5zc7 - Revision history

OCA at 08:51, 22 November 2023

2023-11-22T08:51:25Z

←Older revision		Revision as of 08:51, 22 November 2023
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	==Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).==		==Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).==
-	<StructureSection load='5zc7' size='340' side='right' caption='[[5zc7]], [[Resolution\|resolution]] 2.00Å' scene=''>	+	<StructureSection load='5zc7' size='340' side='right'caption='[[5zc7]], [[Resolution\|resolution]] 2.00Å' scene=''>
	== Structural highlights ==		== Structural highlights ==
-	<table><tr><td colspan='2'>[[5zc7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZC7 OCA]. For a <b>guided tour on the structure components</b> use [~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5ZC7 FirstGlance]. <br>	+	<table><tr><td colspan='2'>[[5zc7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis_IP_32953 Yersinia pseudotuberculosis IP 32953]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ZC7 FirstGlance]. <br>
-	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene~~></td></tr>~~	+	</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models\|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution\|Resolution]] 2Å</td></tr>
-	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenine_phosphoribosyltransferase Adenine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.7 2.4.2.7] </span></td></tr>	+	<tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[~~http~~://~~oca~~.~~weizmann.ac.il/oca-docs~~/fgij/fg.htm?mol=5zc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zc7 OCA], [~~http~~://pdbe.org/5zc7 PDBe], [~~http~~://www.rcsb.org/pdb/explore.do?structureId=5zc7 RCSB], [~~http~~://www.ebi.ac.uk/pdbsum/5zc7 PDBsum], [~~http~~://prosat.h-its.org/prosat/prosatexe?pdbcode=5zc7 ProSAT]</span></td></tr>	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5zc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zc7 OCA], [https://pdbe.org/5zc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5zc7 RCSB], [https://www.ebi.ac.uk/pdbsum/5zc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5zc7 ProSAT]</span></td></tr>
	</table>		</table>
	== Function ==		== Function ==
-	[~~[http~~://www.uniprot.org/uniprot/APT_YERPS APT_YERPS]] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).	+	[https://www.uniprot.org/uniprot/APT_YERPS APT_YERPS] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).
		+
		+	==See Also==
		+	*[[Phosphoribosyltransferase 3D structures\|Phosphoribosyltransferase 3D structures]]
	__TOC__		__TOC__
	</StructureSection>		</StructureSection>
-	[[Category: ~~Adenine phosphoribosyltransferase~~]]	+	[[Category: Large Structures]]
-	[[Category: ~~Pavithra, G C~~]]	+	[[Category: Yersinia pseudotuberculosis IP 32953]]
-	[[Category: ~~Ramagopal, U A~~]]	+	[[Category: Pavithra GC]]
-	[[Category: ~~Adenine]]~~	+	[[Category: Ramagopal UA]]
-	~~[[Category: Metal mediated assembly]]~~	+
-	~~[[Category: Transferase~~]]	+

OCA at 06:35, 21 February 2019

2019-02-21T06:35:11Z

←Older revision		Revision as of 06:35, 21 February 2019
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-	'''Unreleased structure'''

-	~~The entry~~ 5zc7 is ~~ON HOLD until Paper Publication~~	+	==Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).==
-		+	<StructureSection load='5zc7' size='340' side='right' caption='[[5zc7]], [[Resolution\|resolution]] 2.00Å' scene=''>
-	~~Authors~~: ~~Pavithra~~, G.C., ~~Ramagopal~~, U.A.	+	== Structural highlights ==
-		+	<table><tr><td colspan='2'>[[5zc7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ZC7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ZC7 FirstGlance]. <br>
-	~~Description~~: ~~Crystal structure of APRT from Y~~. ~~pseudotuberculosis with bound adenine~~ (~~P63 space group~~).	+	</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand\|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-	[[Category: ~~Unreleased Structures~~]]	+	<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenine_phosphoribosyltransferase Adenine phosphoribosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.7 2.4.2.7] </span></td></tr>
-	[[Category: Pavithra, G.C]]	+	<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5zc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5zc7 OCA], [http://pdbe.org/5zc7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5zc7 RCSB], [http://www.ebi.ac.uk/pdbsum/5zc7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5zc7 ProSAT]</span></td></tr>
-	[[Category: Ramagopal, U.A]]	+	</table>
		+	== Function ==
		+	[[http://www.uniprot.org/uniprot/APT_YERPS APT_YERPS]] Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis (By similarity).
		+	__TOC__
		+	</StructureSection>
		+	[[Category: Adenine phosphoribosyltransferase]]
		+	[[Category: Pavithra, G C]]
		+	[[Category: Ramagopal, U A]]
		+	[[Category: Adenine]]
		+	[[Category: Metal mediated assembly]]
		+	[[Category: Transferase]]

OCA: Protected "5zc7" [edit=sysop:move=sysop]

2018-02-28T04:53:27Z

Protected "5zc7" [edit=sysop:move=sysop]

←Older revision

Revision as of 04:53, 28 February 2018

OCA: New page: '''Unreleased structure''' The entry 5zc7 is ON HOLD until Paper Publication Authors: Pavithra, G.C., Ramagopal, U.A. Description: Crystal structure of APRT from Y. pseudotuberculosis ...

2018-02-28T04:53:26Z

New page: '''Unreleased structure''' The entry 5zc7 is ON HOLD until Paper Publication Authors: Pavithra, G.C., Ramagopal, U.A. Description: Crystal structure of APRT from Y. pseudotuberculosis ...

New page

'''Unreleased structure'''

The entry 5zc7 is ON HOLD until Paper Publication

Authors: Pavithra, G.C., Ramagopal, U.A.

Description: Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).
[[Category: Unreleased Structures]]
[[Category: Pavithra, G.C]]
[[Category: Ramagopal, U.A]]