5-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5-DEOXYADENOSINE'>S4M</scene></td></tr>	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=8QO:5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenol'>8QO</scene>, <scene name='pdbligand=S4M:5-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5-DEOXYADENOSINE'>S4M</scene></td></tr>
	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] </span></td></tr>		<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] </span></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5y4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y4p OCA], [http://pdbe.org/5y4p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y4p RCSB], [http://www.ebi.ac.uk/pdbsum/5y4p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y4p ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5y4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y4p OCA], [http://pdbe.org/5y4p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y4p RCSB], [http://www.ebi.ac.uk/pdbsum/5y4p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y4p ProSAT]</span></td></tr>
	</table>		</table>
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
		+	[[Category: Large Structures]]
	[[Category: Spermidine synthase]]		[[Category: Spermidine synthase]]
	[[Category: Amano, Y]]		[[Category: Amano, Y]]

OCA at 21:42, 9 August 2018

2018-08-09T21:42:28Z

←Older revision		Revision as of 21:42, 9 August 2018
Line 1:		Line 1:
-	'''Unreleased structure'''

-	~~The entry 5y4p is ON HOLD until Paper Publication~~	+	==Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol==
-		+	<StructureSection load='5y4p' size='340' side='right' caption='[[5y4p]], [[Resolution\|resolution]] 2.16Å' scene=''>
-	~~Authors: Amano, Y., Tateishi, Y.~~	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5y4p]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Y4P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5Y4P FirstGlance]. <br>
-	~~Description:~~ Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=8QO:5-methoxy-2-[(5R)-5-methyl-4,5-dihydro-1H-imidazol-2-yl]phenol'>8QO</scene>, <scene name='pdbligand=S4M:5-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5-DEOXYADENOSINE'>S4M</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] </span></td></tr>
		+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5y4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5y4p OCA], [http://pdbe.org/5y4p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5y4p RCSB], [http://www.ebi.ac.uk/pdbsum/5y4p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5y4p ProSAT]</span></td></tr>
		+	</table>
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Spermidine synthase]]
	[[Category: Amano, Y]]		[[Category: Amano, Y]]
	[[Category: Tateishi, Y]]		[[Category: Tateishi, Y]]
		+	[[Category: Polyamine synthesis]]
		+	[[Category: Transferase]]

OCA at 07:02, 10 January 2018

2018-01-10T07:02:40Z

←Older revision		Revision as of 07:02, 10 January 2018
Line 1:		Line 1:
	'''Unreleased structure'''		'''Unreleased structure'''

-	The entry 5y4p is ON HOLD	+	The entry 5y4p is ON HOLD until Paper Publication

	Authors: Amano, Y., Tateishi, Y.		Authors: Amano, Y., Tateishi, Y.

OCA: Protected "5y4p" [edit=sysop:move=sysop]

2017-09-27T16:08:08Z

Protected "5y4p" [edit=sysop:move=sysop]

←Older revision

Revision as of 16:08, 27 September 2017

OCA: New page: '''Unreleased structure''' The entry 5y4p is ON HOLD Authors: Amano, Y., Tateishi, Y. Description: Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-...

2017-09-27T16:08:06Z

New page: '''Unreleased structure''' The entry 5y4p is ON HOLD Authors: Amano, Y., Tateishi, Y. Description: Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-...

New page

'''Unreleased structure'''

The entry 5y4p is ON HOLD

Authors: Amano, Y., Tateishi, Y.

Description: Crystal structure of Trypanosoma cruzi spermidine synthase in complex with 5-methoxy-2-(5-methyl-4,5-dihydro-1H-imidazol-2-yl)phenol
[[Category: Unreleased Structures]]
[[Category: Amano, Y]]
[[Category: Tateishi, Y]]